LOC110501620 (gpr156)


Basic Information

Item Value
gene id LOC110501620
gene name gpr156
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 25389774 ~ 25416340 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579313.2
gcgaaacacacacacacacacacacacacatttccctcaaTCTCCCACTCTATCTACCCTGCTCATGAAAACTTGTTGCAGACTATACTTTTTCTCCCTGACACCAGGCAACATTTTGGGATAGGCATACTTTGGAGAGTTCTCAGTTGTCATAAAAAGGATTATTTTTCTTCTGGTTGGATTTTTGGAAGGGTTTTACTATAGGTCCCAGTCGTGGAGTTAACTTTCCGGGACAGTTTGTTTCACTTCGTGAGACTCCAGCGATGGTGCGAGGACAGCGGCTAGGCGGAGGGACTCTCCACGCACCCCTCTGACATCCCTCACCGGTTATTTAGGGACTCCGTCAGgatgtgtgtgtgagggctgaCGGTGTGGGTCCAGCCATGGAGCCAGAGTTGAACTGCAGCTCTCACTGTGACTACGGACTCTGCCTCATCCACCCTGGAGTCAATACACAGGAGGACCTGGAGATACTGCAGAGACTATGTACCCTCAGCACGATGGGAGTGGAGCTGCAGAGGCAGTCTCTCTCCCCGGTGCTCTGTGCAGTGGTCTGGACTATTCTCTCCTGTGGCATCCTGCTGGCATTCTGCTTCCTGCTCTTTACCCTGCGCTTCAAGAACAACAGgatAGTGAAGATGTCTAGTCCTAACCTCAATGTGCTGACTCTGTGTGGGAGTGTCCTCACCTACAGCAGTGGATTCCTATTCGCTTTTGAGGAACGCACCCACCTACAAGGGGGAGGAGTGAGAGCTATACTACAGGCCAGGATCTGGATGTTTTGTATCGGCAGCACTCTGGTATTTGGGCCCATCCTGGGGAAAACTTGGCGGCTGTACAGAGTATTCACCCAACGCGTGCCTGACAAGAGAGTGATCATCAGAGACATCCAGTTGATGGGCTTGGTAGCTCTGTTGATTCTGCTGGACATGCTGGTTCTGACCGCCTGGAGTCTAACCGACCCGGTCAAATGTGCTCGGTCCATTGGGGCTATGGTCAAGGTGGTGGAGAGAGAATTGTCCTACTCTCTGTCTCAGCTGGACTCCTGTTCCTCTCTATATTCAGACCTGTGGGTTATCCTCCTCGCTATGATGAAGGGTGGCCTGCTCCTATATGGGACCTACCTGGCCGGTCTGACCAGCAACGTCAGCCTCCCTCCGGTCAACCAGTCCCCCACCATCATGACCGCGGTCAGCCTGGTCACCCTTTCCACGGTGGTTGCAGTCCCAGTGTCGCAGTTCCTGAAGGCCTGGCCTAACGTGGTCTATAGCGTGGTAGCTGGAGCCATCTTCATCTGTACCCTCGCCACCAACTGTATGCTGTTTGTACCTCAGTTAACCCAGTGGCGTCGGTTTGAGGAGGAGCAAAACAGCCTTAGCCAGATGGCAAAGTACTTCAGCAGCCCCAGTAAGAGTGTCCACTCTGTCTACAGCCAGGATGAAGTATACTATCTCCTGGGAGAGAACAACTCTATGAAGAGGCTCCTCAATGAGAAGAATGCTGTAATTGACAGTCTGCAGGAGCAGGTGAACAACGCCAAAGACAAGCTATTGCGCCTCATGTCCAATACCCACTCTCACGAGGATCAGGAAATGGACTCTTCCACCACCaacctccactcctcctccacccaGACCACAGTGGTGCCGTCCGACTGCTTTCCAACTCCCCTGCCACCGAGAGACGTAGCAGAAcctaccctctcttctcctcctttctctctacctcctctctcttctcctccccctcctgcccTCTCTTTTCCCCCAGGGGATTGTGTGAGTGTTAAACCGTGCAGTGTAGAGTTTGGCCCATACATCCAGGgttcagagatggagacagaggcagGGGGTTGTAAGATTGAGGGGACTGTGTCCCAGCAGCAGTGTGGAGTGGAAAGGTCTCACCTCCCAGTCTCCCCTCAGCCCTCTGTTTCTTCCAAGACAGGAGTCAGAACACCAGGGGAGATGGGAGGGACACAAACCACACCCTCCTGTCAGTCAAACTATGTCACTTCCTCATCTACTCTCCCCCTGGTGGGTTCGGCCCCTGCTCAGTCGGAACCGTCAGGTTGCCATGGCGATACCACATCTCCGTGGATGGCAGGTGTCAGGCAGGCAGGGTTTGTGAGCAGTGAGCAGCTGCAGGAGATACTCCAGGAACTGAGCGTGGACACTGTTATGGAAACGGCCCTCCGCTCACCAAATCACAGCAGGGGGTTCAGGAGACCCTCTCAGCCCTCCTCGACcaatccctctgtcctctctcctctctccttctgcacTCCTCATTCCCCCAatcaccctctcctcttccactaCCCCAGTATCTCCCCCTACGTAATGAGGAAACGCAGACCTCCGTTCCATTCCCCCAGAGGGGGGCCTCCGCCCTGTTACTACCCAGGCTCCAAGCCTCCTGgttggggaaggaggagggacacGGGGCTCTCACAACCAGACAAGCACCCCTCAAAAACACAACCTCTGCTCAATCCTGTCGCCACAGAGACTAATCTTCTCCGCCCCGACGACAGTGATGGAGAAGAAGGCGTAGAGGCGTGGCATAGGATAAGAAACAGCTGCGGGAGGCGCGGCTCAAGGCGGGAGCACCGGCCACCACCCCTTCGAAAATGCCCTCCAGATGGTGAtgggggaggtgagggagggcCAGACAGAGACCATGGCAGGGACTCGTATGGTTACTGGGACTCAGACTCCAGCAGCTTGGCTGACTACTCCTACTACCATCGTCCCTACTGCGACGCCTGCCTGCAACACGGCTCATACCCCTCCAGCGACAGCTCCTCCTCAGACTCCTCGGACAGTGAGTATGGCGGCTTCACCAGCCTCTGCCGCTCCACACATCCGGTGGTCAACTTCAAGGAGGACCTCAAACCTACCTTCGTATGAGCCTGCCTGGAACCTAGACTGAACCGGTGCTGCGGAAGAATCATTCAAGTCAAACTGTGTTGTAATTTACTTTCAATGGCCAGTTCACGGCAGAACAATTGAGTTTACACACTGTTGTAACACTATTTAGAAGTGGTAAATTGAGCAGGAACTAATGCTAGAAAAGCTTGCCTGATTTTGAATTCAACAATTTATCTTCCTTATGTATGTGTGGAGTACGAGTACCCTAGCAACACATTACCTCACAGCAATCACATGAAAGGTTTTCTAATTGGTTGCAAGTGCTTTAGAAATGGGACCAAGATGGAGAAAGTCAATCAATGGGTTGAGTTTGCTGTATGATGATTGGGATCTGATTTTAATTTATTGACTTTGTCTTTAACTTATTGCACTGACTGCCATTGTCTCTAGGTCATGTtaaagaaaatgtatatttgtagcTAAACAAGATACAATATTTAGATCATATAGATTGTTGCATGTTACAAAAAAAACCACTGGATTTTATTGATCTGTTACCACCTCTTTTAACCCCCCTACCTTGAATAGAGCCCACCAGGGATGTATGCAGTCACCGTAAAGAATACTATTATAACCATTTTGTCTGAGTTTTTATGATCTTTATGCTTTGGTTTACCTTTTTATACATCAAAACCCCTCAATAACATTGGTCATGTTATTGATTTgagtgttatgtgtgtgtgagtgcgtgcgtgagtgcgtacgtgtgtgtggcatgcatgtgtgtgtgcacaatgTACTGTATTCATTGCATTTTATTTGGAGGCTCTGCCTCCAATTCTATCAATTGTAATTCTCTGTGAGCTGATTGATTATTAAATTACCTATTGACCTTT

