LOC110501691 (LOC106582059)


Basic Information

Item Value
gene id LOC110501691
gene name LOC106582059
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28009421 ~ 28019116 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036959037.1
AGTCAGCCAGCTATGCTTATCAACAAAATGTGATTATCGTCAGTCAACTTTATACAAATTACTAAGTAACAAAATCGATGATGTAATCTTACACGATATAGTAAGCTAGTAGTTGTTTGTATCCAACATTGTGTTTTGGAAAGTATAATgccagctagctacagtagttggcTGGCTATCTTCTAGCGTTACAGTAGCTAGATAGCTTAGGTCATCACAACGAGTTAACTAGGTAGCTTACTAACGTTACGTTGCACTGCAAATACAGACGCACGTTACGGTTATGTCAGCTCTCAGTTCGTAGATGAAACGtttatgcatgcatgcatgtaggTATTAAAGTAGCGAGCCATATGGCAACCATGTTCAATCATTTTCGGAGGCTAagcatacactacatggccaaaagtatgtggacacctgctcgtcgaacgtcTCAATACACAATCATGAACgttgatatggagttggtccccctttgctactatatcagcctccactcttctgggaaggctttccactagatgttggaacattgctgctgggacttgctttcattcagccacgagtattagtgaggtcgggcactgatatgttgagcaattaggcctggctcgcagtcgtcgTTCCATTTCATGGGGTTGATGTcaacccagattcatctgtcggactgccagatggtgaagcatgattaatcactccagagaacgcgtttccactgctccagagcccaatggcagcaagctttacaccactccagctgatgtttgtgtgcggctgctcaaccATGGAAATTTCATGAGGCTCCAgtccagacgaacagttcttctgctggaactcagtaGGTGTTGGTGATGTCAGTGGACCATACGATCACTTGAGGATAAAGTTAGCGTTTCCCTTTTCTCATCCTGTCCTGGCGTCCACGGCTGCTCCGGCCCTGGCAGCCATGGCCGACTCTACAGTGGTCAGCGACCAGCAGCCGCCCGTGTCCGGTCAGACTACTCCTTCCAGAGGACCGTACATCGCGGTGATCACAAACAGAAACACCAATCTGGGGATCCGTGGGTTCATGCTGTTCTCTATAGGAGTGTTCTTGGCTTTGGTGCTCAATCTGCTGCAGGTACAGAGGAACGTCACTCTGTTCCCCCCTGATGTCATCAGTAGCATATTCTCATCAGCCTGGTGGGTGCCGCCCTGCTGTGGAACCGCCTCGGCAATGATCGGTCTGTTGTATCCATGCATTGACAGTAGGCTCGGCGAGCCCCACAAGTTCAAGCGGGAGTGGTCCAGTGTGATGCGTTGTGTGGCCGTGTTCGTTGGCATCAACCATGCCAGCGCTAAAGTGGACTTTGCGAACAACGTGCAGCTGTCCCTGACGCTGGCGGCCCTGTCCATCGGCCTCTGGTGGACATTTGACCGGTCTCGCTCCGGCTTTGGCCTGGGGGTGGTCATCGCCCTGCTGGCCACTCTGTCCACTCAGCTCCTGGTCTACAACGGAGTCTTTCAGTATACCTCTCCAGATTTCCTGTACATTCGCTCCTGGTTGCCTTGCATCTTCTTCGCTGGTGTGATAACCATGGGGAACATAGGACGGCAGCTAGCCCTGTATGAATGCAAACGTATGTCAGGAAAGACTCATCAAGACTAAAAGAACTTCTGGCTATATCAAACTGTTGcacaaaatatttttaaaaattgcAACAAAAAGCCGAAAGGAGGATGTAAAAGGACATCTGTATGCAGCGTTGATGGGGATTGGTCAATCATGGTGGAGGCGGAGCAGTCATGCACAATTATGTGCTTCTGTTTTGCTGAGTGCTGTAGGACAAGACTGTTTCGATTGGTTGATTCCTTTGTGCCTCTTTAGGGCCGAGGTGGACGGACAACAGATAGCTTTATTATAAGCATTCAATGGCTGGCCTAATAAGAGGAATAACAAGAATTGccgatgttgtgtgtgtgtggtaggtaggCTCAATCTGCAACGCAATCTGTGATTGCAACTCAACAGGCACCAATATTAGTGTCACTCTGCTGCTGTTCAGGGCACCTCAGCACCAGTGGTGTGAAACCTTTGGCTCCATCGTGCCAAACAGACTTACACACAGGATTATCTGAATTATTTTCTTTATTCATCCATTCCTTATATCATTGATACATTAGTAGAATCTATATACATTTATTTCATGCTTTTAAAATGTAcaattatatacatacatatagtttttttttttttttgttacatgtGGATAATGTCTTTGCTGGCAGTTGAGAAGGGGTGAAGTGTTTATTGCTGCACTTATTTGTGACATCCTAGCGGGATATCAAGGCAACTGGCATACAGGGTCCAGTTGGTATTTCAAACAACCTTACCTACACCTGCTTTTCTACACCTGCCCATTTTGGGTCCATTCAATGTTCAATTGAAATTAAAATGACtgttttgtaaaaaataataataataaaatgctCATAGAAATTTATGGGCAAAatttcacttcctgaattgaaaaccGAATTGACCTAAACCCCGATCAGTTCAAGTCAGAGACCAGGCTAACTATTTCATTGTCCATCCAGCAGGTGCACACAAGAATCCACATCAGCAGTGGTTCTTGGGTCAGAGGTACTGCTGATAAGCTATTAGTGCTTATTGAGTTCGGTTTGATTATAAAAATATAAACCATCCAAGTTTTCGGTTTTGATTATTTTTCAACGTTAAATGCGTTGTGGGCTGAATGCTGTAAAACAGAATAAAACAGTAAAGGTCCCTTGGTGACTGTCCATTACTGCATATCACGTATTAACATCTCTTCACATTACTTTACAAAAATATTTCacttgtgtatattacatttgttttatttgatgacttttaTTTAATTCCAAGCATCATCTCATCTGTATAGAGCTgatgtctgacaaaatcactattttagtagttcattaaagtaaataaggcatacttttatgactgttgaataccaactatcagtcacttagatcatgtattttaaGGTAAAGATACCTCCCGAATCAACTGCTATCTATCCCTCTCAATCGCCATTCTCCCTCCGTGTCTGCCCCACACTAGCATAGCGGGGGTAAAATAAACACACAAACCTGACAAGTAGGTGTGGAATGGGTCATTGTTGTTAATTACCAAGTTTCTGCATTAATCTATGTAGAATATTTGCCTGTTGGAAACTATAACTCcttactacatcgcacagtttgGGCTTGATCTGATGTATCTCTAGAAAAACTGCACGTTGAGCACACAGACAATAATTGAACTGACTTCtgcattaaaaaaaatggaaCATTTGATTCGCTAAACGGATATAATAAAGTGTTACATTCCTGTA
>XM_021579427.2
ATGACGCACGGGCAACGCACACAGTTGCTGTTAACATGATTTCAACTAAGTTTCTTATCTCCTTGAAAGTATCTCTGGTTTTAGGAGCTGATTGGTTTGGCACCTAGCCAGTGCCAAGCCGGTTCATCGGAAGTTAGCGAGAAGGTTAATTTCGAAGCTAGGTCTCAAACTCCTGCTAACTACATAAAAACATAACGTGGAATGTGTACTTTACAATTTTAGAAAATATACCTTTGAAACGTTGAAGGGTGTTGGTGATGTCAGTGGACCATACGATCACTTGAGGATAAAGTTAGCGTTTCCCTTTTCTCATCCTGTCCTGGCGTCCACGGCTGCTCCGGCCCTGGCAGCCATGGCCGACTCTACAGTGGTCAGCGACCAGCAGCCGCCCGTGTCCGGTCAGACTACTCCTTCCAGAGGACCGTACATCGCGGTGATCACAAACAGAAACACCAATCTGGGGATCCGTGGGTTCATGCTGTTCTCTATAGGAGTGTTCTTGGCTTTGGTGCTCAATCTGCTGCAGGTACAGAGGAACGTCACTCTGTTCCCCCCTGATGTCATCAGTAGCATATTCTCATCAGCCTGGTGGGTGCCGCCCTGCTGTGGAACCGCCTCGGCAATGATCGGTCTGTTGTATCCATGCATTGACAGTAGGCTCGGCGAGCCCCACAAGTTCAAGCGGGAGTGGTCCAGTGTGATGCGTTGTGTGGCCGTGTTCGTTGGCATCAACCATGCCAGCGCTAAAGTGGACTTTGCGAACAACGTGCAGCTGTCCCTGACGCTGGCGGCCCTGTCCATCGGCCTCTGGTGGACATTTGACCGGTCTCGCTCCGGCTTTGGCCTGGGGGTGGTCATCGCCCTGCTGGCCACTCTGTCCACTCAGCTCCTGGTCTACAACGGAGTCTTTCAGTATACCTCTCCAGATTTCCTGTACATTCGCTCCTGGTTGCCTTGCATCTTCTTCGCTGGTGTGATAACCATGGGGAACATAGGACGGCAGCTAGCCCTGTATGAATGCAAACGTATGTCAGGAAAGACTCATCAAGACTAAAAGAACTTCTGGCTATATCAAACTGTTGcacaaaatatttttaaaaattgcAACAAAAAGCCGAAAGGAGGATGTAAAAGGACATCTGTATGCAGCGTTGATGGGGATTGGTCAATCATGGTGGAGGCGGAGCAGTCATGCACAATTATGTGCTTCTGTTTTGCTGAGTGCTGTAGGACAAGACTGTTTCGATTGGTTGATTCCTTTGTGCCTCTTTAGGGCCGAGGTGGACGGACAACAGATAGCTTTATTATAAGCATTCAATGGCTGGCCTAATAAGAGGAATAACAAGAATTGccgatgttgtgtgtgtgtggtaggtaggCTCAATCTGCAACGCAATCTGTGATTGCAACTCAACAGGCACCAATATTAGTGTCACTCTGCTGCTGTTCAGGGCACCTCAGCACCAGTGGTGTGAAACCTTTGGCTCCATCGTGCCAAACAGACTTACACACAGGATTATCTGAATTATTTTCTTTATTCATCCATTCCTTATATCATTGATACATTAGTAGAATCTATATACATTTATTTCATGCTTTTAAAATGTAcaattatatacatacatatagtttttttttttttttgttacatgtGGATAATGTCTTTGCTGGCAGTTGAGAAGGGGTGAAGTGTTTATTGCTGCACTTATTTGTGACATCCTAGCGGGATATCAAGGCAACTGGCATACAGGGTCCAGTTGGTATTTCAAACAACCTTACCTACACCTGCTTTTCTACACCTGCCCATTTTGGGTCCATTCAATGTTCAATTGAAATTAAAATGACtgttttgtaaaaaataataataataaaatgctCATAGAAATTTATGGGCAAAatttcacttcctgaattgaaaaccGAATTGACCTAAACCCCGATCAGTTCAAGTCAGAGACCAGGCTAACTATTTCATTGTCCATCCAGCAGGTGCACACAAGAATCCACATCAGCAGTGGTTCTTGGGTCAGAGGTACTGCTGATAAGCTATTAGTGCTTATTGAGTTCGGTTTGATTATAAAAATATAAACCATCCAAGTTTTCGGTTTTGATTATTTTTCAACGTTAAATGCGTTGTGGGCTGAATGCTGTAAAACAGAATAAAACAGTAAAGGTCCCTTGGTGACTGTCCATTACTGCATATCACGTATTAACATCTCTTCACATTACTTTACAAAAATATTTCacttgtgtatattacatttgttttatttgatgacttttaTTTAATTCCAAGCATCATCTCATCTGTATAGAGCTgatgtctgacaaaatcactattttagtagttcattaaagtaaataaggcatacttttatgactgttgaataccaactatcagtcacttagatcatgtattttaaGGTAAAGATACCTCCCGAATCAACTGCTATCTATCCCTCTCAATCGCCATTCTCCCTCCGTGTCTGCCCCACACTAGCATAGCGGGGGTAAAATAAACACACAAACCTGACAAGTAGGTGTGGAATGGGTCATTGTTGTTAATTACCAAGTTTCTGCATTAATCTATGTAGAATATTTGCCTGTTGGAAACTATAACTCcttactacatcgcacagtttgGGCTTGATCTGATGTATCTCTAGAAAAACTGCACGTTGAGCACACAGACAATAATTGAACTGACTTCtgcattaaaaaaaatggaaCATTTGATTCGCTAAACGGATATAATAAAGTGTTACATTCCTGTA
