LOC110502083 (LOC101162407)


Basic Information

Item Value
gene id LOC110502083
gene name LOC101162407
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28058893 ~ 28062683 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110502083
ATGCAGACCGTGGACCAGTGTTACCTGATAGCCCCAGACCAGCCAGCACCTGGCCTCTCTGCCCGGCTCCAATATGTGTATGTGAGTTATAGGCTCCCGTTATCGGTGTCTGAGTTTAAGTGTGAGAGGGATGCGTTAGCGGACATGATAGAAGAGCTCAAGCGGAGCGATGTGTTTGGATGTCagtggaggggactgagcattTGCAGAAACAGCTTCACAGGAGCAcagctggttggctggctgcagGAAGTTAGGGGCATGGAGAGAACTAAGGTGTGTGAGACTGGGCAGGTGTTACTGGACAAGCATGGCCAAGGCAGGGGTTTGGAATGAGTGACAGGCTGTACAGGCTGATGGAACATGACCCTCACTCAGCCCTGAATGCAGGACAGACTGTTGCATGCTCCCctctctcaactgcTGAGTTGTCTGCCATTCTGAGGGATAAGTTCCTGAAGTTTTCAAAGTGTCTCTCTGCTGACGGAAAGTTAAGAGGCACACTGAACAAACTGAACCCTCCAGTACAACACATTTATTATGAGATGACAGTGTTTGAGTGCTACTGTCATCTGGCTGTTCAGCTACAGAGAGTAGAGCTGCTATCTCTGACCAGAGAGGAGAAACTAGCCTTCTTCATCAACACCTACAATGCTCTGGTCATCCTCCGGGCTGGGAGCCCCAACCAACACGTGGCAGAGATCCAGGTTCTTTATCTACGTGAGCTGCCTGATCGGGGGGAGAGGTGTTCACGCTGCAGGACATAGAGAACGGAGTTTTGAGGGGGAACAGAAATGGCGTCGCACGGCTTCTCGGGCCCTTCTCTAAGACTGACCCTCGCTTACAGGTGGCTCTCCCAGACACTGAGCCTATAATCCATCTGGCTCTGGATTGTGAAGCTAAAGACTGTCCACCCATCAAAACATAGACTCCACAGgacatcGATAGTCAGCTGCGCATGGCGGCCGAAGCCTTCCTGGATCGATGACGTCTATGTGTTAGATTCTGGGAAGTGAGAGGTTAGTCTCAGACAGTCTCAAGTGGTGCAAGGCAGACTTCGGAGACACGGATGAGAAGCTGTTGAAATGGATCCTGGAGCACATGGGGAGTCTTCCAAGTGGTCCAGCCTTCAGAGTGTCCTCTCCTGGGAAGATCACTTACTTAAAGTCACTTACTGTACCTGTCCTAAAACTGGAGCACCAACAGCTTTCACTAAGGCATAGCAACAAGccatag

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0009055 electron transfer activity molecular_function
GO:0015035 protein disulfide oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110502083 True 1236 mRNA 0.52 9 28058893 28062683

Neighbor

gene id symbol gene type direction distance location
LOC110501691 LOC106582059 coding downstream 39777 28009421 ~ 28019116 (-)
LOC110501689 LOC106582060 coding downstream 145974 27903582 ~ 27912919 (-)
acbp acbp coding downstream 220320 27834422 ~ 27838573 (-)
LOC110501686 LOC106582063 coding downstream 241770 27776571 ~ 27817123 (-)
LOC110501685 LOC106582064 coding downstream 288185 27741372 ~ 27770708 (-)
LOC110501696 LOC106582163 coding upstream 476022 28538705 ~ 28548565 (-)
trnan-guu-200 NA coding upstream 657376 28720059 ~ 28720298 (-)
LOC110501699 NA coding upstream 756647 28819330 ~ 28826708 (-)
LOC118943585 NA coding upstream 1261462 29324145 ~ 29325269 (-)
LOC110501708 LOC106582177 coding upstream 1370869 29433552 ~ 29441071 (-)
G1795885 LOC106582057 non-coding downstream 14386 28044251 ~ 28044507 (-)
G1795871 NA non-coding downstream 34956 28023738 ~ 28023937 (-)
G1795777 LOC106582058 non-coding downstream 123609 27931039 ~ 27935284 (-)
G1795771 NA non-coding downstream 193805 27864643 ~ 27865088 (-)
G1795896 LOC106582055 non-coding upstream 10192 28072875 ~ 28075589 (-)
G1795914 NA non-coding upstream 32746 28095429 ~ 28095647 (-)
G1795920 NA non-coding upstream 43044 28105727 ~ 28105945 (-)
G1795923 NA non-coding upstream 46821 28109504 ~ 28109880 (-)
G1795929 NA non-coding upstream 57845 28120528 ~ 28121557 (-)
G1795850 NA other downstream 77514 27980664 ~ 27981379 (-)
G1794978 NA other downstream 772798 27268662 ~ 27286095 (-)
LOC110501627 LOC106582113 other downstream 2347274 25709599 ~ 25744218 (-)
G1796204 NA other upstream 271541 28334224 ~ 28334621 (-)
G1796239 NA other upstream 372232 28434915 ~ 28451815 (-)
G1796401 NA other upstream 563455 28626138 ~ 28626891 (-)
G1797146 LOC106582182 other upstream 1148981 29211664 ~ 29243649 (-)

Expression


Co-expression Network