Function

symbol description
gpr156 Predicted to enable G protein-coupled GABA receptor activity. Predicted to be involved in gamma-aminobutyric acid signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be part of G protein-coupled receptor heterodimeric complex. Orthologous to human GPR156 (G protein-coupled receptor 156).

NR:

description
probable G-protein coupled receptor 156

GO: NA

KEGG:

id description
K04617 GPR156, GABABL; gamma-aminobutyric acid type B receptor-like

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579313.2 True 3769 mRNA 0.51 9 25389774 25416340

Neighbor

gene id symbol gene type direction distance location
gsk3ba LOC106586650 coding downstream 2296 25344651 ~ 25387478 (-)
LOC110501616 LOC106582122 coding downstream 78007 25299369 ~ 25311767 (-)
LOC110501615 LOC106582053 coding downstream 111142 25273868 ~ 25278632 (-)
LOC118943630 NA coding downstream 155579 25231261 ~ 25234195 (-)
LOC110501612 LOC107389858 coding downstream 212969 25163189 ~ 25176805 (-)
LOC110501622 lrrc58 coding upstream 9032 25425372 ~ 25444103 (-)
LOC110501623 fstl1 coding upstream 28736 25445076 ~ 25503851 (-)
LOC110501625 LOC106582042 coding upstream 237139 25653479 ~ 25658365 (-)
LOC110501627 LOC106582113 coding upstream 293259 25709599 ~ 25744218 (-)
LOC110501630 LOC106582112 coding upstream 353593 25769933 ~ 25789301 (-)
G1792801 NA non-coding downstream 77711 25311816 ~ 25312063 (-)
G1792525 NA non-coding downstream 123976 25221865 ~ 25265798 (-)
G1792571 NA non-coding downstream 198413 25191157 ~ 25191361 (-)
G1793311 NA non-coding upstream 232161 25648501 ~ 25649291 (-)
G1793339 NA non-coding upstream 259723 25676063 ~ 25676470 (-)
G1793374 NA non-coding upstream 316732 25733072 ~ 25733526 (-)
G1793375 NA non-coding upstream 317762 25734102 ~ 25734356 (-)
G1792433 NA other downstream 403506 24985959 ~ 24986268 (-)
G1792345 NA other downstream 531889 24856824 ~ 24857885 (-)
G1792342 LOC106582127 other downstream 540022 24848591 ~ 24849752 (-)
G1791405 NA other downstream 1062647 24326729 ~ 24327127 (-)
LOC110501997 LOC106582152 other downstream 1929414 23368423 ~ 23460589 (-)
G1794978 NA other upstream 1852322 27268662 ~ 27286095 (-)
LOC110501685 LOC106582064 other upstream 2325032 27741372 ~ 27770708 (-)
G1795850 NA other upstream 2564324 27980664 ~ 27981379 (-)
LOC110501691 LOC106582059 other upstream 2593315 28009421 ~ 28019116 (-)

Expression


Co-expression Network