Gene
RNA
| Item | Value |
|---|---|
| gene id | trnaa-ugc-174 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 28290225 ~ 28290297 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Deoxyribonuclease gamma precursor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnaa-ugc-174 | True | 73 | mRNA | 0.64 | 1 | 28290225 | 28290297 |
28,289,200
28,289,400
28,289,600
28,289,800
28,290,000
28,290,200
28,290,400
28,290,600
28,290,800
28,291,000
28,291,200
28,291,200
28,291,400
28,291,600
28,291,800
28,292,000
28,292,200
28,292,400
28,292,600
28,292,800
28,293,000
28,293,200
NC_048586.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501694 | LOC106582055 | coding | upstream | 213654 | 28072420 ~ 28076571 (+) |
| LOC110501693 | LOC106582057 | coding | upstream | 238206 | 28036917 ~ 28052019 (+) |
| ccdc93 | ccdc93 | coding | upstream | 253461 | 28028462 ~ 28036764 (+) |
| LOC110501690 | LOC106582058 | coding | upstream | 354909 | 27930952 ~ 27935316 (+) |
| LOC110501688 | LOC106582045 | coding | upstream | 407325 | 27880850 ~ 27882900 (+) |
| LOC110501697 | LOC106582162 | coding | downstream | 411570 | 28701867 ~ 28702664 (+) |
| epha6 | LOC106582188 | coding | downstream | 465493 | 28755790 ~ 28976739 (+) |
| LOC110502085 | LOC106582160 | coding | downstream | 689921 | 28977890 ~ 28984226 (+) |
| LOC110502121 | cld14 | coding | downstream | 703036 | 28993333 ~ 28994549 (+) |
| LOC110501700 | LOC106582186 | coding | downstream | 707466 | 28997763 ~ 29010281 (+) |
| G1796021 | NA | non-coding | upstream | 22110 | 28267880 ~ 28268115 (+) |
| G1796012 | NA | non-coding | upstream | 43393 | 28243618 ~ 28246832 (+) |
| G1796011 | NA | non-coding | upstream | 47965 | 28242039 ~ 28242260 (+) |
| G1795998 | NA | non-coding | upstream | 61821 | 28228155 ~ 28228404 (+) |
| G1795981 | NA | non-coding | upstream | 84241 | 28205744 ~ 28205984 (+) |
| G1796034 | NA | non-coding | downstream | 1032 | 28291329 ~ 28320522 (+) |
| G1796054 | NA | non-coding | downstream | 43922 | 28334219 ~ 28334515 (+) |
| G1796065 | NA | non-coding | downstream | 72391 | 28362688 ~ 28364521 (+) |
| LOC110502084 | NA | non-coding | downstream | 105677 | 28236220 ~ 28400108 (+) |
| G1796101 | NA | non-coding | downstream | 164675 | 28454972 ~ 28458461 (+) |
| G1795550 | NA | other | upstream | 198109 | 28091565 ~ 28092116 (+) |
| G1795411 | NA | other | upstream | 377350 | 27898367 ~ 27912875 (+) |
| G1793717 | NA | other | upstream | 1973982 | 26315826 ~ 26316243 (+) |
| G1793045 | NA | other | upstream | 2558471 | 25731326 ~ 25731754 (+) |
| G1797582 | NA | other | downstream | 1453895 | 29744192 ~ 29744854 (+) |
| LOC118943632 | LOC100194703 | other | downstream | 1633260 | 29917773 ~ 29933035 (+) |
| G1798168 | NA | other | downstream | 2210359 | 30500656 ~ 30545954 (+) |
