XLOC_036986 (gmppaa)


Basic Information

Item Value
gene id XLOC_036986
gene name gmppaa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 10770880 ~ 10780660 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072806
ATGCTGAAGGCTGTCATTCTTATCGGAGGCCCCCAAAAAGGGACCCGCTTTCGGCCACTGTCTTTTGAAGTGCCCAAACCTCTGTTTCCAGTGGCCGGAGTGCCAATGCTGCAGCATCACATTGAGGCCTGCTCTAAGCTTCCAAATATGAAGGAGATCTTACTCATTGGCTTTTATCAGCCCAATGAAGAACTAAACAGATTTTTGTCATGTGCCCAACAAGATTTTAAAATATCAATAAGATATCTTCAGGAATATGCTGCTCTGGGAACTGGAGGAGGAATCTACCATTTCAGAGATCAGATCTTGTCTGGAGGTCCAGATGCATTTTTTGTCATGAATGCTGACGTGTGCTCAGAGTTTCCTCTACCAGAGATGCTGGACTTCCAGAAGGAGCATGGAGACACCTACAGCTTTGTCATCCTCGGCACCACTGCCAACAGAAAACAGTCCCTGAATTATGGCTGTATTGTTGAGAATGAGCAAACTGATGAGGTCTTGCATTATGTAGAGAAGCCCGGCACATTTGTGAGCGACATCATCAACTGTGGAATATACCTGTTTACTCCGGAGATTTTCCAGCACATTGGATCAGTTTTCCAGAAGAACCAGCAGGAAATGTTGTTAGAGGAGCAGTCTAACGGCTGGCATCGAGCAGAGGTGATCCGTCTGGAGCAGGACATCTTCACTGCTCTGGCAGGGCAGGGCAAGCTTTACGTGTACAAAACAGACCGATTCTGGAGCCAGATCAAATCTGCTGGATCTGCGATTTATGCAAGCCGTTTGTATCTGAATCAATATCACAAGACACATCCAGAGAGGTTAGCTACTAATACAGAGGGAGGAGCAAAGACCAGAGGAAATGTTTACATTCATCCCACTGCCAACATTGATCCTACTGCTGTGttaGGTCCGAATGTGTCAATAGGAACAGGCGTAACGATCGGTGCAGGAGTTCGTGTGAGGGAGTCCATCATCCTTCATGGTGCTACCTTACAAGATCACAGCTGCGTGCTGAACAGCATTGTGGGTTGGGAAAGCACCATTGGCAAATGGGCCAGAGTGGAGGGAACTCCCAGTGACCCCAATCCTAATGACCCATACGCCAAAATTGACAGCGAGACGCTCTTCAGAGATGGAAAGCTAACTCCTTCCATTACAATTCTAGGCTGTAATGTAAACATCCCGTCTGAGGTCATCATACTCAACTCTATCGTCCTGCCGCACAAAGATCTCAACAGAAGCTTTAAGAACCAGATCATACTGTAGTTCCACTATTGTGAGTAGTTTGGGCATTtggatataaacaaaaaaaaataaataaatgttatggtTTAGATGTTAAAATGTTTGGTGATGTGTAGAGTGCAGATGGATTTACCAGATGTGTTATGATGCCAAAGCTGGATAAAAAGAAACATAAGAAAAGTGTTTTTGAAATGacttgaaatgttttatttgctGTTGGCTCGTGGCAATGAAATGTCAAAATGAAATGCTATTTGTGAACTCTGTTACCATTTTTTTTCAGCAATGAATATATGTAGCACAAAAAAGGGAAGACAAATGGTAAAATCTTGTAATTGCAGACCAGCCGTGTTggtaattgttttgaataattgaTGTTTCTGTGACTGCTCCCTGTATGAAAGCTGAGCAGAGTGCAAGATTTAGACATCggcaataaattatattttgattaagtcaCAAAGGGTAATAAAGGGATTCACTGCTGCCCTTGTAGAAATCACAGTCTGTATTTATGGTGTAAGAGCTACATGAGCATCAATTATTTTTTACCTAACCTTGACGGTTGAGACAAATTAACTAAAGACTTCACATCATTTTTTTCAgaggtgacaaaaaaaaaaatctaagaacaGTTTAACAACTGATAAAATTTCCCACAGCTTTTCATTTATACAGTATACCATGAATActtatgtatatttaaattgtTACATAATTTATAGTTTTACACTACATAAAACTgtgtacactcaccagccactttgataggtacacctgtccaactgctcgtaaaCGGAGATttttaattagccaatcacatggcagcaattctaTGTAGACATTTGGACATGGTCAATACGATCGgcagcagttcaaactgagcatcagaatggggatgaaaGATAATTTCAGTGACTtggaacgtggcatggttgttggtgccagacgttctgagtatttcagagactgctgatctactggaattttcaaccaaaccatctctagggtttacagggaattttctgaaaaagagaaaatatccagtgtgcGGCAATTCAGTGgaagcaaatgccttgttgatagaggagaatggccagactggtttaaactaatagaaaggcaaccgtaactcaaaaaaaaaaaaaaactacttgttACAacctgaggtatgcagaagagcatctctgaatgcacaacatgtccaaccttgaggtggattggctacaccaggtgccactcctgtaagcAAGAGCAAACAAGAAACAAttcacacaagctcaccaaaattggacaatagaagattggaaaaacatttgctggtctgatgagtctctatttctgctgcaacgttcggaaggtagggtcagaatttagcgtcagcaacatgaaagcatggatccttcCTGCCTTGTTTCAGCGGTTCAGtctagtggtggtgtaatggtgttggggatattttcttggcacattttgggcctattagtaccattTAAGCATTgagtcaacgccacagcctacagtgcctgattattgttgctgaccgtgtgcatccctttatgaccacagtatacccatctactgatggctacttATGGTAGGaaaatgcaccatgtcataaagcacaaatcatctcagactggtttcttgaacttgacaatgagttcactgtacacaaatggcctacacagtcaacagaactcaatccaatagagcacttttggaatGTTTTGGAACAGGAGgttcgcatcatagatgtgcagccaacaaatctgcatccACTGCaagatgctgtcatgtcaatatggaccaaaatctcagaaaAATATTAACAGTTCCGTGTTGAATCCatgacatgaaggattaaggcagttttgaa
