Gene
RNA
| Item | Value |
|---|---|
| gene id | trnan-guu-200 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 28720059 ~ 28720298 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnan-guu-200 | False | 74 | mRNA | 0.57 | 1 | 28720059 | 28720132 |
| TU2055949 | True | 200 | lncRNA | 0.48 | 1 | 28720099 | 28720298 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501696 | LOC106582163 | coding | downstream | 171494 | 28538705 ~ 28548565 (-) |
| LOC110502083 | LOC101162407 | coding | downstream | 657376 | 28058893 ~ 28062683 (-) |
| LOC110501691 | LOC106582059 | coding | downstream | 700943 | 28009421 ~ 28019116 (-) |
| LOC110501689 | LOC106582060 | coding | downstream | 807140 | 27903582 ~ 27912919 (-) |
| acbp | acbp | coding | downstream | 881486 | 27834422 ~ 27838573 (-) |
| LOC110501699 | NA | coding | upstream | 99198 | 28819330 ~ 28826708 (-) |
| LOC118943585 | NA | coding | upstream | 604013 | 29324145 ~ 29325269 (-) |
| LOC110501708 | LOC106582177 | coding | upstream | 713420 | 29433552 ~ 29441071 (-) |
| dnajc15 | dcj15 | coding | upstream | 885931 | 29606063 ~ 29619908 (-) |
| tnfsf11 | LOC106582173 | coding | upstream | 986680 | 29706812 ~ 29727741 (-) |
| G1796489 | NA | non-coding | downstream | 13279 | 28706557 ~ 28706780 (-) |
| G1796481 | LOC106582162 | non-coding | downstream | 17302 | 28701932 ~ 28702757 (-) |
| G1796451 | NA | non-coding | downstream | 54045 | 28665761 ~ 28666014 (-) |
| G1796435 | NA | non-coding | downstream | 62580 | 28657258 ~ 28657479 (-) |
| G1796431 | NA | non-coding | downstream | 64517 | 28655216 ~ 28655542 (-) |
| G1796516 | NA | non-coding | upstream | 13576 | 28733708 ~ 28733948 (-) |
| G1796546 | NA | non-coding | upstream | 35010 | 28755142 ~ 28755391 (-) |
| G1796687 | NA | non-coding | upstream | 35876 | 28756008 ~ 28756257 (-) |
| G1796695 | NA | non-coding | upstream | 72260 | 28792392 ~ 28792604 (-) |
| G1796699 | NA | non-coding | upstream | 75978 | 28796110 ~ 28796315 (-) |
| G1796401 | NA | other | downstream | 93168 | 28626138 ~ 28626891 (-) |
| G1796239 | NA | other | downstream | 281288 | 28434915 ~ 28451815 (-) |
| G1796204 | NA | other | downstream | 385438 | 28334224 ~ 28334621 (-) |
| G1795850 | NA | other | downstream | 738680 | 27980664 ~ 27981379 (-) |
| G1797146 | LOC106582182 | other | upstream | 491532 | 29211664 ~ 29243649 (-) |
| G1797556 | NA | other | upstream | 939335 | 29659467 ~ 29660947 (-) |
| LOC110501714 | LOC106582170 | other | upstream | 1118145 | 29835498 ~ 29846456 (-) |
| G1797936 | NA | other | upstream | 1251426 | 29971558 ~ 29978535 (-) |
