LOC110501623 (fstl1)


Basic Information

Item Value
gene id LOC110501623
gene name fstl1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 25445076 ~ 25503851 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579317.2
ACGCTCCATAACGTTCCTGCGCTCCGGAGATTTTCATTGGTCACGCCATATCGGGGGCAAGACTCGAGACCAGGAATTCCTCAGCGCTCCTCAAATTTCCTGAAATCACAGACCTCTCGCTCGCCTCGGTTACCGATACATTCTGCGCCCACCTCCTCCTCGCAACAGACGTCTGAACAGAGCCGCTTTTCAAAATGATGTTGCAAAGTGTCCCCTTCCTCCTATTGCTGGCCATAGCGCTCTGTCAAACCGAGGAGGTGCAGAGTAAGAGTAAAGTGTGTGCCAATGTGTTTTGTGGAGCAGGAAGAGAGTGTGTCGTCACTGAGAAGGGAGAGCCCAGCTGCTTGTGTATAGAgAGCTGTAAGCCCCACAAGCGTTCAGTGTGTGGCAGTAACAGTAAGACGTACCGCAACCACTGTGAGCTCCACCGAGATGCCTGTCTCACCGGCCTCAAGATCCAGGTGGCTCATGATGGACACTGCCAGGagaagaaagcaGAGCAAGCAGCTGCCAGCCCAGTGGTGTGTTACGTAGCAGACCGTAATGAGTTGAGGCATCGTGTGATCCAGTGGCTGCAGACTGAGGTGGTCCCAGACGGCTGGTTTGTCAAGGGCTCCAACTTTACCGACATCCTGCTCAAATActtcaagAACTACGACAATGGTGACTCCACGCTGGACTCCTCAGAGCTCCTCAAGTTCATCCAACATAATGACTCCAACGTGGACATGCAGTCATACGCAGACCAGGAGAGCAACAAGCTGCTCAgAAGCCTGTGTGTGGACGCCCTGATCGAGCTGTCAGATGAGAACGCTGACTGGAAGCTTAGCTTCGATGAGTTCCTCAACTGCCTGAAGCCCGGCTTCAACCCACCCGAGAAGAAGTGTGCCCTGGAGGATGAGACCTATGAAGATGGGGCCGAGACACAGGTGGAGTGTAAccgctgtgtgtgtgcctgtggcaACTGGGTCTGCACTGCCATGACCTGCACTGACAAGACAGCGGTTGTCAAGGAGACCGGGGAGGCGGGGCAGGAGATGACCGAGGAGGAATGGAGTCTCCGTGTGACCGAGCTTAACAAGCACCAGGAAACAGTGGAGAAGATGAAGGTCAGCACAAAGGAGGCCTAAGAAGCCCAAAGAAGAAGGGCttgagagagagtgcgagagagtcACTCTTCCTCTATACTTGATGTACCTTGAGGCCCTGTGCTGTTGCTGAATTTACTCATATGTTAATTATTATAGCTTTTTTACTGTCTTTCTGTTGATGTTTGTTAGATGCAAGGGCAGTCTAGAGTATTATTTTAGGAGTTCCTTGTGTTAAGTACTGTCTTTATTTGTGATTGTATTACTGCACCCTGCACTAGGAATGGGGCCATTTTTTACTGTTAcagttttcttcttcttcctaTGTATACAATATAGAGACAGTATGGCTCTTGTTAGTAAAATAGCAAGCAGTAATTGTTTGGAATGAGAAAGATGAGAGATGTTAGGAGTGAGCTGTTGGGACAACTTTCTTCATCAAGGAAACAAAATCATCTTGAAAGTCCTTCAAGATGTGTTAGAAGTGTAGAGCAAGACGATGACAGTGTCCTATTGTAGGGGAAGGTAGTGGGATGTCATACACTTGACTTTAAGCTTGTTTGCTTACAGAACTGCCATGATACTACTTGACCAATGCACTTCCCCCTCTGTGACTAGCAGCATAGTTTCAGGCCTTAGTGAATCATCCCGTTTAGTTAGTATGCCCTGCTTTTTGACAAATACACTTGCTCCTATGTACAATTTGTTATATGCTTGAGTTGGAGATCATGTGGTCACAATGGCTCCTGTGCTGTATTCAATCAGTGCTCTCTGGTGCTTGTTTCAGAAACATCGAAGCAATAGTCATCTAGATGTGAATCCCCAAGTAGAATATAGAATGAAAGCACCAAGCACAAAGCTGAACTGAGTACAGCAGGGAGAGAACTGAAACCAAAGCCTGATGATGACTATGATGATGAAATGATGTACGAACCCCTCCAGGTAAAGCATTACTCTGGACCCAGCAACAACACTATACCTGTGCTTATCAAAGATCAGTTATAAGGATTAGCCTTGCTGTCAGCTAACATAACTTAGATGCATCTCTAACTTAGAGGGAATGCATCTGtcagataatgtgtgtgtgtgtgatgagggaGTGTTTTTTGAGAGTGTGAGCTACTAGTGTGTGGCGGTGAGTGTCAtatttgttttatgttttatttgtCAAAATCCCACTCATCCTGAGAATTATTTGTGGTTAAATCAGTGCCTTTAACACCCAAACATAGGCCTGCAGACACACACTGTCGAGGTCttgtgtccaacaagctttaAACCACAAGTGCAATGGGCAAGACTATAATTGGCAGAATTTTTATAGTAACCTTAGAGCTATGTGGTTTAGTCCTTGTTAAATGTTTGTGTAAAAGTTCCATAACTAGTTTGGTTAATAACTTTTTATTCTAAAAGGAATGCAGAGTGTATAAGGAGTATATATGCCAATACAAGACAACCCATACAGTACTACAAATGTCTCAACCTGTGTGTTTATCTTTTATGTTCAAACTGTAATAAATACAAATCTTAAGAcacaaaaaatagaaaa

