LOC110501636 (LOC100194724)


Basic Information

Item Value
gene id LOC110501636
gene name LOC100194724
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 25897760 ~ 25904394 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579335.2
GTTTCCCATAATGCTTCTCGCTTCAGAATATACGTGTTTCTTTTGCGACCAGCTTTCATGCGCAGAAGTTGACCTACAGTCTGAAAAAAATGGCAGCATTAGGACTGGGGCTGCAGGTGCGTCAATTCAGCACGTCGGTTCTCCGACAAGCATTGATCAGGCCCCCTATCGACGTGTATGGGGTCGGAGGTCGCTATGCCACAGccctgttctctgctgccagcAAGCAGAAGAAACTGGAACAAgtagagaaggagatgaggacgTTGTCGGCTCTGATCAAGGACCCCAAGCTGTCCAGTATTGTGATGAACCCTCATGTCAAGCGCAGCCTCAAGCTGAAGTTCTTTGGTGATGCCATGACGAAGGCAAATCTCTCCCCAATATCAGTTAACCTCATCActgTGTTGGCAGATAATGGCCGTCTGACCCTGACCGCAGATGTAGTTGGCGCCTTTGCGAAAATGATGAGCGCTCACCGTGGCGAGGTCATCTGCACTGTCACCACCGCACATCCCCTGGATGAGGCTAACCTGGCAGAGCTGAAGGTGGCTCTGAACGGCTTCCTGGCAAAGGGAGAAACACTCATATTAGAGACCAAGTCTGATGCCTCCATCCTGGGTGGTATGATTGTCAGCATAGGAGATAAGTATGTGGACATGTCCACCAAGACAAAGATCCACAAACTGACCAAGATCATCAGAGATAGTTAAGTCCATTGTCCATTCCAGAGAGTCATGGGAATGTTTCTCTGCTTCCTGCCACCTATACAGCGCTATGTCCGCTAAAATCCTGTCTAGTTGTGTTCGTAATAAAATATTCTGTAACATACAAA

Function

NR:

description
ATP synthase subunit O, mitochondrial-like

GO:

id name namespace
GO:0006200 obsolete ATP catabolic process biological_process
GO:0015986 ATP synthesis coupled proton transport biological_process
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism molecular_function

KEGG:

id description
K02137 ATPeF0O, ATP5O, ATP5; F-type H+-transporting ATPase subunit O

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579335.2 True 835 mRNA 0.49 7 25897760 25904394

Neighbor

gene id symbol gene type direction distance location
LOC110501633 LOC106582109 coding downstream 6595 25844496 ~ 25891165 (-)
LOC110501632 LOC106582041 coding downstream 54793 25814821 ~ 25842967 (-)
LOC110501631 LOC106582111 coding downstream 97968 25791818 ~ 25799792 (-)
LOC110501630 LOC106582112 coding downstream 108459 25769933 ~ 25789301 (-)
LOC110501627 LOC106582113 coding downstream 153542 25709599 ~ 25744218 (-)
LOC110501638 LOC106582105 coding upstream 40739 25945133 ~ 26001224 (-)
LOC110501639 LOC106582104 coding upstream 106547 26010941 ~ 26013975 (-)
LOC110501642 LOC106582101 coding upstream 219376 26123770 ~ 26224797 (-)
LOC110502076 LOC106582039 coding upstream 390066 26294460 ~ 26299908 (-)
LOC110501645 LOC106582048 coding upstream 412841 26317235 ~ 26321085 (-)
G1793356 NA non-coding downstream 84045 25811335 ~ 25813715 (-)
G1793361 NA non-coding downstream 89957 25806417 ~ 25807803 (-)
G1793380 NA non-coding downstream 156727 25740701 ~ 25741033 (-)
G1793377 NA non-coding downstream 159972 25737529 ~ 25737788 (-)
G1793376 NA non-coding downstream 160413 25737053 ~ 25737347 (-)
G1793433 NA non-coding upstream 14876 25919270 ~ 25919512 (-)
G1793593 NA non-coding upstream 216191 26120585 ~ 26120802 (-)
G1793594 NA non-coding upstream 216984 26121378 ~ 26121658 (-)
G1793720 NA non-coding upstream 225137 26129531 ~ 26129770 (-)
G1792433 NA other downstream 911492 24985959 ~ 24986268 (-)
G1792345 NA other downstream 1039875 24856824 ~ 24857885 (-)
G1792342 LOC106582127 other downstream 1048008 24848591 ~ 24849752 (-)
G1791405 NA other downstream 1570633 24326729 ~ 24327127 (-)
G1794978 NA other upstream 1364268 27268662 ~ 27286095 (-)
LOC110501685 LOC106582064 other upstream 1836978 27741372 ~ 27770708 (-)
G1795850 NA other upstream 2076270 27980664 ~ 27981379 (-)
LOC110501691 LOC106582059 other upstream 2105261 28009421 ~ 28019116 (-)
G1796204 NA other upstream 2429830 28334224 ~ 28334621 (-)

Expression


Co-expression Network