>TCONS_00072805
ATGCTGAAGGCTGTCATTCTTATCGGAGGCCCCCAAAAAGGGACCCGCTTTCGGCCACTGTCTTTTGAAGTGCCCAAACCTCTGTTTCCAGTGGCCGGAGTGCCAATGCTGCAGCATCACATTGAGGCCTGCTCTAAGCTTCCAAATATGAAGGAGATCTTACTCATTGGCTTTTATCAGCCCAATGAAGAACTAAACAGATTTTTGTCATGTGCCCAACAAGATTTTAAAATATCAATAAGATATCTTCAGGAATATGCTGCTCTGGGAACTGGAGGAGGAATCTACCATTTCAGAGATCAGATCTTGTCTGGAGGTCCAGATGCATTTTTTGTCATGAATGCTGACGTGTGCTCAGAGTTTCCTCTACCAGAGATGCTGGACTTCCAGAAGGAGCATGGAGACACCTACAGCTTTGTCATCCTCGGCACCACTGCCAACAGAAAACAGTCCCTGAATTATGGCTGTATTGTTGAGAATGAGCAAACTGATGAGGTCTTGCATTATGTAGAGAAGCCCGGCACATTTGTGAGCGACATCATCAACTGTGGAATATACCTGTTTACTCCGGAGATTTTCCAGCACATTGGATCAGTTTTCCAGAAGAACCAGCAGGAAATGTTGTTATATTCATACGAGGGAGAGGAGCAGTCTAACGGCTGGCATCGAGCAGAGGTGATCCGTCTGGAGCAGGACATCTTCACTGCTCTGGCAGGGCAGGGCAAGCTTTACGTGTACAAAACAGACCGATTCTGGAGCCAGATCAAATCTGCTGGATCTGCGATTTATGCAAGCCGTTTGTATCTGAATCAATATCACAAGACACATCCAGAGAGGTTAGCTACTAATACAGAGGGAGGAGCAAAGACCAGAGGAAATGTTTACATTCATCCCACTGCCAACATTGATCCTACTGCTGTGttaGGTCCGAATGTGTCAATAGGAACAGGCGTAACGATCGGTGCAGGAGTTCGTGTGAGGGAGTCCATCATCCTTCATGGTGCTACCTTACAAGATCACAGCTGCGTGCTGAACAGCATTGTGGGTTGGGAAAGCACCATTGGCAAATGGGCCAGAGTGGAGGGAACTCCCAGTGACCCCAATCCTAATGACCCATACGCCAAAATTGACAGCGAGACGCTCTTCAGAGATGGAAAGCTAACTCCTTCCATTACAATTCTAGGCTGTAATGTAAACATCCCGTCTGAGGTCATCATACTCAACTCTATCGTCCTGCCGCACAAAGATCTCAACAGAAGCTTTAAGAACCAGATCATACTGTAGTTCCACTATTGTGAGTAGTTTGGGCATTtggatataaacaaaaaaaaataaataaatgttatggtTTAGATGTTAAAATGTTTGGTGATGTGTAGAGTGCAGATGGATTTACCAGATGTGTTATGATGCCAAAGCTGGATAAAAAGAAACATAAGAAAAGTGTTTTTGAAATGacttgaaatgttttatttgctGTTGGCTCGTGGCAATGAAATGTCAAAATGAAATGCTATTTGTGAACTCTGTTACCATTTTTTTTCAGCAATGAATATATGTAGCACAAAAAAGGGAAGACAAATGGTAAAATCTTGTAATTGCAGACCAGCCGTGTTggtaattgttttgaataattgaTGTTTCTGTGACTGCTCCCTGTATGAAAGCTGAGCAGAGTGCAAGATTTAGACATCggcaataaattatattttgattaagtcaCAAAGGGTAATAAAGGGATTCACTGCTGCCCTTGTAGAAATCACAGTCTGTATTTATGGTGTAAGAGCTACATGAGCATCAATTATTTTTTACCTAACCTTGACGGTTGAGACAAATTAACTAAAGACTTCACATCATTTTTTTCAgaggtgacaaaaaaaaaaatctaagaacaGTTTAACAACTGATAAAATTTCCCACAGCTTTTCATTTATACAGTATACCATGAATActtatgtatatttaaattgtTACATAATTTATAGTTTTACACTACATAAAACTgtgtacactcaccagccactttgataggtacacctgtccaactgctcgtaaaCGGAGATttttaattagccaatcacatggcagcaattctaTGTAGACATTTGGACATGGTCAATACGATCGgcagcagttcaaactgagcatcagaatggggatgaaaGATAATTTCAGTGACTtggaacgtggcatggttgttggtgccagacgttctgagtatttcagagactgctgatctactggaattttcaaccaaaccatctctagggtttacagggaattttctgaaaaagagaaaatatccagtgtgcGGCAATTCAGTGgaagcaaatgccttgttgatagaggagaatggccagactggtttaaactaatagaaaggcaaccgtaactcaaaaaaaaaaaaaaactacttgttACAacctgaggtatgcagaagagcatctctgaatgcacaacatgtccaaccttgaggtggattggctacaccaggtgccactcctgtaagcAAGAGCAAACAAGAAACAAttcacacaagctcaccaaaattggacaatagaagattggaaaaacatttgctggtctgatgagtctctatttctgctgcaacgttcggaaggtagggtcagaatttagcgtcagcaacatgaaagcatggatccttcCTGCCTTGTTTCAGCGGTTCAGtctagtggtggtgtaatggtgttggggatattttcttggcacattttgggcctattagtaccattTAAGCATTgagtcaacgccacagcctacagtgcctgattattgttgctgaccgtgtgcatccctttatgaccacagtatacccatctactgatggctacttATGGTAGGaaaatgcaccatgtcataaagcacaaatcatctcagactggtttcttgaacttgacaatgagttcactgtacacaaatggcctacacagtcaacagaactcaatccaatagagcacttttggaatGTTTTGGAACAGGAGgttcgcatcatagatgtgcagccaacaaatctgcatccACTGCaagatgctgtcatgtcaatatggaccaaaatctcagaaaAATATTAACAGTTCCGTGTTGAATCCatgacatgaaggattaaggcagttttgaa

