LOC110501609 (fam155a)


Basic Information

Item Value
gene id LOC110501609
gene name fam155a
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 24848514 ~ 25013655 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579293.2
AAGTGTTCAAGACGAACATGGCGGCAATTTAACCCAGGTCCAAGATGACTGTGGCCATTGGGAGAAAAGATCCAAGGCATTCAACCCAGATACGAACCGGAAAAAATCAACTGGGGCACAATCAAACGGCTTTTGCTTTCTCATAATTGAATCCGGGAAACTGCAGCAGTAACGGCAACAGCACTGATAAACTGGCCACAGCTGGTCTCTCTGCGCGCGAGCACCACCCCggagagcagaagagagggagcgaggcgCGAGGCATGCGGTTACAGAGAACGTGGTTTCCCCCCGGAGAGCCATGGAGAACGGGGATGCGGCAGCGCGAGGCTTAATCTGTGCGGGCGCGCTAATTGGATCGGAATAACACACCGACGGCGTCTGGCGCGAGAGAGGAGAGCCCAGGACCGGCGGCGGCACGGCAGCCCACCGTTACCGAGGATAAATAACCAGAGTCCATCTCCCAAAGTCAATGAGTATAGTGGCAGAGGAGCCCCCGCGGTGGAGTCGGCCAGAGCTGCGCTTTTCCTAAAATATGACCAGGGGTGCTTGGATGTGTCGGAAGCAAGATGACGGCTTAAAAATCTGGTTTGCACCCCGAGAGAACGAGAAGCCATTTACCGAGTCGGAGCGGGCCCAGAGATGGCGCCTATCGCTGGCCTCTCTTCTCTTCATCACCGTCCTGCTCTCTGATCACTTGTGGTTCTGCGCCGAGGCCAAACTGACGCGGACCCGAGACAAGCGGCAGGACAAGCGGCTCGCCTTTACGGACATGGTCGAGTACCCAAACTCCACTCACCACCACACCCCCTCCTCTGACCCCCATTCCCCCCACGGCCCCCTTGCCAGAAAGCCAGATGTTATTTTTATAGGGAATTCTACCAAACCTCTGTGGCGACTGGACACCTGTCACCCGGACAGCTTGTCCAAAGACTGCTTCACTTTCACGGACGCAGAGCCCGTCTGCCTGGGCCTCTCCCGGGGCGGGGAGAGGACGCAGTCGGCGGACTTGAATCTGAGCGATTTGTATCTTTCTTTTTGTAATTCCTACTctcttttggatttgtttaacggGTTTACAAGTCCGGACAATATAAACTGCAGCCTGGACGTGGCTGAGGGTGACACGCTGGGATGCAGCGAGTGTGTCCGGGTTTACCAGCGCTTTGACCGGCAAGCTCAGGAGGACTACCGGGAGTTTGAGCTGTTGGTTGAGAAATATGAGACTGATGAATACTCGGTCAGGACATGTATGGAGGAATGCAAGATGGTATATAAGCCCTGGCTGTGCTCACAGTACTTCCAGACCACACAGATGCACTGCAGTAAGAGGATCCCGTGTGGCCAGTACTGTCTGGAGGTGCAGCAGAGGTGTCCCTTCATCCTTCCTGACAACGACGATCTCATCCACGGAGGAAGCCCCAGTTTTATATGCACAGGGCTGTTGGAGGAGTACCATGGGGGCGTGGATGCAGACACGGAGTGCTGTGATGTTCGGTGGGACTTCCAGACAGAAGATGACAACAACCATTCCCGGGGGACCCTCAAAAGAACTCACCCATCCTGTCACCACCGTACCTCTCTCAGTTCCTCGGCCGTGTGCAGAGTGTGCAACAGCCGGCTCAAACTCTGCCTGCTAGTCCTTGTCCTCCTGCACACTGTCGCCTCCTTAACCGCATCCCACAATGCAACAGGGCTGGGCCTCCCTGCCTCACTCGCCCCTCTGGAGGAGAGCTCCCCCGCCAACGAGGAGTGATGGGATGGCCGATGATATAGGTTATCACGACAATATGAAACATCTCCGCCTCGGTCGAGAATGCTATGTGCTGTTGGCTAGACGTCTGCAGCCGCTGTGCTTTCTGGGTAATTGAGTCTTTGCAGAGGTGTTGGACTACTTATAAATGGAAGACATGCAAATCAATCAAAGCAAACAGACTTACAAACAAAGAGACGAAAACATGACAGTGTCGGGAACATGGAACAATGCAGCAGCCTTTGTTGAGTAGGAAGGCCTCCTCACTGCTGAGTTTCTCTCGCTGCGCTTTTTTACACTGTTTCCCTGTTCTGGCTTTCTGTTGCACTGGCTGACTACCGGATAACACTCACTGTCCACTTAGAATGTCTATCCTTTATGTTGTTCCTTTATGGGTCTCTAGTGCAGGAAGGAAATGTCTCATTGATATAGGATAGATAACATCAAAAAGCAAAGTTGTGAGTGTCtgcgtatttgtgtgtgtgtgattgtgtgtggatGTCTACTCTGAAGTCTTCACTCATTTGGGTTCCCATTCCTAAAGCGGCTTTAGATGTAGGAAAGGACACTAAAATGTTAGAGTAGTAGTTTGCTCTCATGGTTCTGTGTGGCTAAATTGGTAGAGAATGGTGTTTACACCGCCATGATTGTGGGTTTGactcccacgggggaccagtatgaaaatgtatgcacttactactgtaaattgctttggataagagcatctgctacaATGTAAACAAATTATCCTTGGTAAAAATGAACGTACACCCAGACTACACTACTGGCCAGTGATACAATTGTAATGCTTCTCAATATAGAAGACAACCCCTTGATATAGAAGTATCCTACTAGCCTTTCTCTGTCCCTACCACACACTCTGTCCATGCTCTGTGTCTTCTCAGCCCAGCACTCCACACATAGAAGGTCTATTGTTTGTCTAATCAAAATGTCTTACCTCTATTCTGTACTTGCATGTGGAGGCTCTCTTAATGATGTGAAATTCACAGCCTTGTTGGTTTGCTTTACATAGCCTTAGCCCCCCTCTGTGGTAGAGAACACTACTGCACCCCCAAAACACCACCAGTAAGGTAGCATGTCCTCTGCTTTCTTCAACTAATGTTACTTATCTCACATTGTGTAAAGGGCTTATTTCTATATACAAACACAGACAAAAATGTGCTTGAGGTATGGCTTCAGGTATCTCAGTTCACACTGCATGCTTAGGGGTATACCTTCAAAGGTATGCATTTGCTTAAAAGGTGTTTAATGTGTTGCTATAGAGAGCGGGCAGGTGTAGGACCCAGTATGTAGTATGTTTGAGGAGAAACGTTGGGCGGCACAGTAAGGCTGAGAAGCTCAATGGCATTATGTTAACATTACTGTTAGCATTATGGTTAGTGTGAGCTGGAAGAAAAGGCAATATTTAAGGGCTGTTTTAATCATTTCTTGTCCCTTTGTTTTCTAGCTGATTAACTGAACTGATAGATAGTGGTGCCAGGTATTTTAGGCCTAACAAATGTATGCTGAATGCAGAATTCTCCACTTTCATGTCTGTTGAATATATATGTTAGCCTCCTATTGCTAGGTCCGGCTTGTCAGATTCTACTAGTCAACTACAGGTCCCACAAATTGAGAAACAAATAGAAAACTGGTTCTCTTCTCATTCATTGTTGCATTCTCCATTGTGAGATCTGTCTGTTTACTTGTTGTCTCACTCATAGTCATGCTGCATTCACGACCCTCGGAGTGTTGGGAAATGCAACCTGTAGAGCAATGGAGTTGTGTGCATTCACATGCTTTGAACTCGTTGAGAACACCAACAGGCTAACGTCAAACTAACAATTTCAACCGTAAACATACTTTCATGCTCAAAAACAAATTATAATGTTCAAAAACCATCATATTGATTGTTTttgataaataatgttttgttgttgcatttaactgccgAAAATGCTGTCATCAAAGTATTTTCCTTAGGTGATGTCAGTTCAGCATGTCAGAGCATTTGGGGTCCAGAGATGATACCTGAGTTGCAAGGTTGTAATTAGGATTTGGAAGTTTAGATTACTCCGATAGGTTGTGAATGCAGGATCTGTTCATTTGAACCCATCATCCCATcattcctgtctcctctctggttccatcatcccatcattcctgtctcctctctggttCCTTCATCCCATcgttcctgtctcctctctggttCCTTCATCCCACcattcctgtctcctctctggttccatcatcccatcattcctgtctcctctctggttCCATCATCCCATCATTCCTGTTTCTTCTCTGGTTCCATCATTCCTGTTTCTTCTCTGGTTCCATCATCCCATCATTCCTGTTTCTTCTCTGGTTCCATCATCCCATCATTCTTatttcctctctggttccatcatcccatcattcttatttcctctctggttccttcATCCCATCATTCCTGTTTCTTCTCTGGTTCCATCATCCCATcattcctgtctcctctctggttCCTTCATCCCATTACTCTTatttcctctctggttccatcatcccatcattcttatttcctctctggttccatcatcccatcattcttatttcctctctggttccatcaTCCTATCATTCTTatttcctctctggttccatcaTCCCATCATTCCTGTTTCTTCTCTGGTTCCATCATCCCATCATTCCTGTatcctctctggttccatcatcccatcattcttatttcctctctggttccatcatcccatcattcttatttcctctctggttccatcatcccatcattcctgtctcctctctggttCCATCATCCCATa
>TU2051120
GAGTCCATCTCCCAAAGTCAATGAGTATAGTGGCAGAGGAGCCCCCGCGGTGGAGTCGGCCAGAGCTGCGCTTTTCCTAAAATATGACCAGGGGTGCTTGGATGTGTCGGAAGCAAGATGACGGCTTAAAAATCTGGTTTGCACCCCGAGAGAACGAGAAGCCATTTACCGAGTCGGAGCGGGCCCAGAGATGGCGCCTATCGCTGGCCTCTCTTCTCTTCATCACCGTCCTGCTCTCTGATCACTTGTGGTTCTGCGCCGAGGCCAAACTGACGCGGACCCGAGACAAGCGGCAGGACAAGCGGCTCGCCTTTACGGACATGGTCGAGTACCCAAACTCCACTCACCACCACACCCCCTCCTCTGACCCCCATTCCCC
>TU2051116
TCAACTACAGGTCCCACAAATTGAGAAACAAATAGAAAACTGGTTCTCTTCTCATTCATTGTTGCATTCTCCATTGTGAGATCTGTCTGTTTACTTGTTGTCTCACTCATAGTCATGCTGCATTCACGACCCTCGGAGTGTTGGGAAATGCAACCTGTAGAGCAATGGAGTTGTGTGCATTCACATGCTTTGAACTCGTTGAGAACACCAACAGGCTAACGTCAAACTAACAATTTCAACCGTAAACATACTTTCATGCTCAAAAACAAATTATAATGTTCAAAAACCATCATATTGATTGTTTttgataaataatgttttgttgttgcatttaactgccgAAAATGCTGTCATCAAAGTATTTTCCTTAGGTGATGTCAGTTCAGCATGTCAGAGCATTTGGGGTCCAGAGATGATACCTGAGTTGCAAGGTTGTAATTAGGATTTGGAAGTTTAGATTACTCCGATAGGTTGTGAATGCAGGATCTGTTCATTTGAACCCATCATCCCATcattcctgtctcctctctggttccatcatcccatcattcctgtctcctctctggttCCTTCATCCCATcgttcctgtctcctctctggttCCTTCATCCCACcattcctgtctcctctctggttccatcatcccatcattcctgtctcctctctggttCCATCATCCCATCATTCCTGTTTCTTCTCTGGTTCCATCATTCCTGTTTCTTCTCTGGTTCCATCATCCCATCATTCCTGTTTCTTCTCTGGTTCCATCATCCCATCATTCTTatttcctctctggttccatcatcccatcattcttatttcctctctggttccttcATCCCATCATTCCTGTTTCTTCTCTGGTTCCATCATCCCATcattcctgtctcctctctggttCCTTCATCCCATTACTCTTatttcctctctggttccatcatcccatcattcttatttcctctctggttccatcatcccatcattcttatttcctctctggttccatcaTCCTATCATTCTTatttcctctctggttccatcaTCCCATCATTCCTGTTTCTtctctggttccatcatcccatcattcctgtcttctctctggttccatcatcccatcattcttatttcctctctggttccatcatcccatcattcctgtctcctctctggttACATCATCCCATaattcctgtctcctctctggttccatcatcccatcattcctgtctcctctctggttccatcatcccatcattcttatttcctctctggttccatcatcccatcattcctgtttcctctctggttccatcaTCCCATAATTCATGTCTCCTCTCTGGTTCCATCATCCCATcattcctgtctcctctctggttccatcatcccatcattcttatttcctctctggttccatcatcccatcattcctgtttcctctctggttccatcatcccatcattcttatttcctctctggttccatcatcccatcattcttatttcctctctggttccatcaTCCCACCATTCTTATTTCCTCTCTGGTTCCTTTATCCCATCATTCTTATTTCCTTTCTGGTTCCATCATCCCATCATTCTTATTTCCTTTCTGGTTCCATCATCCCATCATTCTTatttcctctctggttccatcaTCCCATCATTCTTATTTCCTCTCTGTTTCCATCATCCCATCATTCTTATTTCCTCTCTGGTTCCACCACCCCATCATTGCCgtttcctctctggttccacCACCCCGTCATTGCCgtttcctctctggttccacCACCCCGTCATTGCCgtttcctctctggttccatAGCCTGTAATTCCATAGGCCAACAGTAGATTGGGCTCTTGAATAGGTTTATTTCAAGAATGTTTTATAAATTATGAATTAGAGGTAGAATGTCAAATGAAATCCTAGCAAGATTGGACCACTGGAAGATGGGGTCAAAGATAGTCAAAGCAGATGCATTAGGATACAGGAGGCTGAGGTCTTCGGAACCTAGTGataatggaggtgtgtgtgtgtatgttcgaGGGGCTTCTGGTGGCTCACTAATTAGTCAGGTTCAGCACAGAGCCAGTCTTCTCTGGAGACCTCATTAGCATGGCTGTGCCAAGGGGCCTGCAGGTGTGGCGGAAATGTCTTGTTTTTAGAGCCCTCCGGAGACACAACATTAACTAGCCCCATTAATCACTTCTTCCTCTTCATCAGCACCTAACACCTACTGTAAGTCAGCACACAGCATACATACACCTTCATCAGCATTACACCTCTATCAGCCTCTCATCTAGACCTTCATCAGCATTACACCTACAATAGATCTGAACGTCATCTTCTAGTAAACAGACTCGTTCTGTCCATCTGAGAGATGAGTGAAAAGGAGGTTGACAGAGATTCAGAGGGAAGGTAGagaaatggagaaaaaacattAACGGAGGAtgaaatgagaaagagagaggccaaACCCTAAATCAGCGAGTATGTGATGTTACAGTATGCAAGAGAATCCCACACATGGCCAGATTAAAGCCATTGCCCTTTTGGAGAGCTCTAAATAGTATGTCCTGAGAGAAAATAGATATTATCACCAAATATAAGACTATTCTCAGCAGCTACAATACCATTTAGTAAAAGTGCCCTAAAAAGGCTTATGTTAGCATGTTAGCTTCAGTGCTACCCTACTGCATCAAGACAATCCTTATACTGTATCTCCTGACTCTCACTCTTATGTGTGACCCATACCCTGTAGGAGTCTAATACGTTAGTAGGCTACTCCACCAAAAGGAGGCCCAGGAATATTCTAGGAAAATTGCATCTTGTCTTGCTCTTGATTTTTCCATGTTCCATATCTGATATAAGGTCGAGATCCAATGACCTTACAGACCTTGGTGTGATCTGACCCTGAACCAGTATACATTACTATAGCTTTACATCAACACACTAAGTCATGCACATGTAAAAGTCCCTTTTACATGTAGTAATGCATCATGTACTACCAATGGCTGTCCTGGCTGATGACCACAGTATGTGTTCCCCATGCCATCTTTCACTGACAATACTGTGCCATAGACTCACCATAAACGTTACTGTACACAAGCTTTCTCCAAATAAAGATAGACTTTATGAAATTCCACGAATATACGTTTTTCTAATTTCGATATGGTCAATGCAGGCATGTATGCAACTCTGCTGTGATTTGCTAGGTTTGATTCCCTATTATGCTAATGTGGTTTAAGGCCCTATCAATTCAATCTAGATCACAATGACattgatgttgtactgtatgtactatagACCTCCAAATGAGTACCATGACTCAATCTAAAGACATCACATTTATAGTGTTGTGTTCATTGCACATAATTATGTGTTCTTATCCTGACCCACTCTCCCGCTTGTGCAGCTGccttcatatacagttgaagttggaagtttacatacacttaggttgaagtcattaaaactagttttcaaccactccacaaatttcttgttaacaaactatagttttggcaagtcggttaggacatcaactttttgcatgacacaagtaatttttctaacaattgtttacagacagattatttcacttataactcactgtatcacaattccagtgggtccgaagtttacatacactacgttgactgtgcctttaaacagcttggaaaattccagaaaatgatgtcatggctttagaagcttctgataggctaattgacataatttgagtcaattggaggtgtatctgtggatgtatttcaaggcctaccttcaaacgcagtgcctctttgcttgaaatcatgggaaaatcaaaagaaatcatccaagacctcagaaaaataattgtagacctccacaagtctggttcatcgttgggagcaatttccaaacacctgaatgtaccacgttcatctgtacaaacaatagtacgcaagtataaacaccatgggaccacgcagccgtcataccgctcaggaaggagaagcgttctgtctcctagagattaatgtactttggtgcaaaaagtgcaaatcaatcccagaacaacagcaaaggaccttgtgaagatgctggaggaaacaggtacagaagtatctatatccacagtaaaacgagaaaggccgctcagcaaggaagaagccactactccaaaacagtcataaaaaagccagactacggtttgcaactgcacatggggacaaagatcgtactttttggcgaaatgtcctctggtctgatgaaacaaaaatagaactgtttggccataatgaccatcgttatgtttggaggataaagggggatgcttgcaagccaaataacaccatcctaaccatgaagcacgggggtggcagcataatgttgtggggatgctttgctgcaggagggactggtgcacttcacaaagtagatggcatcatgatccaggaaaattatgtggatatattgaagcaacatctcaagacatgggtcttccaaatggacaatgaccccaagcatacttccaaagttgtggcaaaatggcttaaatgacaacaaaatcaaggtattggactggccatcacacagccctgacctcaatcctatagaacatttctgggcagaattgaaaaagtgtgtgctagcaaggaggcctacaaacctgactctgttacaccagctctgtcaggaggaatgggccaaaattcatccaacttattgtgggaagcttgtggaaggctacccaaaacgtttgacccaagttaaacaatataaaggcaatgctaccaaatactaattgagtgtatgtaaacctctgacccactgggaatgggatgaaagaaataaaagctgaaataaaaaattctctactattattctgacatttcacattcttaaaataaagtggtgatcctcactgacctaagacggaattgttactaggattaaatattaggaattgtgaaaaactgagtttaaatgtatttggctaaggtgtatgtaaacttccgacttcaactgtaaatgtctctctttctttttatttatctccctctctctctctctctctctctttagccatGTTTTTGTTATGTCCTGTAGATCTATGCAGAAGCCCATTCCTTTTTTTGGTTGTAAATATGTTCCGTGGAATATTGAACGATGTATCAGTTATGTCTTTTCTTCCAGGTTATCTTGCCTTTTGAGTTGATGTCATATTTCTTTTACTCTTCTTCTTTTATTTTTTCCCCCTTGAGCGTCTGAAATCATTTGTTGCGTTTTTGTCGAAGTAGGAAGAGAATGCGATGGGGCTTAACCAATAGAATTGTCCTCAGATTCACATCTTTATTGAGAGAGGatatgggactgtgtgtgtgtgggagagagagagagaaagaaagctatatgattctaaaaaaaaaaaggttcaaAGGCATATAGAAGTATCATTACAGTTATGGTTATTATGATTACTATTATACTACCGGTATATTGTAATATTATAGATGCTTTAGTTCAGTAACTTCTTTAATTTTTTTACAAACGACTTTGATGAAATGATTTATAAAACAATCTCACAAGTCATGATCTTTTGGAAAAGTAtc

Function

symbol description
fam155a Predicted to contribute to stretch-activated, cation-selective, calcium channel activity. Predicted to be involved in calcium ion import across plasma membrane. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human NALF1 (NALCN channel auxiliary factor 1).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579293.2 False 4584 mRNA 0.48 3 24848514 25008393