>TU2055220
AAAGTGCATAAAACAAAGGATGTGTAAAACAATAAGATTACCAAAAAGGTGTGTTTTTAAATGTGATATTCTGTTTACAAGAAAGCACCTTACTCTGAGTAGAAACCATAGTTCCTGTGTGGACTATCCTACTACAAGCTCAGCTGTCCTTAACCCCTCTCAGAAAGTGGACTTTGCGAACAACGTGCAGCTGTCCCTGACGCTGGCGGCCCTGTCCATCGGCCTCTGGTGGACATTTGACCGGTCTCGCTCCGGCTTTGGCCTGGGGGTGGTCATCGCCCTGCTGGCCACTCTGTCCACTCAGCTCCTGGTCTACAACGGAGTCTTTCAGTATACCTCTCCAGATTTCCTGTACATTCGCTCCTGGTTGCCTTGCATCTTCTTCGCTGGTGTGATAACCATGGGGAACATAGGACGGCAGCTAGCCCTGTATGAATGCAAACGTATGTCAGGAAAGACTCATCAAGACTAAAAGAACTTCTGGCTATATCAAACTGTTGcacaaaatatttttaaaaattgcAACAAAAAGCCGAAAGGAGGATGTAAAAGGACATCTGTATGCAGCGTTGATGGGGATTGGTCAATCATGGTGGAGGCGGAGCAGTCATGCACAATTATGTGCTTCTGTTTTGCTGAGTGCTGTAGGACAAGACTGTTTCGATTGGTTGATTCCTTTGTGCCTCTTTAGGGCCGAGGTGGACGGACAACAGATAGCTTTATTATAAGCATTCAATGGCTGGCCTAATAAGAGGAATAACAAGAATTGccgatgttgtgtgtgtgtggtaggtaggCTCAATCTGCAACGCAATCTGTGATTGCAACTCAACAGGCACCAATATTAGTGTCACTCTGCTGCTGTTCAGGGCACCTCAGCACCAGTGGTGTGAAACCTTTGGCTCCATCGTGCCAAACAGACTTACACACAGGATTATCTGAATTATTTTCTTTATTCATCCATTCCTTATATCATTGATACATTAGTAGAATCTATATACATTTATTTCATGCTTTTAAAATGTAcaattatatacatacatatagtttttttttttttttgttacatgtGGATAATGTCTTTGCTGGCAGTTGAGAAGGGGTGAAGTGTTTATTGCTGCACTTATTTGTGACATCCTAGCGGGATATCAAGGCAACTGGCATACAGGGTCCAGTTGGTATTTCAAACAACCTTACCTACACCTGCTTTTCTACACCTGCCCATTTTGGGTCCATTCAATGTTCAATTGAAATTAAAATGACtgttttgtaaaaaataataataataaaatgctCATAGAAATTTATGGGCAAAatttcacttcctgaattgaaaaccGAATTGACCTAAACCCCGATCAGTTCAAGTCAGAGACCAGGCTAACTATTTCATTGTCCATCCAGCAGGTGCACACAAGAATCCACATCAGCAGTGGTTCTTGGGTCAGAGGTACTGCTGATAAGCTATTAGTGCTTATTGAGTTCGGTTTGATTATAAAAATATAAACCATCCAAGTTTTCGGTTTTGATTATTTTTCAACGTTAAATGCGTTGTGGGCTGAATGCTGTAAAACAGAATAAAACAGTAAAGGTCCCTTGGTGACTGTCCATTACTGCATATCACGTATTAACATCTCTTCACATTACTTTACAAAAATATTTCacttgtgtatattacatttgttttatttgatgacttttaTTTAATTCCAAGCATCATCTCATCTGTATAGAGCTgatgtctgacaaaatcactattttagtagttcattaaagtaaataaggcatacttttatgactgttgaataccaactatcagtcacttagatcatgtattttaaGGTAAAGATACCTCCCGAATCAACTGCTATCTATCCCTCTCAATCGCCATTCTCCCTCCGTGTCTGCCCCACACTAGCATAGCGGGGGTAAAATAAACACACAAACCTGACAAGTAG