Function

symbol description
gmppaa Predicted to enable GTP binding activity and mannose-1-phosphate guanylyltransferase activity. Predicted to be involved in GDP-mannose biosynthetic process. Predicted to act upstream of or within biosynthetic process. Orthologous to human GMPPA (GDP-mannose pyrophosphorylase A).

GO:

id name namespace
GO:0009298 GDP-mannose biosynthetic process biological_process
GO:0009058 biosynthetic process biological_process
GO:0005575 cellular_component cellular_component
GO:0004475 mannose-1-phosphate guanylyltransferase activity molecular_function
GO:0016740 transferase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0016779 nucleotidyltransferase activity molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040704-37 Predicted to enable GTP binding activity and mannose-1-phosphate guanylyltransferase activity. Predicted to be involved in GDP-mannose biosynthetic process. Predicted to act upstream of or within biosynthetic process. Orthologous to human GMPPA (GDP-mannose pyrophosphorylase A).

Ensembl:

ensembl_id ENSDARG00000024112

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072806 False 3127 mRNA 0.42 12 10770880 10780660
TCONS_00072805 True 3142 mRNA 0.42 13 10770880 10780660

Neighbor

gene id symbol gene type direction distance location
XLOC_036985 NA coding upstream 10767 10737086 ~ 10760113 (+)
XLOC_036984 dars1 coding upstream 11367 10699038 ~ 10759513 (+)
XLOC_036983 cxcr4b coding upstream 75950 10692905 ~ 10694930 (+)
XLOC_036982 NA coding upstream 205934 10562638 ~ 10564946 (+)
XLOC_036980 BX936345.1 coding upstream 426900 10343864 ~ 10343980 (+)
XLOC_036987 NA coding downstream 156113 10936773 ~ 10938469 (+)
XLOC_036988 asic4a coding downstream 253654 11034314 ~ 11229565 (+)
XLOC_036989 wnt6b coding downstream 501309 11281969 ~ 11341315 (+)
XLOC_036990 wnt10a coding downstream 599122 11379782 ~ 11409691 (+)
XLOC_036991 CR847976.1 coding downstream 667117 11447777 ~ 11447909 (+)
XLOC_036979 NA non-coding upstream 613333 10155978 ~ 10157547 (+)
XLOC_036976 NA non-coding upstream 873923 9893106 ~ 9896957 (+)
XLOC_036995 NA non-coding downstream 1680959 12461619 ~ 12469043 (+)
XLOC_036996 CR752651.1 non-coding downstream 2047345 12828005 ~ 12828120 (+)
XLOC_037004 CR407547.1 non-coding downstream 2667869 13448529 ~ 13448648 (+)

Expression


Co-expression Network