LOC110501805 (dirc2)


Basic Information

Item Value
gene id LOC110501805
gene name dirc2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 36435000 ~ 36520762 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579640.2
ATGGGTTGTTATTGTTTCTCTGGGCAACTGATATTGAAGTTAGATACATTTGTTGCCATTGTGTAATCGAATATTGGACATCGCGCGCGGATTAAGTCACTGCTGAACGAACGCTACGTTGTATGAAATGCGATGGGTGCTGCATCGAGCACCGAGGGCGAAAGGGAACCACTTATCTTTCCTCCTAACCCCGAGACGAGCATTCAGCCAGTTTACAGCCGAGTCTACGGGAGAAGATGGCTGGTTCTGACTCTATTTTCTTTGCTGGCGTTCATGCAAGGGATGGTATGGAACACTTGGGGCCCAATTCAGAACTCTGCCATTCACGCGTATGATTTCGCCAAATCTGACATCGCGGTGCTGGTTCTGTGGGGACCAGTTGGATTCACTCCTTGGCTGCTATTTATGTGGCTGATGGACAAGAAAGGTCTGCGGGCGTCTCTTTTACTGTCAGTCTTCTTCATGGTGATGGGGGCAGCGCTGCGTAGTGTCCCTGTACCAGACCTACAACTAAGGCGATGgttAATACACGGTGGTCAGCTGTTGAATGGTTTGGCCGGACCAACAATAATGAGCGCTGgacccctcctctccaccacatGGTTCGCGCCAGACCAGAGAGCCACAGCCACCGCTGTCGCCTCATTGGTCAGCTATCTGGGGGCGGCGTGCTCCTTCATTGTCGGCCCGCTGCTTGTGCCCGCCCCTAACGACACCACCCGTGTCATGGTGGCCCGAGCTGTTGTCTCGACAGACACCCAGATCAATCACATACGAGACAGGATTCAGCTGGTTTTGTATGCAGAGCttggtgtggtggtggtgctgtttgCTGCGGTGCTGTTCTACTTCCCCTCCCGGCCCCCCAGACCCCCCAGTGTAGCCGCTGCCAGCCAGAGACTCCGCTACAGCAGCAGCATCTGCAGACTACTCAGTAATTTCCGGTTCCTGATGATAGCGTTGGCCTACGCGGTGCCTACAGGAGTGGTGGCAGGCTGGTCAGGAGTTCTGGACATGATCCTCACCCCTGCCAGAGtcagccaggtggATGCTGGCTGGATTGGGTTCTGGTCTGTCGTGGGCGGCTGTGTATTTGGAGTGGCCATGGCCAGgtTTGCAGACTCTATCCGGGGCATGCTGAAGCTCATCCTGGTCCTGATGATGGCTGGGGCTTCCCTGGCCTCCACCTGGTTCACACTCACTTGTCTAACCAGGCTCACACACCTACCCTCCACTGCAGccacCCTGTACACCTCCTGTATCGTATTGGGCATCTTCATCAACAGTAGTGTGCCCATCTTCTTTGAGCTCTTAATCGAGACCGTGTACCCCGTGCCCGAGGGCATCACCTGCGGGGTGGTCACCTTCCTCGGTAACCTGGTCACCGGctgcctcctcttcttcctcacctTCTACACCACAGATTTGTCGTGGCTGAACTGGTGTCTGACGGGCTCCTGTGCCTTCAGCCTGgtcctcatcctcttcttcagGGAATCCTACGACCGCCTCTACCTCGACGTCTTCGTCTCAGTCTGACAGACAACAAACAAACTGACCCAGGAGGAAAACAAAGACTGGAACAGTGTTAAACACATTGCACAAAGAAGAGGAGAAAAATAAGCCCCCTTTTTGACCTTATAATAATTAGAACTAACTGTAGTTGTAAATGTGTTATATGACGGTGGTCGTTGAGGCATTGTGATTTCCATGTAGCCAATGAGAAGAGCTGAAGAGCCGAGGGCCTCAGACAGTTAGTCATTCATGTTTAACTGTAAGGGACTGTTTGTCCTGCTGGCCTGGTCCTCAGATACAGCATCGTCTTTTTCTTTTTCGTAGTGTAAAGTTCAAATTACAGTTGAACCGTTGTTTTTTTAACCCGGTCATGGCATGATGAGGGACTGTTGTTGTTTACAGAAGTAATGTCTAAAGAGGCACTCTGTGGCAGGTGACCTGTGACCTGGCTGTTCTCTGGTTTTAATCAGGAAGGAGAGGCATGATTGGCTGAGGAGCTCTAGCAGCCAATCAACAGGCCCAACCGTGCCCGTCTATTCTAACAAGGGACCGCATAGCGTTTTAGTGTCACTCATAACTGCTGGTTATGAATGGCAGGGGGGAAACTGTCAAACTGAGCTGTTCTGCAAATGACCTGTGTACCTGTCGTTGAATAGTGACATATGAGCTCCCttttttaacccccccccccctctctctcaaggAATATTATGCAAGACTGATAATGACAAACCGTTCCTCCCCTcctgcatttatatatttttaaaatctcCCTATTGAATTGATTGGTCCCTGCCAGTGTCGTGGGCCGTGATTGAATGAGCCCCATTGAGTGTCTCTCTCAGCATGCAAAGTCAgaactctctctgtgtatttcgaGGCTCTGCTGTGCATTAGCAGTTGATAATGAGGAAGTAGGAAGTAGCAGTTTCCCCATTGTGATCTTTCAGCTTTGTTAAAGAAACTGACTACAGGAGTTTTGTTTCCGAGTTGGTTATGATGTAGACATTTTAGAAGATGTTCTCAAATGTTATTTTCTTAGTTTTTAGTTTGTTTTAATATGTGGGAGATTTTTTCCAATTTCAACTTGACAATGCATTCTTTTTTTTCTATATTCCTCAGTAGACATGTCTGTTATTATTCCAGATATTTATGCATTGAGGGATCAGAACACTAACACAGTTGATAACAGTAACAGACAAATACAAGAGACGCTATAATGAAATATGGGAATACTGCTTTCTGTTGCCCAGCTGAGAAGTGGCTGATTCTGTATGGAAATGTGGTAATGGAGCCACATAACATAACCAGGAAGCTGGTCTACATGTAATGCACAACGTTCACCAGCAGGGAGCGCTGTGCTGGGGACACTGATAAAATAGGGAGTGGTTCTGTTAGCAGCTCTTTCCCTGGCATGCATGGAGTTGGTGGTGATGCTTCCCACCAAATACAAAACAGACGCGTAACAGACGCTCAGAAAAGTGACATCCACAGAAAAGACAGGAACAACAAGGAACAAACTCGGCACAGAGTTTAGAGTGACAGGTCTAGCACACCCTCTGACCTTGTCACCTAATCACTCATCCGCAAGGTGCGACTGGGTACTGACAGCCTCTGTACAAGGGGTTGTCAGTTCCCAGTCAACCAGCTGTATGGCAGAGAAACTGTCTGTGGAAAAAGTTTTCTTTGGGGTAGAAAAAAGTTTTCTTTGGGGTATAATGTATGTCCTAAAAAGCTTGCCTTTCATTTACTccttgttttacattttttacattctgTCTAGAGAAGTGTTATTTTTATCGTTACCATAGTGATAGAACACTTTGTTTTATCTCTTTGCTCTTTACCTTCAATACCTTGTGACATGTTGCCTTAATTACCTGTGAGCTGTGCATCCTGTCCCCACCCACACTGTGTCGATGATGTAGTCTGTATGTGTACAGTAGTGAAACACACGTTTCCATTACACTGCTAATCATGAGTTCCTGGGTTGGGGGTATAGATGTTCTTATCCTTGTTCTGTGAAACCAAAAACTAATGTATGTGAGATTTTAAGCACcttattaaaaatacattttgaaatatata
>XM_036959215.1
GGAACACTTGGGGCCCAATTCAGAACTCTGCCATTCACGCGTATGATTTCGCCAAATCTGACATCGCGGTGCTGGTTCTGTGGGGACCAGTTGGATTCACTCCTTGGCTGCTATTTATGTGGCTGATGGACAAGAAAGGGTTGTGTCATTGCATGCTGCAGCGACTTGGGAATTGTTGACGTATACATCATGGGGAAAAAAGGAGAAGGTCTGCGGGCGTCTCTTTTACTGTCAGTCTTCTTCATGGTGATGGGGGCAGCGCTGCGTAGTGTCCCTGTACCAGACCTACAACTAAGGCGATGgttAATACACGGTGGTCAGCTGTTGAATGGTTTGGCCGGACCAACAATAATGAGCGCTGgacccctcctctccaccacatGGTTCGCGCCAGACCAGAGAGCCACAGCCACCGCTGTCGCCTCATTGGTCAGCTATCTGGGGGCGGCGTGCTCCTTCATTGTCGGCCCGCTGCTTGTGCCCGCCCCTAACGACACCACCCGTGTCATGGTGGCCCGAGCTGTTGTCTCGACAGACACCCAGATCAATCACATACGAGACAGGATTCAGCTGGTTTTGTATGCAGAGCttggtgtggtggtggtgctgtttgCTGCGGTGCTGTTCTACTTCCCCTCCCGGCCCCCCAGACCCCCCAGTGTAGCCGCTGCCAGCCAGAGACTCCGCTACAGCAGCAGCATCTGCAGACTACTCAGTAATTTCCGGTTCCTGATGATAGCGTTGGCCTACGCGGTGCCTACAGGAGTGGTGGCAGGCTGGTCAGGAGTTCTGGACATGATCCTCACCCCTGCCAGAGtcagccaggtggATGCTGGCTGGATTGGGTTCTGGTCTGTCGTGGGCGGCTGTGTATTTGGAGTGGCCATGGCCAGgtTTGCAGACTCTATCCGGGGCATGCTGAAGCTCATCCTGGTCCTGATGATGGCTGGGGCTTCCCTGGCCTCCACCTGGTTCACACTCACTTGTCTAACCAGGCTCACACACCTACCCTCCACTGCAGccacCCTGTACACCTCCTGTATCGTATTGGGCATCTTCATCAACAGTAGTGTGCCCATCTTCTTTGAGCTCTTAATCGAGACCGTGTACCCCGTGCCCGAGGGCATCACCTGCGGGGTGGTCACCTTCCTCGGTAACCTGGTCACCGGctgcctcctcttcttcctcacctTCTACACCACAGATTTGTCGTGGCTGAACTGGTGTCTGACGGGCTCCTGTGCCTTCAGCCTGgtcctcatcctcttcttcagGGAATCCTACGACCGCCTCTACCTCGACGTCTTCGTCTCAGTCTGACAGACAACAAACAAACTGACCCAGGAGGAAAACAAAGACTGGAACAGTGTTAAACACATTGCACAAAGAAGAGGAGAAAAATAAGCCCCCTTTTTGACCTTATAATAATTAGAACTAACTGTAGTTGTAAATGTGTTATATGACGGTGGTCGTTGAGGCATTGTGATTTCCATGTAGCCAATGAGAAGAGCTGAAGAGCCGAGGGCCTCAGACAGTTAGTCATTCATGTTTAACTGTAAGGGACTGTTTGTCCTGCTGGCCTGGTCCTCAGATACAGCATCGTCTTTTTCTTTTTCGTAGTGTAAAGTTCAAATTACAGTTGAACCGTTGTTTTTTTAACCCGGTCATGGCATGATGAGGGACTGTTGTTGTTTACAGAAGTAATGTCTAAAGAGGCACTCTGTGGCAGGTGACCTGTGACCTGGCTGTTCTCTGGTTTTAATCAGGAAGGAGAGGCATGATTGGCTGAGGAGCTCTAGCAGCCAATCAACAGGCCCAACCGTGCCCGTCTATTCTAACAAGGGACCGCATAGCGTTTTAGTGTCACTCATAACTGCTGGTTATGAATGGCAGGGGGGAAACTGTCAAACTGAGCTGTTCTGCAAATGACCTGTGTACCTGTCGTTGAATAGTGACATATGAGCTCCCttttttaacccccccccccctctctctcaaggAATATTATGCAAGACTGATAATGACAAACCGTTCCTCCCCTcctgcatttatatatttttaaaatctcCCTATTGAATTGATTGGTCCCTGCCAGTGTCGTGGGCCGTGATTGAATGAGCCCCATTGAGTGTCTCTCTCAGCATGCAAAGTCAgaactctctctgtgtatttcgaGGCTCTGCTGTGCATTAGCAGTTGATAATGAGGAAGTAGGAAGTAGCAGTTTCCCCATTGTGATCTTTCAGCTTTGTTAAAGAAACTGACTACAGGAGTTTTGTTTCCGAGTTGGTTATGATGTAGACATTTTAGAAGATGTTCTCAAATGTTATTTTCTTAGTTTTTAGTTTGTTTTAATATGTGGGAGATTTTTTCCAATTTCAACTTGACAATGCATTCTTTTTTTTCTATATTCCTCAGTAGACATGTCTGTTATTATTCCAGATATTTATGCATTGAGGGATCAGAACACTAACACAGTTGATAACAGTAACAGACAAATACAAGAGACGCTATAATGAAATATGGGAATACTGCTTTCTGTTGCCCAGCTGAGAAGTGGCTGATTCTGTATGGAAATGTGGTAATGGAGCCACATAACATAACCAGGAAGCTGGTCTACATGTAATGCACAACGTTCACCAGCAGGGAGCGCTGTGCTGGGGACACTGATAAAATAGGGAGTGGTTCTGTTAGCAGCTCTTTCCCTGGCATGCATGGAGTTGGTGGTGATGCTTCCCACCAAATACAAAACAGACGCGTAACAGACGCTCAGAAAAGTGACATCCACAGAAAAGACAGGAACAACAAGGAACAAACTCGGCACAGAGTTTAGAGTGACAGGTCTAGCACACCCTCTGACCTTGTCACCTAATCACTCATCCGCAAGGTGCGACTGGGTACTGACAGCCTCTGTACAAGGGGTTGTCAGTTCCCAGTCAACCAGCTGTATGGCAGAGAAACTGTCTGTGGAAAAAGTTTTCTTTGGGGTAGAAAAAAGTTTTCTTTGGGGTATAATGTATGTCCTAAAAAGCTTGCCTTTCATTTACTccttgttttacattttttacattctgTCTAGAGAAGTGTTATTTTTATCGTTACCATAGTGATAGAACACTTTGTTTTATCTCTTTGCTCTTTACCTTCAATACCTTGTGACATGTTGCCTTAATTACCTGTGAGCTGTGCATCCTGTCCCCACCCACACTGTGTCGATGATGTAGTCTGTATGTGTACAGTAGTGAAACACACGTTTCCATTACACTGCTAATCATGAGTTCCTGGGTTGGGGGTATAGATGTTCTTATCCTTGTTCTGTGAAACCAAAAACTAATGTATGTGAGATTTTAAGCACcttattaaaaatacattttgaaatatata
>TU2065389
CTTGAATTGTTGCAGCGACATGGGTTGTTATTGTTTCTCTGGGCAACTGATATTGAAGTTAGATACATTTGTTGCCATTGTGTAATCGAATATTGGACATCGCGCGCGGATTAAGTCACTGCTGAACGAACGCTACGTTGTATGAAATGCGATGGGTGCTGCATCGAGCACCGAGGGCGAAAGGGAACCACTTATCTTTCCTCCTAACCCCGAGACGAGCATTCAGCCAGTTTACAGCCGAGTCTACGGGAGAAGATGGCTGGTTCTGACTCTATTTTCTTTGCTGGCGTTCATGCAAGGGATGGTATGGAACACTTGGGGCCCAATTCAGAACTCTGCCATTCACGCGTATGATTTCGCCAAATCTGACATCGCGGTGCTGGTTCTGTGGGGACCAGTTGGATTCACTCCTTGGCTGCTATTTATGTGGCTGATGGACAAGAAAGGTCTGCGGGCGTCTCTTTTACTGTCAGTCTTCTTCATGGTGATGGGGGCAGCGCTGCGTAGTGTCCCTGTACCAGACCTACAACTAAGGCGATGGTAACACCCCCTCTCACCCAGAGCTTTACTGTATACTCTCTTTATAAAACGGCTTGTTTGGAAGCTAGCAATACTTTCCCATACAAAATCATGCCCCATATAGGGCTGTGGTGCTCATTACATTTTGTCTGCCGGTTATTGTCATCTGAAAGACATTGTATAGTAACTCTACCTGTGTTTCTGTCTGAAAGTTGGTTATGTCGCCTTTCATATTTTTGTAATGAACATATGAATTATGCTGAGACAAAAAATAATAACCTTCTCACcataattgaccgttaattaacataaacatgtttagcatctccaggccaataaatcaatttaatgtacaccatcacaataaataaaTTTCatgtacaccgtcacaataaatacatttaatgtacaccgtcacaataaatacatttcatgtacaccgtcacaataaatacatttcatgtacaccgtcacaataaatccatgatttattttaggcagtttctaaagaaacattatgatataAAGAAAAATGGATTTCAGATAAGCAATATATACGTTGGCCTATTTTATGGTATCTGGCTATGTGCCATGCCATAGGCTCTAGGCTTGCTTTAGCATACAATGCcattatattataaactgggtggttggaATACTgatggctgaaagccatggtatatttaGTAATTTTTTATTTGGATCCCAATTAGCTAACACCGTAACTCTTGCTAATCTTTCTGGGGTCCAACATCAATTAACAAGACATTACAAACAACCACAAATCAAGACTTCACAAACATTCAACAAGTAGACAATACAGACAATTTAAAATACCTGACAGGAAATACATTTAACATTCAGTTGATGCTTcatatttcctgtccagtcatagggtcacattagatgttcttttaTTATTTCCTTGAAGGTGGATTTACTTTTtgcctgagaaatatggattggtaaagagttccattcagctatggTTCTATATAAAACTGTAGATTTAAGGCTATTTGTTCTTGGCTTGGGTTGTTTTAGCTGCCCTGAATTTGCCTTTCT