Function

NR:

description
insulin-induced gene 2 protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036959037.1 False 3371 mRNA 0.43 7 28009421 28018783
XM_021579427.2 False 2774 mRNA 0.43 7 28009421 28019116
TU2055220 True 1958 TUCP 0.40 3 28009655 28012690

Neighbor

gene id symbol gene type direction distance location
LOC110501689 LOC106582060 coding downstream 96502 27903582 ~ 27912919 (-)
acbp acbp coding downstream 170848 27834422 ~ 27838573 (-)
LOC110501686 LOC106582063 coding downstream 192298 27776571 ~ 27817123 (-)
LOC110501685 LOC106582064 coding downstream 238713 27741372 ~ 27770708 (-)
LOC110502082 LOC106582065 coding downstream 268791 27706931 ~ 27740630 (-)
LOC110502083 LOC101162407 coding upstream 39777 28058893 ~ 28062683 (-)
LOC110501696 LOC106582163 coding upstream 519589 28538705 ~ 28548565 (-)
trnan-guu-200 NA coding upstream 700943 28720059 ~ 28720298 (-)
LOC110501699 NA coding upstream 800214 28819330 ~ 28826708 (-)
LOC118943585 NA coding upstream 1305029 29324145 ~ 29325269 (-)
G1795777 LOC106582058 non-coding downstream 74137 27931039 ~ 27935284 (-)
G1795771 NA non-coding downstream 144333 27864643 ~ 27865088 (-)
G1795708 LOC106582078 non-coding downstream 320849 27683080 ~ 27688572 (-)
G1795707 NA non-coding downstream 326983 27682175 ~ 27682438 (-)
G1795871 NA non-coding upstream 4622 28023738 ~ 28023937 (-)
G1795885 LOC106582057 non-coding upstream 25135 28044251 ~ 28044507 (-)
G1795896 LOC106582055 non-coding upstream 53759 28072875 ~ 28075589 (-)
G1795914 NA non-coding upstream 76313 28095429 ~ 28095647 (-)
G1795920 NA non-coding upstream 86611 28105727 ~ 28105945 (-)
G1795850 NA other downstream 28042 27980664 ~ 27981379 (-)
G1794978 NA other downstream 723326 27268662 ~ 27286095 (-)
LOC110501627 LOC106582113 other downstream 2297802 25709599 ~ 25744218 (-)
G1792433 NA other downstream 3023153 24985959 ~ 24986268 (-)
G1796204 NA other upstream 315108 28334224 ~ 28334621 (-)
G1796239 NA other upstream 415799 28434915 ~ 28451815 (-)
G1796401 NA other upstream 607022 28626138 ~ 28626891 (-)
G1797146 LOC106582182 other upstream 1192548 29211664 ~ 29243649 (-)

Expression


Co-expression Network