il17d (il-17d)


Basic Information

Item Value
gene id il17d
gene name il-17d
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 27647730 ~ 27648708 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124399.1
AAATTCTCTCTTTGCAGTAAAAGTTTACAATTTCGTGTCCAACAGAAGTGCGCAACGATGTTTGGTCGAGTATCTTTCGTGTGTTTGCTTCTGGTGCTGTTATGCGATGTGGCATCGGTAGCCAAGGTGTCCAAGAAGTCCACCCGGGGCCGAAAGTGTTTGGACTTACCGGAAGAAATCCTCGAGCAGATGTTTGGGCGGCTTTCGGTGGGCGTCCTGAGTGCGTTCCACCACACTCTGCAGCTTGCACCATTGGAGCGGAAGAATCTCACCTGCCCATCAGGCGGACGCCCTGTCCCCGACAGGAAGTCTCGGATTCCCGTCAACCTTCTCAGCCTGTCTCCCTGGGCATACAGGATCTCCCACGACCCCGCCAGGTATCCCAGGTTCATACCCGAGGCATATTGCTTGTGTAAAGGCTGTCTGATAGGACCGTTTGGTCAGGAGAGCGACCAGTACCGCAGCACCCCCGTGTACATGCCCTCCGTCATCCTGCGACGCACAGGTTCCTGCGTTGGGGGGCGCCACTCATACACAGAGAGCTACGTATCTGTGGCCGTGGGGTGCACCTGTGTTCCCCTGCTGGAGAAGGATAGGGATGCGCAGAGCAGCAACCAGAGcctggagagagaacagacaaaaGCTGACGAGCTCAGCTCCAACGACAAGAACATATAAAACATCCATGGAAAGCTGTATGAAAATGTATGGTTGGCTGTACAACACAACACCGTGTACCTAGCAGCAGCAGCTTTTGAACAGTAGTATAACTCTCGACACACACTGCCACCTGCTGGTGAATGGAATTATATTTCATGATCATCTAAGCATGTTTCCAGGCTCTCataagtttgtattttctgtgtgtgtatattaaaTATTATTTACACTG

Function

NR:

description
interleukin 17 isoform D precursor

GO:

id name namespace
GO:0006954 inflammatory response biological_process
GO:0005576 extracellular region cellular_component
GO:0005125 cytokine activity molecular_function

KEGG:

id description
K05492 IL17D, IL27; interleukin 17D

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124399.1 True 892 mRNA 0.51 2 27647730 27648708

Neighbor

gene id symbol gene type direction distance location
LOC110501675 LOC106582077 coding downstream 103148 27539464 ~ 27544582 (-)
LOC110501672 NA coding downstream 130101 27501691 ~ 27517629 (-)
LOC110501670 LOC106582076 coding downstream 149105 27492474 ~ 27498625 (-)
LOC110502080 wars2 coding downstream 210251 27371067 ~ 27437479 (-)
LOC110501665 NA coding downstream 283137 27340833 ~ 27364593 (-)
LOC110502081 ift88 coding upstream 526 27649234 ~ 27662614 (-)
LOC110502082 LOC106582065 coding upstream 58223 27706931 ~ 27740630 (-)
LOC110501685 LOC106582064 coding upstream 92667 27741372 ~ 27770708 (-)
LOC110501686 LOC106582063 coding upstream 127863 27776571 ~ 27817123 (-)
acbp acbp coding upstream 185799 27834422 ~ 27838573 (-)
G1795689 NA non-coding downstream 2703 27644823 ~ 27645027 (-)
G1795660 NA non-coding downstream 37330 27610003 ~ 27610400 (-)
G1795632 LOC106582069 non-coding downstream 70777 27573559 ~ 27576953 (-)
G1795603 NA non-coding downstream 127832 27519665 ~ 27519898 (-)
G1795703 NA non-coding upstream 26428 27675136 ~ 27675378 (-)
G1795707 NA non-coding upstream 33467 27682175 ~ 27682438 (-)
G1795708 LOC106582078 non-coding upstream 34372 27683080 ~ 27688572 (-)
G1795771 NA non-coding upstream 215935 27864643 ~ 27865088 (-)
G1794978 NA other downstream 361635 27268662 ~ 27286095 (-)
LOC110501627 LOC106582113 other downstream 1936111 25709599 ~ 25744218 (-)
G1792433 NA other downstream 2661462 24985959 ~ 24986268 (-)
G1792345 NA other downstream 2789845 24856824 ~ 24857885 (-)
G1792342 LOC106582127 other downstream 2797978 24848591 ~ 24849752 (-)
G1795850 NA other upstream 331956 27980664 ~ 27981379 (-)
LOC110501691 LOC106582059 other upstream 360947 28009421 ~ 28019116 (-)
G1796204 NA other upstream 685516 28334224 ~ 28334621 (-)
G1796239 NA other upstream 786207 28434915 ~ 28451815 (-)

Expression


Co-expression Network