Function

symbol description
dirc2 MFS transporter, FLVCR family, disrupted in renal carcinoma protein 2

NR:

description
unnamed protein product

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579640.2 False 3603 mRNA 0.48 9 36435019 36520762
XM_036959215.1 False 3384 mRNA 0.48 10 36435308 36520762
TU2065389 True 1584 TUCP 0.40 3 36435000 36443077

Neighbor

gene id symbol gene type direction distance location
LOC110501803 LOC106582352 coding upstream 28800 36379506 ~ 36406219 (+)
LOC110502098 LOC106586421 coding upstream 58183 36362102 ~ 36376836 (+)
LOC110501802 LOC106582356 coding upstream 75257 36353670 ~ 36359762 (+)
LOC118943606 NA coding upstream 89569 36339754 ~ 36345450 (+)
LOC110501801 tsn coding upstream 187185 36243155 ~ 36247834 (+)
LOC110501807 pdia5 coding downstream 317952 36838714 ~ 36917226 (+)
LOC110501808 sec22a coding downstream 428697 36949459 ~ 36970391 (+)
LOC110501811 LOC106586394 coding downstream 600173 37120935 ~ 37146250 (+)
LOC110501812 LOC106582346 coding downstream 632806 37153568 ~ 37221890 (+)
LOC110501814 LOC106582344 coding downstream 701899 37222661 ~ 37238631 (+)
G1805209 hspbap1 non-coding upstream 9364 36415300 ~ 36425655 (+)
G1805198 NA non-coding upstream 59224 36375586 ~ 36375795 (+)
G1805158 NA non-coding upstream 96799 36313205 ~ 36338220 (+)
G1805152 NA non-coding upstream 126642 36307550 ~ 36308377 (+)
G1805289 NA non-coding downstream 31937 36552699 ~ 36555929 (+)
G1805295 NA non-coding downstream 43268 36564030 ~ 36564930 (+)
G1805312 sema5b non-coding downstream 68121 36588883 ~ 36630226 (+)
G1805352 NA non-coding downstream 121781 36642543 ~ 36642910 (+)
G1805400 NA non-coding downstream 191457 36712219 ~ 36719664 (+)
G1805191 NA other upstream 71089 36363596 ~ 36363930 (+)
G1804873 NA other upstream 559567 35874562 ~ 35875452 (+)
LOC110501795 LOC106596205 other upstream 675593 35740427 ~ 35760519 (+)
G1800754 NA other upstream 3520837 32910793 ~ 32914182 (+)
LOC110501767 LOC106582273 other upstream 4060838 32317123 ~ 32374208 (+)
LOC110501842 LOC106586352 other downstream 1559104 38079807 ~ 38213191 (+)
G1807306 NA other downstream 1778365 38282124 ~ 38316253 (+)
G1807376 NA other downstream 1885375 38406137 ~ 38411163 (+)
G1807566 NA other downstream 2341978 38862740 ~ 38863136 (+)
G1808209 NA other downstream 2628318 39149080 ~ 39151333 (+)
G1805231 NA non-coding downstream 7984 36451061 ~ 36451452 (+)
G1805234 NA non-coding downstream 14716 36457793 ~ 36458456 (+)
G1805246 NA non-coding downstream 31582 36474659 ~ 36474979 (+)
G1805267 NA non-coding downstream 63050 36506127 ~ 36509551 (+)
G1805222 NA non-coding downstream 67791 36510868 ~ 36512002 (+)

Expression


Co-expression Network