Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110501686 |
| gene name | LOC106582063 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 27776571 ~ 27817123 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110501686 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021579422.2 | False | 4341 | mRNA | 0.48 | 14 | 27776571 | 27817123 |
| XR_002470238.2 | False | 4842 | mRNA | 0.48 | 12 | 27778697 | 27817123 |
| XM_021579421.2 | False | 5565 | mRNA | 0.42 | 4 | 27786196 | 27793639 |
| XM_021579420.2 | False | 5847 | mRNA | 0.41 | 3 | 27786196 | 27793640 |
| XM_021579418.2 | False | 7197 | mRNA | 0.45 | 9 | 27786196 | 27817123 |
| XM_021579419.2 | True | 7152 | mRNA | 0.45 | 9 | 27786196 | 27817123 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501685 | LOC106582064 | coding | downstream | 5863 | 27741372 ~ 27770708 (-) |
| LOC110502082 | LOC106582065 | coding | downstream | 35941 | 27706931 ~ 27740630 (-) |
| LOC110502081 | ift88 | coding | downstream | 113957 | 27649234 ~ 27662614 (-) |
| il17d | il-17d | coding | downstream | 127863 | 27647730 ~ 27648708 (-) |
| LOC110501675 | LOC106582077 | coding | downstream | 231989 | 27539464 ~ 27544582 (-) |
| acbp | acbp | coding | upstream | 17384 | 27834422 ~ 27838573 (-) |
| LOC110501689 | LOC106582060 | coding | upstream | 86459 | 27903582 ~ 27912919 (-) |
| LOC110501691 | LOC106582059 | coding | upstream | 192298 | 28009421 ~ 28019116 (-) |
| LOC110502083 | LOC101162407 | coding | upstream | 241770 | 28058893 ~ 28062683 (-) |
| LOC110501696 | LOC106582163 | coding | upstream | 721582 | 28538705 ~ 28548565 (-) |
| G1795708 | LOC106582078 | non-coding | downstream | 87999 | 27683080 ~ 27688572 (-) |
| G1795707 | NA | non-coding | downstream | 94133 | 27682175 ~ 27682438 (-) |
| G1795703 | NA | non-coding | downstream | 101193 | 27675136 ~ 27675378 (-) |
| G1795689 | NA | non-coding | downstream | 131544 | 27644823 ~ 27645027 (-) |
| G1795660 | NA | non-coding | downstream | 166171 | 27610003 ~ 27610400 (-) |
| G1795771 | NA | non-coding | upstream | 47520 | 27864643 ~ 27865088 (-) |
| G1795777 | LOC106582058 | non-coding | upstream | 113916 | 27931039 ~ 27935284 (-) |
| G1795871 | NA | non-coding | upstream | 206615 | 28023738 ~ 28023937 (-) |
| G1795885 | LOC106582057 | non-coding | upstream | 227128 | 28044251 ~ 28044507 (-) |
| G1794978 | NA | other | downstream | 490476 | 27268662 ~ 27286095 (-) |
| LOC110501627 | LOC106582113 | other | downstream | 2064952 | 25709599 ~ 25744218 (-) |
| G1792433 | NA | other | downstream | 2790303 | 24985959 ~ 24986268 (-) |
| G1792345 | NA | other | downstream | 2918686 | 24856824 ~ 24857885 (-) |
| G1795850 | NA | other | upstream | 163541 | 27980664 ~ 27981379 (-) |
| G1796204 | NA | other | upstream | 517101 | 28334224 ~ 28334621 (-) |
| G1796239 | NA | other | upstream | 617792 | 28434915 ~ 28451815 (-) |
| G1796401 | NA | other | upstream | 809015 | 28626138 ~ 28626891 (-) |
