LOC110501637 (LOC106582050)


Basic Information

Item Value
gene id LOC110501637
gene name LOC106582050
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 25923432 ~ 25926978 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579336.2
CAAATATGAGCAGTGTTTCTTTTTGTACCTGTCAGTCTGTCCTAGGCTGAGGTTGGCTGGTTAGTTGGTCGATTCTGGTATTTGTCTCTTTCTCGTCCTACTTCCCCCCTCCAGGACCCTGCCTCTTTCTCAACGCCTGTGATTGTAACATCTTCTCAACCTCCCTGGAACGATACAGGAAACCCTGAACAGGTGATCATGCTGCCTAATTGGTCAAACATGACCCTCCACCTGGAGGACTCTCTGACCCGTGCCCTGGGCCATTATCTTGACAACTGGAGCCGGAACTCCTCGAAGGCAGAACAGGCTCTGGACAACACTCTGGCAGAGGAGAACTTCAGGAACGTCATATGGTATCTGATAGTGATGATCGGAATGTTTGCCTTCATCGTCGTGGCGATCCTGGTGAGCACGGTGAAGTCGAAGCGACGTGAGCATTCTAACGACCCCTACCATAAATACATTGAGGAAGACTGGACCGCCCAGCTCCAACAGCAGAGCTTTGTCATCAACAACCCCACGGCCAACTAACCCAATGTATATTCACATGCCATATACAAacaccagtggtggaaaagtacagaattgtcatacttgagtaaaagtaaggaTATCTTAATTAATAGagaatgactcaagtaaaagtgaaagtcacccagtaaaattctacttgagtaaaagtctaaaagttttggttttaaatatacttaagtatcaaaactaaatgtaatttctaaaatatacttaagtatcaaaagtaaaagtataaataaattCAAATTTCTTATACTAACAAACAAGACTgcaccatttttattttatttatttacagatagccaggggcacactccaacactcagatataattgATAAATGAAGcacgtgtgtttagtgagtctgccagatcagaggttaagtgtgtgaatttgacaatttttctgttctgctaagcattcaaaaggaaaatgtatggagtaaaaagtacattattttctttaggaatgtagtgaactaaaagtagtcaaaaatataaatagtaaagtacagatacccaaaaaatcTACTTAAGTTGTACTTTATAGTATATTTACTTAAGCACTTTGaccactgacaaacacacaggcacacacacatgcacatagagAGGAATATGAATACTGTCTTTTTGTATTGGACAAAGCCTATGGGAAAATACATTTAGTTTTTGTAGGGTTTTTAGATAAATGCCAAAAATAAGGTTTAGGAGATTTTATATGTTTTGTTCTCTGAGATAATCTTCATTAGCTAAcattttttgtgaattttgaagcatttagGTAAAACAATatgatctcatagaacaaaacatataaaaTCTCCTAAAtctgttaacctcagaccttttATTTCGGCATTTATACCAAAACTCAATTATTTCCCCTTAATTTCCCCCATAGGAATGTCTGAACGAACCAGAGGAACTAATTTCCGGGTTTTAGGACTAAAAACTGGTGAGCTCTATGGTCCGAAAGTTAAATAATCTTGTGGTACCCATTAGTAACAAATGTGTTGTAGTCAATGTATAACTAATATGTTAATCATGGATTGTATTAAAAAAGTGGATCTATCAATA

Function

NR:

description
potassium voltage-gated channel subfamily E member 2-like

GO: NA

KEGG:

id description
K04896 KCNE2; potassium voltage-gated channel Isk-related subfamily E member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579336.2 True 1612 mRNA 0.37 2 25923432 25926978

Neighbor

gene id symbol gene type direction distance location
LOC110501634 LOC106582107 coding upstream 9326 25907843 ~ 25914106 (+)
LOC110501629 ppa6 coding upstream 214539 25702896 ~ 25708893 (+)
LOC110501626 LOC106582114 coding upstream 227701 25676037 ~ 25695731 (+)
LOC110501624 LOC106582115 coding upstream 272169 25619178 ~ 25651263 (+)
LOC110502118 LOC106582051 coding upstream 335745 25564668 ~ 25587687 (+)
LOC100301670 LOC100301670 coding downstream 7000 25933978 ~ 25940120 (+)
LOC110502075 NA coding downstream 104509 26031487 ~ 26035739 (+)
LOC110501640 LOC106582103 coding downstream 127052 26054030 ~ 26062493 (+)
LOC110501641 LOC106582040 coding downstream 180172 26107150 ~ 26110516 (+)
klhl6 klhl6 coding downstream 374161 26301139 ~ 26307181 (+)
G1793136 NA non-coding upstream 13601 25872689 ~ 25909831 (+)
G1793142 LOC100194724 non-coding upstream 19378 25897760 ~ 25904054 (+)
G1793121 LOC106582109 non-coding upstream 77469 25843303 ~ 25845963 (+)
G1793065 NA non-coding upstream 114168 25808430 ~ 25809264 (+)
G1793063 NA non-coding upstream 116780 25806477 ~ 25806652 (+)
G1793174 NA non-coding downstream 13265 25940243 ~ 25953741 (+)
G1793183 NA non-coding downstream 27033 25954011 ~ 25954252 (+)
G1793201 NA non-coding downstream 54611 25981589 ~ 26000950 (+)
G1793214 NA non-coding downstream 71120 25998098 ~ 25998595 (+)
G1793265 NA non-coding downstream 143347 26070325 ~ 26070573 (+)
G1793045 NA other upstream 191678 25731326 ~ 25731754 (+)
G1792649 NA other upstream 626875 25294546 ~ 25296557 (+)
LOC110501609 fam155a other upstream 909777 24848514 ~ 25013655 (+)
G1792040 NA other upstream 1080147 24842942 ~ 24843285 (+)
LOC110501605 LOC106582130 other upstream 1512719 24394068 ~ 24423067 (+)
G1793717 NA other downstream 388848 26315826 ~ 26316243 (+)
G1795411 NA other downstream 1976604 27898367 ~ 27912875 (+)
LOC110501693 LOC106582057 other downstream 2109950 28036917 ~ 28052019 (+)
G1795550 NA other downstream 2164587 28091565 ~ 28092116 (+)
LOC110502085 LOC106582160 other downstream 3050912 28977890 ~ 28984226 (+)

Expression


Co-expression Network