LOC110501633 (LOC106582109)


Basic Information

Item Value
gene id LOC110501633
gene name LOC106582109
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 25844496 ~ 25891165 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579331.2
AGATCAGGAAGTGCGCTCTCCGTGCTCCAATCGCTCTCTGTGAATCAGCTGAGTTTGGGCTTTCCACCCTGTTGCGTTTAGCATGATCTGCACGAGAGAAATTGGAAACGCACCCCCCCCACCTAACGGTTGGTTGACGGTTTCTCAAAGCTTCAGTTACAGAACGGACGCTACACCCAGAACCGTTAACATTTGCCGGTTTCCCGGGATTTAGTGACATTTATTGGACGCACGCGAATGGTCAGCTCAAACCCGAGCTTGTTTTGCAGTTGACACAGGCTGAGTATGCTGGGGTGTGAGTGAGGCATCATGGATCCCGAGGAGCAGGAGCTGCAGAATGACTACCGTTACCGTAGCTACGCGGCGGTCATCGAGAAAGCCCTGCGGAACTTTGAGTCGTCCAGCGAGTGGGCTgacctcatctcctctctgggCAAACTCAACAAGGCCCTGCAAAGTAACCTGCGCTACTCTCTGCTGCCCCAGAGGCTGATCATTGGGAAGCGTCTGGCCCAGTGTCTGCACCCGGCCCTGCCCAGTGGAGTGCACCTCAAGGCCTTAGAGACCTATGAGATCATCTTCAAGATCATCGGCACCAAATGGCTGGCCAAGGACCTCTTCATCTACAGCTCAGGACTGTTCCCGTTGCTGGGCCATGCTGCGATGGCGGTGAAGCCAGCCCTGTTGACGCTGTATGAGCGCTACTACCTCCCTCTACAGAGGGCCTTACTGCCCAGCCTACAGGCCTTCATCACTGGACTACTGCCTGGCCTGGAGGAGGGGGCTGATGTCtatgacagGACGGATGCGTTGCTACTGAGGCTGTCTCTGTTAGTGGGCCAGCAAGTGTTCTATGGGGCTCTGTGGGGCAGTGTGTTGGTCAGCCCTCTGGTCCGGCTACCCGCCTCTCTCTTCATTGTCACACACTTCGACCGCTTCACCCCACCGCGCCAGCAGAGATGCATGCTGGGCTATAACAACCGCTTGGTGaTGAAGGCGTTGTGTCTGTCTCTGCAGGACTCTAATGTTCTGGTGCAGAGGAACATGTTGGAGATCCTGCTATACTTCTTCTCCTTGGCCACCTGCCTGGATCCAACAGAAGGCAGTATTCCTATGACCAGGGAGGACACGATCACAGTGGTGTCTGCTGCTTCCCTCACGCTGCTCCGCAGAGACATGTCCCTCAACAGACGCCTCTACGCCTGGCTGCTAGGCACAGACATTAAGGGAGGTATGATTGCTGCAGACCCTGACCTCTCCATCTCCATGGAGGAACACACAGCCTTCTACTTCAAGACCCACTCCAGAGAACTCCTAGTGCAGGCTTTGATCAACATCCTGAATCAGAAAGATGTGGAGGCAGACCCGGAGAGCGTGATTGGTTATCTCCGACCCTTCCGCATCATCATCAGCCTAATGGATAAGCCAGAGATAGGTCTTCTGGTGGTGGACAGTGTGTTATTGGAGGCAGTGAGAGCGTTCTACAGCTACTGCAGAGAGATGCTGGGAGAGGAGTCTATCACCAGCACTGGCCTGACGGGTAAACAACTAACCAGTAAAATAAAAGAAAACAAGAATGCGTCAGAGATCATAAAGACAGTGAACATGCTGGTGAGCTCCATGAACAGTGATTTCCTGTGGGATTACATGACCTGCCACTTCTGCACTTGCCTCAGtGGCCTAGCTGACCTGCCGCTACCCACTCTGCAGTATCAGAGtgcctctcctgctccctctgtcACAGAGATCTCCACCCTCATCATATTTCTAATGGATGTTATCCCTctgGAGCTCCATGCTGACATCCAGTCTCAGTTCCTGCCCCAGATGTTGTGTCGCATGCTGCACACGCTCTGCACCCACATGAATACCCTGGACTTATTGGAGCTCACGCAAGGCCTGGACGCCTGCTTCAAGGTGCTCAGTAAGATCCAGATGCCCGTGGCTTATATGGACATGGAGGAGTCACAGACACAGGAAGTGGAGGCACAGGAGGAGAGCTTTGAATATGTTCAgTACAATGACAAGGAAAGTGATGAGGAGGATAATGATGAAGACGCTGGTAAGGTTAATGGTAACCATGACAACACAGAACCAGAGGAAGAACCTAAACTGAATGGGGTTATGGAGCACGAGATTGGTCCAGGAGAGGGAGAAAGCCCCTTCCTGCCCCTTCGGTCTGAAGACAGTGGATTGGGCATCAGCGCCTCGCCGTCAGAGCTGCACCTCCTACCAGGGGCGGGCCTGGGCCCTGAGGAGGCAGGGATTGTGAAAGAGAGCGAGGGTGTGTGGAGGAAGGGGGGCAGTGTGGAGACCATAACCCAGTATCTGCAGGATATCCTGGCCTTCATCatcagcaggTACCTGCTCGTTCAGGTGGAGGATGTCAGGGGGCAGGAGGAGGCTGTACAATCCGACCCCGCTGCCCTCTCCCCTGGTCGGAAGTCCTCGTTCCGGGAGGGCCCTCAGATCACCACCACCCAGATCAAAGACAAGCTAGCCGAGCTCTTCACCCCCAACAAACACAAACCACGTGCCACCTCAGACCCCCCTGTCCCAGACCCCCctacagagaggaagaaggggcGAAGGTGTGCGGGAGGAGGGGTGGACTGGGGGGCAGGGTACATGCCCCGGAGCAGAGCGGAGATTTCGGAGGAGTGTCGACAGGCGTTCACGGCAGCGTGCCACCTTCTGTTGGAGTCTACCACCTTCCCCCTGTACCTGAGTGAGGGGGAGAGCCATGGGCTCTATAATGACATGTTCAACCATACAGGCAGTGACGTAGACAGCCTGCCTgtgtggctgaggtccttgatgactCTGTGTTGCCTGTCGAGGGACTACCACGTGCAGCACACGGCCATGTCGTCTCTGCTGGAGCTCATCAACCACTCACGGTCCCTGGCCCTGGTCATTCAGGACAAGACCAGGCGCTACCAGGCCAGCGACGCTAACCCTCTCAGTGGGCGGCTGCAGATGGTCACTATGCCCCCCATCTACCCAGGTCTGCTAAGCACCATCGAGCAGGGCACAGACTTCTACCAGCGGGTGGCCCAGGTGCTGTGGTGTCAGCTGGACATGGAGCGTCGAGAGCAGCACACCTCCTGTGTAGAGCTCTTCTATCGGCTCCACTGCCTGGCCCCCTCCGCATCCATCTGTGAGGACATCATCTGCCAGGCTTTATTGCACAGAGACAAGGCTGTACGGTTGGAGGCCCTACACAGGTTCTCAGTGCTGTGGCACCTGACCAGGGACATCCAGTCAAACCGGACCATGTCTATGAACCGCTCATTTGACCGgtctctgtgtgtggtggtggACTGTCTGAACAGCCCAGATGGTTCTGTGAGTgctgcagcccagtgctggctggTCAGGGCTCTCTCCATGCAGGACGTGGTCCGCATCCTGGAGCctgttctgctgctgctgctccacccctccacccagcGCTGCACCATCCAGAGTGTCAAACAGAACCTCACcgcaggtATTCTGAAAGATTTAAAGAGCAGAATTCAAAGCACTACCAACGGTTACGCGAACGCCATAACAACCAGCACCCAAACAGATGAAGGTACACTGGGTCACATGATCCTGGTGGACCGGGAGGCCCTGTGGGGGGAGCTAGAACATGACCCGGAGACAACCCAACCGCCGGCCGACTCCACGGGGGTGTCTCGCAGCGATAGCGAAGCTACAGAGGAAGAAGACGAAccggaggaagtggaggaggaggagagtgtacACACCGAGTCGAGCGGCGTCCAGGTCTCCACTGAGAACTCTAGCTCTGGCTCCGCCCCTTACGGTAGTAGTGTAGAAGAAGGAAGCATGGTCAACGGCCTGAGGAGGATGGAATCGGAACACACGCAGGCATCCGATTCGCTGtcgagcgaggaggaggaggacttgGAGCTTGAAGCCATGGCTCGGTCACGTCTCCTCAAACAGGAGCGTGAGAAGCGGGAAGCCATCGACTCTATGTTCCGCCATGTTCTGCTGTACTCTGTGGCCGGCGGCTGGCCCCGTCTGCTCCACGGCCTGGCCCTGCTGGACAGCCTGTTGAGGAGCAGTGCCCAGCAGCCTCTAGTGAAtgccctctcctccacctccctggACACCAGCTCAGCTGCACACCTCAATCTGGTCTCCAACCTGCTCCAGCGCCACCAGCAGGCCCAGGACGGAAGAGGCTTCTACGGACGCCTACTCTCgccctccagtcccctctccctgctcatCGAGCTGATGGTGTCCCTGTGCCTGAAGTTCCTGCGCTCCCACTACCCATCCTACCTCACTCTGGACCCCAGGGAGCTGCAGGGGAACAGGGAGGTCCAGGTGAAGAGCGTGGGGGTGCTGACCCGCCTGGTGACCCAGCTGGGGATCGTGGCGCGGGGCCAGGGAGACACCTCCACGCAGGGGGAGGCTGGCGTCAGCCCAGAGCCCATCTGTAAGCTGCTGGCCAGGTGTAAGGTGCAGCAGTAcgccctcctcaccctctcagCCTCCATGTACATTAGCCAGAGAGGAACGGAGAAGGGCTCTGCCATGGGGGGTGTAGATCTGTTAGATGAACAGGTGGGTCTGTCTGAGGAGAGCCTGGTGAatctgggagggggagggggacaaGAGCAGTACCCCTTACAGATGGAGCTGCTCAAGCTCCTACAGGCCCTCATCGTCCTGGAGTACCACGTGTGGCCAGGGGAGTCTGGTTCGACCCTGCACTCCGATGAGCCCCGTGACTCCCCTGCCTCCTCAGCACTAGCACGGGAATGGCAGACAGCGGTTCTGTTCCAACAGTCCATCAAGGCAGCTCAGTACGTCCAAACCCAGCCCATCACAGCCCAGGGGATTTTGTCTGCTGCAGCCCGGGCTTTGCAGCCGCAGTACGGCTATGCCATGCACCCCCACTGGGTGGCGCTGCTTTGCTCGTCTCTGCCCTACCTGGGGCGCTCGCTGGGCATCATCGTGGCTCCTCTCATCACTCAGATGTGCAGGAACCTGGACGAGCTGGTCAAACAGTACGATCACGACGGGGGGAAGGCTACACAGAGTCTGATTGGCAGGAAGGAGAACATCGCTCCTGATTATCCTCTCACCCTACTGGAGGGACTGACCACACTCACTCACCACTGTCTACTGGACAACAAGAAGTCCCTGGTGGCTTGTGACCCTGCAGACGTCCGGAACGCCCGCAACGCTGTGATTGAGGAGCTGCCGCACATGCTCAGTAGCATGGCTCTGCTGTGGGGTGTGGTCAAGAGGGAGGAGTCCCAGAGTAGGGGCTCGGACTATTCCCAGACCGCCAGACACACCTCTACTTCTGTCTACTTCAGGAGCTCCaagaccctGAGACAGCGTGTGTTGGAGTTCCTGACTCCTCTGACGGGGCAGTACGGGGTGCAGCTAATGGCCTCAGTGGGAGCTGTGTGGAGCAGccggaggaacaggaggagacacACCAAAAACAAAATCTTACCTGTGGCCAGTGAGTCTCGTCTGACCATCGTGGATCTGGTGAAGTCCCTGGGCACTCTCAGTACAGAACATATCCTGCAAATGGTCAAAGAGGTGGTGAAAAAACCCCACCAGATCAAACGAGACCAGAAGTCCACCCTGGTAGACATCCCCATGCTACAGTTCAGCTATGCCTACATTCAGAGTATTCCGGCACAGGCGCTCCAGGAGAACATGGCGCCCCTCCTCACTCTTCTCAGAGAGTCTGTGCAGCTCAACCTGGCCCCGCCCGGACACTTCCTGCTGCTGGGAATCCTCAATGACTTTGTAAACCGGCTCCCCAACCTAGACAATAAGAAGTACACTAGGGATATGCAGGAGGTGACCCAGAAGATCCTAGAGGCTGTGGGCGGGGTGGCGGGGTCGTCTCTGGAGCAGACCAGCTGGCTCAGCCGTAACCTGGAGGTCAAGAACCAGCCTcaggtgtgtcctgagacagaggaGCCATCCGACGAGCTGGACCTGGACCTCTATGACTCTGAGGCTCAGGCCAGCACCATGGTCTCTTCCTCAGCCCCTTCTGTGTACAGTGTGCAAGCCCTAGTGCTATTGGCAGAGGTTCTAGCCCCTCTCCTGGACATGGTGTATCGCAGTGATGAGAAGGAGAAAGCCGTCCCTCTCATCTCTCGCCTCATGTACTACGTCTTCCCCTACCTGAAGAACCACAGTGCCTACAACATGCCCAGTTTTGGTGCAGGTGCCCAGCTTCTGAGCAATCTGAGTGGGTACGCCTACACCAAGAGGGCCTGGAGGAAAGAGGCCTTCGAACTCTACATGGACCCCCTCTTCTTCACCATGGACGTCTCCTGCACCCCCCACTGGAGGTCTATCATCGACCACCTGCTGACCCATGAGAAGACCATGTTCAAAGACCTCATGAGCATGCAGAGCAGTTCTCTGAAGCTGTTTCCCAGTGTAGAGCAGAAGCCCATGTTACTGAAGCGTCAGGCCTTTGCTATGTTCAGTGGAGAGTTAGACCAGTACCACCTCTACCTGCCCCTCATCCAAGAGCGGCTGACAGAGGCTCTGCGTATGGGTCAGACGCCCTCCGTCTCTGCTCAGATGTTTCTGACATTCCGTGTTCTTGTGCTGCGGATCTCCCCCCAGCACCTCACCTCCCTCTGGCCAATCATGGTCACAGAACTGATCCGAATATTTGTTCGGCTGGAAAAAGCCTTGTTGGAAGAAAAAGAGGTGTCAAAGTTGACTAAAGTTGTACGTGGGGCCATGGGGAATGGGCCATTGGCTTTCCCCCAGCCAGAGTTGGACATGTACCTGTCtgcctgcaagttcctggacaccGCCCTGGCCTTCCCCACAGAGAAGATGCCCCTCTTTCAGATgTATCGCTGGGCCTTTGTTCCAGAAGTGGATATGAGCTGCTACAGTGGCCCAGAGAATAGTATCCTGGAGGGAGAGCAGGAGTGCAAACCCCATATTGTCAAAGTACTAGAGGCACTACACCAACGCTACGGAATGCTGAACGGGCTGAGCGAGGAGTCCTCTACGGAGCATCTGGAGTTCCCCCTCCTCACCCGTCGCTTTCTCACCTCCATCACCCAGCTTGCTCCCTTCCTCCATACACTCTGCTGTTCCTTCCAGGGCACTTCACCCAGCAGCCCTCCAGATTACCCTGTGACAGACTACCCTCTAGCCAACGCTGACCAAGTCCTGAAGAGACTGGAGCACATCACTGAGGAAGAGTTCCTAGACTCCATGGAGAGTTAGTACTCCACCAAGGATCTAGATCTTAGAACGTAGAGGAAATGAGAACTAGAACCATAGAAATTGAATGTGTAGAATGGGCACAACCACTGAAAGCGATGTTGTATTGTAGGCATATGCCAGCTAAATGGTCATCTTTTGGGATGTTCTTTTGAATTTTGAATTGTTTACCTTACTTGGTTGAGATTTAACACGTCTATATAGGATATTCTACATTTTGAGATACTCTAAAATAATCTAGAATTAACTGACACAAACTGGAATGgcagttggggcggcaggtagcctagtggttagagcgttggacttgtaaccgaaaggttgcgagatcgaatcaccgagctgacgaggtaaaaatctgtcgctctgccactaaacaaggcagttaacccactgtgcctaggccgtcattgaaaataagaatgtgttcttaactgtcttgtctagttaaaaatacattttgaaaattaGGCTCTCTCTGAGTACAAGTCTGAATGTGCTGACTTAAAATAAGAGTAGTACTGATACTAGCTAGCTTTTTGAGGTGACACTGGTCATAAAAGAAGCACCACTGTAACCAAAGAGTGGGACAGCAGTACTGACTACTAATTGCTCTGCAAAGCTGCTCCCTACTATTAGCATATGTTGTAATATATTCCAATGAGACAGGAGTAGATGAGTATACCTGCTGGTCAGTGACTATGGGACCTCTAAGGCTTTTAATAGAGGATGGTTgatttttttatgtttaaaaaGCTCTGCTTGTCATCAATCATGTCACAGTTTTTTATTTGTGGGTAAATTCTTTAATGTGATTTGTGTGCACAGTAATACCTCTAGATATCTAATAAGTTAAATAATGTGTGGTATCTGTTCATGGGGAGTCTCTATTTTTAGGTGTTTTGTGGAATGTTTGGACATATGGTGCTTTCAAAGCAAATCAGAATCTCTGAAATTTGACTTGGAAACTAGTTGTAGAATGATGAGGCCCAAGTTTCTAGAGTCAACCAATAGGAAGCTCTATGCAAACAAATGTAAATTAACTCAGAGGTTCAGTTTACCACTTGTCATGAATACACCATTACCACTCAACACAATTTTATTCTTCAAATGTGAATGCTTAACTAAACTATGTAAATGTTTGACCTCCTGAAAATGATTACTTGTTAATATCCAAATTAATATATCATGGTCtgcaaataaaaacatttaaaaatgtc

