LOC110501825 (LOC106582330)


Basic Information

Item Value
gene id LOC110501825
gene name LOC106582330
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 37794009 ~ 37794948 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579664.2
CAGGTATAAAAGTAAGTGTTAAAACAGGCAGGACACCAGTGAAGCAGCAGCACAGCTCAAAGAAACAACCGCAACCATGATGGGCAAGATCATCTTCTACGAGGACAAGAACTTCCAGGGTCGATCCTATGAGACCAGCCAGGACTGTCCCGACATGTCCTCCTACCTGAGCAGGTGCCACTCCTGCAGGGTGGAGAGCGGCAACTTCATGGTGTACGATCGCCCCAACTTCATGGGAAACCAGTACTTCATGAAGAGGGGAGAGTACTCTGACTACCAGAGTATGATGGGAATGAATGACTGCATCAGGTCCAGCCGCATGATCCCCATGCACCGAGGGAACTTCAGGATGAGGATCTATGAGAGGGAGAACTTCGGAGGTCAGATGCACGAGATGATGGACGACTGTGACTCCATCCAGGAGCGTTACCGTATGTCAGACTGCCAGTCCTGCAACGTGATGGACGGCCACTGGCTGATGTACGAGCAGCCCCACTACAGAGGCAGGCAGATGTACTTGAGGCCTGGAGAGTACAGGAGCTTCAGGGATATGGGTATGAGTGGAATGAGGTTCATGAGCATGAGGCGTATCATGGACAACATGTCTATGTAAATTCCTCAAATGTATGAAAATtgttgattaaatagttttcaaATTCTATAACTGCTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579664.2 True 672 mRNA 0.50 3 37794009 37794948

Neighbor

gene id symbol gene type direction distance location
LOC110501823 LOC106582327 coding upstream 3593 37789357 ~ 37790416 (+)
LOC110501820 LOC106582329 coding upstream 10369 37764729 ~ 37783640 (+)
LOC110501815 LOC100194727 coding upstream 436557 37254802 ~ 37357452 (+)
LOC110501814 LOC106582344 coding upstream 555378 37222661 ~ 37238631 (+)
LOC110501812 LOC106582346 coding upstream 572119 37153568 ~ 37221890 (+)
LOC110501824 LOC106582328 coding downstream 8835 37803783 ~ 37804836 (+)
LOC110501828 LOC106582323 coding downstream 9160 37804108 ~ 37811761 (+)
LOC110501830 LOC106582325 coding downstream 20182 37815130 ~ 37817697 (+)
LOC110501829 LOC106582324 coding downstream 26940 37821888 ~ 37822751 (+)
LOC110502126 LOC106582321 coding downstream 29743 37824691 ~ 37827045 (+)
G1806785 NA non-coding upstream 141818 37645788 ~ 37652191 (+)
G1806716 LOC106581475 non-coding upstream 254369 37539406 ~ 37539640 (+)
G1805813 NA non-coding upstream 268876 37524919 ~ 37525133 (+)
G1805796 NA non-coding upstream 297714 37495716 ~ 37496295 (+)
G1805725 NA non-coding upstream 364376 37379675 ~ 37429633 (+)
G1806881 NA non-coding downstream 53079 37848027 ~ 37848640 (+)
G1806882 NA non-coding downstream 53837 37848785 ~ 37849012 (+)
G1806883 NA non-coding downstream 55330 37850278 ~ 37850545 (+)
G1807088 NA non-coding downstream 113882 37908830 ~ 37912450 (+)
G1807089 NA non-coding downstream 118061 37913009 ~ 37913740 (+)
LOC110501805 dirc2 other upstream 1350932 36435000 ~ 36520762 (+)
G1805191 NA other upstream 1430079 36363596 ~ 36363930 (+)
G1804873 NA other upstream 1918557 35874562 ~ 35875452 (+)
LOC110501795 LOC106596205 other upstream 2034583 35740427 ~ 35760519 (+)
G1800754 NA other upstream 4879827 32910793 ~ 32914182 (+)
LOC110501842 LOC106586352 other downstream 284918 38079807 ~ 38213191 (+)
G1807306 NA other downstream 504179 38282124 ~ 38316253 (+)
G1807376 NA other downstream 611189 38406137 ~ 38411163 (+)
G1807566 NA other downstream 1067792 38862740 ~ 38863136 (+)
G1808209 NA other downstream 1354132 39149080 ~ 39151333 (+)

Expression


Co-expression Network