frzb (LOC106582261)


Basic Information

Item Value
gene id frzb
gene name LOC106582261
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 31288287 ~ 31292216 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579521.2
GGTCCCGCACTGTGCGGTCACTGCGATTCCAGCGAGCAATCACTGCAGCGCAAACTGGTCtggggaggaagggatagagagagcggAGCCACCACCCCAGCCCACTTCCACCCGCAATATGATCACACACGCGCCGATGGAATAAGCAACAAAAGAACAGTGGGAAAACTAAAGgaatctccacgttgtctcccgcTAGGAATTCGATTCGAATCGGCTTTGTTGTTTTGGTTTTACGCACGAAAGATGACTTTCGCTCCTCGTTCCTTCTACGTGACGCTAAGTTTGGACACGTCCAGGTAGACAGACAACTTTCGACAGCAACTTTAGGGCTATAGATTTTAGGATTGCATTGAAGTTTATCCATGCCTACTTCATAACCAGGCATTGCATTTagctttcattttttttaaattttgttATCCGAAACCACCTGTCTGAATATAACTGAGGATGATCATGTTTTCACACGAGTTCTTCGTCTCCTTCCTCGCGGTTACCTGTCTGTTTGGGATACCCAGAGCGTCCGCAGCGGCTTGCGAGCCCATCCGGATCCCACTGTGCAAGTCCATGCCCTGGAACATGACGAAAATGCCCAACCACCTCCACCACAGCACCCAGGCGAACGCAGTCTTAGCGATTGAGCAGTTTGAAGGGCTTCTTGGCACTCAGTGCAGTCCAGATTTACTGTTCTTTCTGTGCGCAATGTACGCTCCAATATGCACTATTGACTTCCAACACGACCCTATCAAGCCATGCAAGTCGGTGTGTGAACGGGCGAAGTGCGGCTGTGAACCGGTGATGAAGCGGTATAATCACACCTGGCCAGAGAGCTTGGCCTGCGAGGATCTGCCAGTCTATGACCGGGGAGTCTGCATCTCGCCAGAGGCCATTGTCAAAGCAGAAGGACCAGACAACCCCTATTATCAAGACCCCTCAAAATGCTCACCTGAATCAACTCCTGACTTTCCAAGTGACTCTCACAATGTGAACTGTAAAGGAGCCAACAATGATCGATGCAAGTGCAAGTCGGTAAGACTGGGTCTCAAGACCTACCTAAAGAGTAATTACAACTATGTGATTCGTGCGAGGGTGAAGGAGATTAGAAGCAGAAATCATGATCTGAGTGCCATCGTGGAGGTCAAAGACATCCTGAAGTCTTCCTTAGTGAACATCCCTCGTGATACAGTCACACTGTACTACAACTCTGGCTgtccctgtcctcctctcactGCCAACGACGAGTACATCATCATGGGTTACGAGAACGAGGAGAGATCCAGACTTCTGCTCATCGAAGGCTCCATTGCACAGAAGTGGAAGGACCGTATGGGGAGGAAGGTGAGGCGTTGGGACCAGAGCCGAGGGAACTCGGGGAGAAGCAATATGCGGAGGAGCCGCCACTGATCAACCAAGACGCGTCCCTGTGCAGTGATGATCGGGTTGCAAAATTCCAccaactttcccaaaattccaaGTTTTCTGGAATCAGGGGGGAATAAGCAAGAAATATGTAATCCTCCAACTGGGAAttctgggaatttggggaaagttaccagaatGTTGCAACCCTAAATGATGACATATGGGACAACATATGGAGATAGAAAGAAAAGTGTTTGCAGACAGAAAACTGAAATTGCACTATTGCACGTTTTATTTTTCAAAACTGTTGTAGCTGAATGTAGATTATTTTTTAGTTGTTGCTTTGTTTTGTATTATATTTGTTTATAATTcttttttgagtgtgtgtgttttcataattttttttGCACAAACAAAATGTTCATTTAACAGTGctgagtgtgtgtacagttggACGAGACTTGCGAGGGACTTTACTGGAAGAGTGACAGGGACTTTATCCTACATGGCACCCTATTAACTATATAGGGAACTTTGGACTTGGcccaggctctggtcaaaagtagtgaactatataggaaatagggtgtcatttaggatgcacaATGGTCTTAGCACAGCATTATGTTAGAAGCACTCTAAAGAAAAATGATGAATATTTATCTAGCAGCTAGAGACTGCACATGGGATGAAGTGGATGTCTTTAAGATACCAAAGTGCTTTTATGATGGGGTGCTCTGTTATGCTTTATTTCTTTTAAAGGAAACACAAACAAGTTGTAATCTGGCTATTTTACACTACAAGAGGATTTAACATGTTTCAAAGGAGAAAAATGAACAAAGGATGAGGAAggtgggagggaggcagggacatATGTTTTTGTCAGTATGCGAAGAAAGGTCAGATTGATCCAAGAAGACAGAGTATATGTCATTGAAGACAACACAAAACACGACAACATTGAGCTATTGAAATAATGATTGCATTACATGTaatatgtctccctctctctctctttttctctctctctggaacaAATGTTTGAATTGCTTTCTTATATGTCTCATGCTTTGGAGCTCTGATGATTTGCTAAGTGTCTTTCTTCCGGTCGTTTTTGGTGCTTCGGGTTTTTCTAAACTGAACTGTAGTTTTATACTTCTCATATACATCACTCTGGTTTGTCTTCGTACacaacatacatacatatataaatCTATGAAATGCTAACCAGCTCAATTGTGATTTTAAATCTGATTTGAGTGCTTTATTAAACATTGTCTGGCTGGTGTCATATCCAAC

