LOC110502121 (cld14)


Basic Information

Item Value
gene id LOC110502121
gene name cld14
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 28993333 ~ 28994549 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579991.2
gtgtagcaTTGTGTAGTTTTGTGTGTGCAGTTGGTCATTAGCGGATGTTCCAAACATGGCCAGCATGGCGGTCCAGCTGCTGGGCTTCTTCCTGGGTCTGCTGGGGCTGGTGGGTAGTGTAGTTGCTACAGTGCTCCCCCACTGGTGGCGGACGGCCTATGTGGGCTCTAACATAATCACAGCCACTGCCTACATGAAGGGGCTCTGGATGGAGTGTGTGTGGCACAGCACGGGCATCTACCAGTGTGAAGTACATCGCTCAATGCTGGCTCTGCCACCTGACCTGCAGGCGGCACGGGCGTTGATGTTGCTGTCCTGCCTGACCTCCACCCTGGCAGCCCTCGTGTCCTCTGCAGGGATGAAGTGTACCCGCTGTGCCCGCGGCTCATCCATCAAGCATGTCCTGGCCATCAGTGGAGGGGTCTGCTTCCTGTCTGCAGGCATGCTCTGCCTAATCACTGTCTGCTGGACAACCAATGATGTCATCCTCGACTTCTACAACCCCGTCCTACCTGAAGGTATGAAGTATGAGCTTGGCATGGCGGTGTATTTGGGCTATGTCTCGGCCTGTCTTAGTCTGATGGGAGGGGTGGTGCTCTGTTGGAACTGTGAGGGGCGGCCCAGGAACCCCCTACATCTACCTCATCATCGCCACCCTTGTCCTCCCCTCGTCTTCAACACTATAAACACCCCCAACACCCCAGCACCCCCTTACTATCCCCCTGCCGCCCTGAAAGGGAACTACGCCCCCTCATGCACCTCACTGTCCAGCAATGGCTACAGACTCAATGACTACGTCTGAGAGATAGAGTACACACTCAATGAATGCTCCTAGTGTGGAAGTGCAAACACAAATGATTATGTCTGAGTGTGGCAGATAATAGAAACTGATTGAGGGAAGTTTAAACTCAATGACTACAAAAAACAGACTTGAGTTACTTTTAAG

Function

NR:

description
claudin-14-like

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0005923 bicellular tight junction cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005198 structural molecule activity molecular_function

KEGG:

id description
K06087 CLDN; claudin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579991.2 True 946 mRNA 0.54 3 28993333 28994549

Neighbor

gene id symbol gene type direction distance location
LOC110502085 LOC106582160 coding upstream 12132 28977890 ~ 28984226 (+)
epha6 LOC106582188 coding upstream 16594 28755790 ~ 28976739 (+)
LOC110501697 LOC106582162 coding upstream 290669 28701867 ~ 28702664 (+)
LOC110502084 NA coding upstream 596983 28236220 ~ 28400108 (+)
trnaa-ugc-174 NA coding upstream 703036 28290225 ~ 28290297 (+)
LOC110501700 LOC106582186 coding downstream 3214 28997763 ~ 29010281 (+)
LOC110501701 LOC106586531 coding downstream 69090 29063639 ~ 29094498 (+)
LOC110501702 LOC106582183 coding downstream 107564 29102113 ~ 29167753 (+)
LOC110501703 LOC106582182 coding downstream 184322 29178871 ~ 29212842 (+)
LOC118943584 LOC106582182 coding downstream 233122 29227671 ~ 29243652 (+)
G1796683 NA non-coding upstream 6460 28986572 ~ 28986873 (+)
G1796642 NA non-coding upstream 52195 28932411 ~ 28941138 (+)
G1796636 NA non-coding upstream 96457 28896642 ~ 28896876 (+)
G1796685 NA non-coding downstream 5032 28999581 ~ 28999793 (+)
G1796835 NA non-coding downstream 25494 29020043 ~ 29020596 (+)
G1796839 NA non-coding downstream 30069 29024618 ~ 29025673 (+)
G1796841 NA non-coding downstream 32526 29027075 ~ 29027468 (+)
G1796862 NA non-coding downstream 48601 29043150 ~ 29043457 (+)
G1795550 NA other upstream 901217 28091565 ~ 28092116 (+)
LOC110501693 LOC106582057 other upstream 955255 28036917 ~ 28052019 (+)
G1795411 NA other upstream 1080458 27898367 ~ 27912875 (+)
G1793717 NA other upstream 2677090 26315826 ~ 26316243 (+)
G1797582 NA other downstream 749643 29744192 ~ 29744854 (+)
LOC118943632 LOC100194703 other downstream 929008 29917773 ~ 29933035 (+)
G1798168 NA other downstream 1506107 30500656 ~ 30545954 (+)
G1798397 NA other downstream 1894112 30888661 ~ 30891067 (+)

Expression


Co-expression Network