Function

NR:

description
protein dopey-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579331.2 True 8474 mRNA 0.54 37 25844496 25891165

Neighbor

gene id symbol gene type direction distance location
LOC110501632 LOC106582041 coding downstream 1529 25814821 ~ 25842967 (-)
LOC110501631 LOC106582111 coding downstream 44704 25791818 ~ 25799792 (-)
LOC110501630 LOC106582112 coding downstream 55195 25769933 ~ 25789301 (-)
LOC110501627 LOC106582113 coding downstream 100278 25709599 ~ 25744218 (-)
LOC110501625 LOC106582042 coding downstream 186131 25653479 ~ 25658365 (-)
LOC110501636 LOC100194724 coding upstream 6595 25897760 ~ 25904394 (-)
LOC110501638 LOC106582105 coding upstream 53968 25945133 ~ 26001224 (-)
LOC110501639 LOC106582104 coding upstream 119776 26010941 ~ 26013975 (-)
LOC110501642 LOC106582101 coding upstream 232605 26123770 ~ 26224797 (-)
LOC110502076 LOC106582039 coding upstream 403295 26294460 ~ 26299908 (-)
G1793356 NA non-coding downstream 30781 25811335 ~ 25813715 (-)
G1793361 NA non-coding downstream 36693 25806417 ~ 25807803 (-)
G1793380 NA non-coding downstream 103463 25740701 ~ 25741033 (-)
G1793377 NA non-coding downstream 106708 25737529 ~ 25737788 (-)
G1793376 NA non-coding downstream 107149 25737053 ~ 25737347 (-)
G1793433 NA non-coding upstream 28105 25919270 ~ 25919512 (-)
G1793593 NA non-coding upstream 229420 26120585 ~ 26120802 (-)
G1793594 NA non-coding upstream 230213 26121378 ~ 26121658 (-)
G1793720 NA non-coding upstream 238366 26129531 ~ 26129770 (-)
G1792433 NA other downstream 858228 24985959 ~ 24986268 (-)
G1792345 NA other downstream 986611 24856824 ~ 24857885 (-)
G1792342 LOC106582127 other downstream 994744 24848591 ~ 24849752 (-)
G1791405 NA other downstream 1517369 24326729 ~ 24327127 (-)
G1794978 NA other upstream 1377497 27268662 ~ 27286095 (-)
LOC110501685 LOC106582064 other upstream 1850207 27741372 ~ 27770708 (-)
G1795850 NA other upstream 2089499 27980664 ~ 27981379 (-)
LOC110501691 LOC106582059 other upstream 2118490 28009421 ~ 28019116 (-)
G1796204 NA other upstream 2443059 28334224 ~ 28334621 (-)

Expression


Co-expression Network