TU2051120 False 379 TUCP 0.58 1 24848966 24849344
TU2051116 True 5597 TUCP 0.41 3 25007175 25013655

Neighbor

gene id symbol gene type direction distance location
LOC110501605 LOC106582130 coding upstream 425447 24394068 ~ 24423067 (+)
LOC110501999 LOC106586666 coding upstream 523757 24264331 ~ 24324757 (+)
rab20 LOC106582135 coding upstream 691130 24148044 ~ 24157384 (+)
LOC110502026 ube2al coding upstream 710589 24125893 ~ 24137925 (+)
LOC110502017 LOC106582137 coding upstream 730268 24084901 ~ 24118246 (+)
LOC110501611 pdzd1 coding downstream 146704 25155097 ~ 25162839 (+)
LOC110501614 ox2g coding downstream 185042 25193435 ~ 25223476 (+)
cfap91 maats1 coding downstream 316838 25325231 ~ 25333857 (+)
LOC118943581 NA coding downstream 393086 25401479 ~ 25407741 (+)
LOC110502118 LOC106582051 coding downstream 556275 25564668 ~ 25587687 (+)
G1792021 NA non-coding upstream 19157 24828958 ~ 24829357 (+)
G1792014 NA non-coding upstream 21872 24826365 ~ 24826642 (+)
G1791694 NA non-coding upstream 71053 24710961 ~ 24777461 (+)
G1791697 NA non-coding upstream 130031 24713604 ~ 24718483 (+)
G1791603 NA non-coding upstream 281376 24566902 ~ 24567138 (+)
G1792225 NA non-coding downstream 86318 25094711 ~ 25097888 (+)
G1792226 LOC106582126 non-coding downstream 92457 25100850 ~ 25101639 (+)
G1792232 NA non-coding downstream 98766 25107159 ~ 25107387 (+)
G1792235 LOC106582126 non-coding downstream 100764 25109157 ~ 25109420 (+)
G1792236 NA non-coding downstream 101162 25109555 ~ 25109822 (+)
G1792040 NA other upstream 5229 24842942 ~ 24843285 (+)
G1790805 NA other upstream 729039 24118562 ~ 24119475 (+)
G1790442 LOC106582152 other upstream 1416131 23416093 ~ 23432383 (+)
G1788815 LOC100136012 other upstream 2848891 21998473 ~ 21999623 (+)
G1792649 NA other downstream 286153 25294546 ~ 25296557 (+)
G1793045 NA other downstream 722933 25731326 ~ 25731754 (+)
G1793717 NA other downstream 1307433 26315826 ~ 26316243 (+)
G1795411 NA other downstream 2895189 27898367 ~ 27912875 (+)
LOC110501693 LOC106582057 other downstream 3028535 28036917 ~ 28052019 (+)

Expression


Co-expression Network