XLOC_036987


Basic Information

Item Value
gene id XLOC_036987
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 10936773 ~ 10938469 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072807
ACTCGGCACTCTCTCTCACACTGCCGATCACAACACACAATacatgacaggactagtgtctggactggACCACTAAagcaagaattaacaagaccagagtggcagaatccTAAACACGGCTGGGTCAAGGGCTGTGGGTGTCAGGCTGAATTAATAGGGAATGTGGAGGAGAGTGACGCTGAGGTGATCTCTGTGATGACGACGCCTTATTGCTTTCCATGAACACTGCGGCTTCATGCATATTTATGAGTGGAAATATCGGTTTAACAACAGCCCTGTCTGCACACACCTTATTCCAGGACTAATGCTTGTTTCTGTGCGCCGCCAGTATCCTGACAATGAGCTTTATACCCTTTCTATTAACTCTAAATGAAAGCTGGGAGAAATGGCGTTGGCTTTGTGACCCAGCCacagcaaaagcaaaaaaaaaaatgaaataaaaactcaACACAATAATACCTGTTTGTATAAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072807 True 472 lncRNA 0.44 2 10936773 10938469

Neighbor

gene id symbol gene type direction distance location
XLOC_036986 gmppaa coding upstream 156113 10770880 ~ 10780660 (+)
XLOC_036985 NA coding upstream 176660 10737086 ~ 10760113 (+)
XLOC_036984 dars1 coding upstream 177260 10699038 ~ 10759513 (+)
XLOC_036983 cxcr4b coding upstream 241843 10692905 ~ 10694930 (+)
XLOC_036982 NA coding upstream 371827 10562638 ~ 10564946 (+)
XLOC_036988 asic4a coding downstream 95845 11034314 ~ 11229565 (+)
XLOC_036989 wnt6b coding downstream 343500 11281969 ~ 11341315 (+)
XLOC_036990 wnt10a coding downstream 441313 11379782 ~ 11409691 (+)
XLOC_036991 CR847976.1 coding downstream 509308 11447777 ~ 11447909 (+)
XLOC_036992 cdk5r2b coding downstream 593556 11532025 ~ 11534622 (+)
XLOC_036980 BX936345.1 non-coding upstream 592793 10343864 ~ 10343980 (+)
XLOC_036979 NA non-coding upstream 779226 10155978 ~ 10157547 (+)
XLOC_036976 NA non-coding upstream 1039816 9893106 ~ 9896957 (+)
XLOC_036995 NA non-coding downstream 1523150 12461619 ~ 12469043 (+)
XLOC_036996 CR752651.1 non-coding downstream 1889536 12828005 ~ 12828120 (+)
XLOC_037004 CR407547.1 non-coding downstream 2510060 13448529 ~ 13448648 (+)
XLOC_037005 NA non-coding downstream 2530605 13469074 ~ 13471527 (+)

Expression


Co-expression Network