LOC118943581


Basic Information

Item Value
gene id LOC118943581
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 25401479 ~ 25407741 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038801.1
cacacacatgcacattttCACGCCCATGAGGGCCTTAGTCTTAGGCATGGCCATGACAATACCAGTAAGAGGAAGCTCCTCTGTTTCTGCCTAAATACAGAGAAGGAGTGTCTATCTTAGATAGGAGATGATATGGGATGACTCCGCCTATTTGGAAGAAATGAAGATGTGCTTGTGGGACTTGTATGTTGTCTTTGCAGCTTTATGACTCAGTggttgaataaacttggtttgagctttttctAGTCGCCCGTGAGTTTTCTACAGAACCTAACAGTTGCCAATGTTGACAGGATTAACCAATATTTATAGCTGAATTGGAGAGTTCAAATCAGTAGAACAGGAGCCAGCACATAAAAACAAGGTTATGGCAATAGCGACCCCAGACCGTATCTAGATGCATGGAAGGGATTATTCGACCGAGAACAGTGTGAGCCTTACCCCCTCTAACCGGCAGAAGAAATTGAGACAATGATGTTCACTATGACCCTgtcctccaccacctctacctGAGACATGAGTCCGAGCCAGCAAACGGTGTACAGCATCCAGTCGAAGCTATCAATGCCTTTTCTCTCAGGAGCGCAGCATGAGTCCTGAGACCGTCCATgtggagtgagcatggagagagatcaTGTCCAAACTTATCTCATGTTGCTGGTGTACTGGTTGGAAAATGGACAAGACAGAAATGGACAATACAGAATGGACCGTAAAGGTTGGTGGTGAGACATTTGTGTGCTTTGTCTGCTTGGGAAAATCAGATTATTCCCCAGATATTGAAATCGGGGACATTATCAAGGGCCATCCACTTTGACAGGCATGAGTTACATGTGTGCCATTGGGAGGATGAACTGTAAAGCTATCCAATGAAGAAAATGAAGAGACGCCGGACGAATGAGAGCCGGGATGGAGGGGAGTGATCACTGTTCCAGATGAGGGACTGTTGGAAACTGACTAATTGACTTGAGCACGTTTTAGTATGTTTATAACTATATAAGTGGCCTAGCAGTAGTGATCAacgtgttatgggttagatggattgatctatgtgcaaatgtatttgtggCCAGAGGCAAAGTACAAAGGGGGCCTGTCTCTGAGACAGAATGTTTCCATACGGGTGAGATAGGAGTCATATGATAGAGCTAATACTATAGATTGTGAACTATTGCCTTTTAACAGGTCTTATAGCTTCCCTGTTTTAAATTATTGTATTCTCTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038801.1 True 1224 mRNA 0.44 2 25401479 25407741

Neighbor

gene id symbol gene type direction distance location
cfap91 maats1 coding upstream 67622 25325231 ~ 25333857 (+)
LOC110501614 ox2g coding upstream 178003 25193435 ~ 25223476 (+)
LOC110501611 pdzd1 coding upstream 238640 25155097 ~ 25162839 (+)
LOC110501609 fam155a coding upstream 393086 24848514 ~ 25013655 (+)
LOC110501605 LOC106582130 coding upstream 978412 24394068 ~ 24423067 (+)
LOC110502118 LOC106582051 coding downstream 156927 25564668 ~ 25587687 (+)
LOC110501624 LOC106582115 coding downstream 211437 25619178 ~ 25651263 (+)
LOC110501626 LOC106582114 coding downstream 268296 25676037 ~ 25695731 (+)
LOC110501629 ppa6 coding downstream 295155 25702896 ~ 25708893 (+)
LOC110501634 LOC106582107 coding downstream 500102 25907843 ~ 25914106 (+)
G1792647 NA non-coding upstream 39973 25344679 ~ 25361506 (+)
G1792652 LOC106582122 non-coding upstream 92424 25307960 ~ 25309055 (+)
G1792653 NA non-coding upstream 94567 25303526 ~ 25306912 (+)
G1792294 NA non-coding upstream 209693 25191546 ~ 25191786 (+)
G1792290 NA non-coding upstream 214271 25187004 ~ 25187208 (+)
G1792728 NA non-coding downstream 17093 25424834 ~ 25434727 (+)
G1792726 NA non-coding downstream 17539 25425280 ~ 25427178 (+)
G1792941 NA non-coding downstream 138130 25545871 ~ 25546074 (+)
G1792979 NA non-coding downstream 194060 25601801 ~ 25644871 (+)
G1793014 NA non-coding downstream 244626 25652367 ~ 25652905 (+)
G1792649 NA other upstream 104922 25294546 ~ 25296557 (+)
G1792040 NA other upstream 558194 24842942 ~ 24843285 (+)
G1790805 NA other upstream 1282004 24118562 ~ 24119475 (+)
G1793045 NA other downstream 323585 25731326 ~ 25731754 (+)
G1793717 NA other downstream 908085 26315826 ~ 26316243 (+)
G1795411 NA other downstream 2495841 27898367 ~ 27912875 (+)
LOC110501693 LOC106582057 other downstream 2629187 28036917 ~ 28052019 (+)
G1795550 NA other downstream 2683824 28091565 ~ 28092116 (+)

Expression


Co-expression Network