trnaa-ugc-175


Basic Information

Item Value
gene id trnaa-ugc-175
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 32997434 ~ 32997509 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc-175
ggtcctgtgtggctcagttggtagagcatggtgcttgcaacaccagggttgtgggttcaattcccatgtaggtcca

Function

NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-175 True 76 mRNA 0.54 1 32997434 32997509

Neighbor

gene id symbol gene type direction distance location
LOC110501783 kansl1l coding upstream 4424 32964607 ~ 32993010 (+)
LOC110501782 LOC106582283 coding upstream 36934 32939577 ~ 32960500 (+)
LOC110501780 LOC106582282 coding upstream 88734 32904230 ~ 32908700 (+)
LOC110501779 LOC106582281 coding upstream 98416 32882915 ~ 32899018 (+)
LOC110501777 LOC106582279 coding upstream 151261 32817077 ~ 32846173 (+)
LOC118943604 NA coding downstream 199096 33196605 ~ 33199316 (+)
trnaa-ugc-176 NA coding downstream 797516 33795025 ~ 33795098 (+)
LOC110501788 vwc2l coding downstream 1466224 34463733 ~ 34499490 (+)
LOC110501792 LOC106582299 coding downstream 1605370 34602879 ~ 34772042 (+)
LOC110501793 LOC106582300 coding downstream 1783996 34781505 ~ 34790502 (+)
G1800761 NA non-coding upstream 78747 32918069 ~ 32918687 (+)
G1800759 NA non-coding upstream 94284 32902926 ~ 32903150 (+)
LOC110502125 LOC106582208 non-coding upstream 180676 32811982 ~ 32816908 (+)
G1800724 NA non-coding upstream 186084 32811080 ~ 32811350 (+)
G1799951 NA non-coding upstream 908876 32087155 ~ 32088558 (+)
G1800800 NA non-coding downstream 173730 33171239 ~ 33176016 (+)
G1800801 NA non-coding downstream 178565 33176074 ~ 33180752 (+)
G1801513 NA non-coding downstream 219778 33217287 ~ 33217504 (+)
G1801521 NA non-coding downstream 225514 33223023 ~ 33223281 (+)
G1801549 NA non-coding downstream 247331 33244840 ~ 33245183 (+)
G1800754 NA other upstream 83252 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 623253 32317123 ~ 32374208 (+)
G1798597 NA other upstream 1700015 31293552 ~ 31297419 (+)
G1798579 NA other upstream 1705229 31246481 ~ 31292205 (+)
G1798397 NA other upstream 2106367 30888661 ~ 30891067 (+)
LOC110501795 LOC106596205 other downstream 2742930 35740427 ~ 35760519 (+)
G1804873 NA other downstream 2877053 35874562 ~ 35875452 (+)
G1805191 NA other downstream 3366087 36363596 ~ 36363930 (+)
LOC110501805 dirc2 other downstream 3437491 36435000 ~ 36520762 (+)
LOC110501842 LOC106586352 other downstream 5082357 38079807 ~ 38213191 (+)

Expression


Co-expression Network