Function

NR:

description
secreted frizzled-related protein 3-like

GO:

id name namespace
GO:0008406 gonad development biological_process
GO:0060429 epithelium development biological_process
GO:0090090 negative regulation of canonical Wnt signaling pathway biological_process
GO:0007409 axonogenesis biological_process
GO:0007420 brain development biological_process
GO:0001944 vasculature development biological_process
GO:0060056 mammary gland involution biological_process
GO:0009790 embryo development biological_process
GO:0032589 neuron projection membrane cellular_component
GO:0005615 extracellular space cellular_component
GO:0005737 cytoplasm cellular_component
GO:0030165 PDZ domain binding molecular_function
GO:0042813 Wnt-activated receptor activity molecular_function
GO:0017147 Wnt-protein binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579521.2 True 2664 mRNA 0.44 6 31288287 31292216

Neighbor

gene id symbol gene type direction distance location
LOC110501748 LOC106582253 coding downstream 245985 31037006 ~ 31042302 (-)
LOC110501746 LOC106582248 coding downstream 265338 31004699 ~ 31022949 (-)
LOC110501744 LOC106582250 coding downstream 288695 30995324 ~ 30999592 (-)
LOC110501745 lrrc63 coding downstream 320538 30965268 ~ 30967749 (-)
LOC110502090 LOC106586488 coding downstream 324684 30960714 ~ 30963603 (-)
LOC110501754 LOC106582262 coding upstream 3684 31295900 ~ 31363691 (-)
LOC110501758 ppr1c coding upstream 252112 31544328 ~ 31567507 (-)
itprid2 ssfa2 coding upstream 280601 31572817 ~ 31618605 (-)
itga4 itga4 coding upstream 443871 31736087 ~ 31774012 (-)
ube2e3 ub2e3 coding upstream 652358 31944574 ~ 31998351 (-)
G1799378 NA non-coding downstream 25498 31262405 ~ 31262789 (-)
G1799371 LOC106582260 non-coding downstream 31240 31255653 ~ 31257047 (-)
G1799327 NA non-coding downstream 97270 31190798 ~ 31191017 (-)
G1799326 NA non-coding downstream 97785 31190082 ~ 31190502 (-)
G1799325 NA non-coding downstream 98246 31189728 ~ 31190041 (-)
G1799464 NA non-coding upstream 153447 31445663 ~ 31446022 (-)
G1799657 NA non-coding upstream 290443 31582659 ~ 31583118 (-)
G1799679 NA non-coding upstream 334344 31626560 ~ 31626781 (-)
G1799683 NA non-coding upstream 339168 31631384 ~ 31631595 (-)
G1800232 NA non-coding upstream 456707 31748923 ~ 31749178 (-)
G1799132 LOC106582249 other downstream 292985 30976894 ~ 30995302 (-)
G1798869 NA other downstream 768615 30486989 ~ 30519672 (-)
G1798781 NA other downstream 1127601 30160234 ~ 30160686 (-)
G1801195 NA other upstream 1411584 32703800 ~ 32704323 (-)
G1801071 NA other upstream 1467642 32759858 ~ 32777777 (-)
G1801352 NA other upstream 1658251 32950467 ~ 32953670 (-)
G1801331 NA other upstream 1666106 32958322 ~ 32960485 (-)
bard1 bard1 other upstream 3226290 34473620 ~ 34544232 (-)

Expression


Co-expression Network