Function

symbol description
fstl1 Predicted to enable calcium ion binding activity and heparin binding activity. Predicted to be involved in several processes, including endothelial cell differentiation; endothelial cell migration; and regulation of BMP signaling pathway. Predicted to act upstream of or within hematopoietic stem cell homeostasis. Located in extracellular exosome.

NR:

description
follistatin-related protein 1-like

GO: NA

KEGG:

id description
K23912 FSTL1; follistatin-related protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579317.2 True 2637 mRNA 0.45 11 25445076 25503851

Neighbor

gene id symbol gene type direction distance location
LOC110501622 lrrc58 coding downstream 973 25425372 ~ 25444103 (-)
LOC110501620 gpr156 coding downstream 28736 25389774 ~ 25416340 (-)
LOC110501621 gpr156 coding downstream 44100 25396050 ~ 25400976 (-)
gsk3ba LOC106586650 coding downstream 57598 25344651 ~ 25387478 (-)
LOC110501616 LOC106582122 coding downstream 133309 25299369 ~ 25311767 (-)
LOC110501625 LOC106582042 coding upstream 149628 25653479 ~ 25658365 (-)
LOC110501627 LOC106582113 coding upstream 205748 25709599 ~ 25744218 (-)
LOC110501630 LOC106582112 coding upstream 266082 25769933 ~ 25789301 (-)
LOC110501631 LOC106582111 coding upstream 287967 25791818 ~ 25799792 (-)
LOC110501632 LOC106582041 coding upstream 310970 25814821 ~ 25842967 (-)
G1792801 NA non-coding downstream 133013 25311816 ~ 25312063 (-)
G1792525 NA non-coding downstream 179278 25221865 ~ 25265798 (-)
G1792571 NA non-coding downstream 253715 25191157 ~ 25191361 (-)
G1793311 NA non-coding upstream 144650 25648501 ~ 25649291 (-)
G1793339 NA non-coding upstream 172212 25676063 ~ 25676470 (-)
G1793374 NA non-coding upstream 229221 25733072 ~ 25733526 (-)
G1793375 NA non-coding upstream 230251 25734102 ~ 25734356 (-)
G1792433 NA other downstream 458808 24985959 ~ 24986268 (-)
G1792345 NA other downstream 587191 24856824 ~ 24857885 (-)
G1792342 LOC106582127 other downstream 595324 24848591 ~ 24849752 (-)
G1791405 NA other downstream 1117949 24326729 ~ 24327127 (-)
LOC110501997 LOC106582152 other downstream 1984716 23368423 ~ 23460589 (-)
G1794978 NA other upstream 1764811 27268662 ~ 27286095 (-)
LOC110501685 LOC106582064 other upstream 2237521 27741372 ~ 27770708 (-)
G1795850 NA other upstream 2476813 27980664 ~ 27981379 (-)
LOC110501691 LOC106582059 other upstream 2505804 28009421 ~ 28019116 (-)

Expression


Co-expression Network