XLOC_036993 (si:dkey-69o16.5)


Basic Information

Item Value
gene id XLOC_036993
gene name si:dkey-69o16.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 11587629 ~ 11595736 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072817
aaataataaaaaagtacataaataaaaaaataaaaacgattggGTAATGTTTAAAATTGGTCTTTGGAGTTGTAATCAATGACATTCATTTAGTTATCTGATGTTTCAAGTTTATTTTGGTGATGTTTGATCACATGACGATTCCAGTATAGGGTTTCTTATCATGTTGTCGCCTCTGTAAAGGACTGTCTTCTGTGCAATAAAAGCTCAGAGCGATATACTATCAGACCAAAGATCTGAGGAGAACGATGAAGAGGAAACTCCTGCTGGTGTCAAACTCCACTCTTCACGGAGGAGGATATCTACAGCACTGCCAGCAGAACATTCAAGACTTCTTTGGAAAggaGGTAAAGAGGGTCTTGTTTGTCCCGTATGCTCTGCATGATCGAGATGCTTATACCAAGACTGCCAGAGACAAGTTCAAGAGCCTGGGATATGAGCTGGACAGTGTCCACGAGTCACCCGACCCTGTTGATGCTGTCAGAAAAGCTGAAGGAATATTCATTGGTGGCGGTAACACATTTCGCCTGCTGAAAGCACTTTACGACAACAACCTGGTGACTGAGATAAAAAAGCGAGTTTTTCAGGATGGAATTCCTTACATGGGATCGAGTGCGGGAAGCAACGTCTCCACCGTCAGCATCAACACCACCAATGACATGCCCATCGTTTTTCCACCCTCGTTTAATGCCATTGGTTTAGTGCCCTTCAACATTAACCCGCACTATCTGGACACCGACCCCAACAGCAGACACATGGGGGAGACCCGTGAACAGAGAATCATCCAGTACCATGAGGAGCCAGACACGCCATCTGTTCTGGGTCTTCGGGAGGGCTCAATGTTGTTAGTGGAAGGAAACAAAGCCACTTTACTTGGCTGCACCAAAGCACGACTCTTCCAGAGAGGGAAACAAACCACAGAGTATGAACCGGGCAGTGACCTCAGCTTCCTACT
>TCONS_00072818
aaaaacgattggGTAATGTTTAAAATTGGTCTTTGGAGTTGTAATCAATGACATTCATTTAGTTATCTGATGTTTCAAGTTTATTTTGGTGATGTTTGATCACATGACGATTCCAGTATAGGGTTTCTTATCATGTTGTCGCCTCTGTAAAGGACTGTCTTCTGTGCAATAAAAGCTCAGAGCGATATACTATCAGACCAAAGGTAAAACACTGAAGATTACAGCCACACTGATCTGAGAACATGTGCTGTCAGCAGAAATAAGCGCTGGCCATTGTGTTTTCTGATCGACTTCTTCATTCCGGCAGCGCAGATCTGAGGAGAACGATGAAGAGGAAACTCCTGCTGGTGTCAAACTCCACTCTTCACGGAGGAGGATATCTACAGCACTGCCAGCAGAACATTCAAGACTTCTTTGGAAAggaGGTAAAGAGGGTCTTGTTTGTCCCGTATGCTCTGCATGATCGAGATGCTTATACCAAGACTGCCAGAGACAAGTTCAAGAGCCTGGGATATGAGCTGGACAGTGTCCACGAGTCACCCGACCCTGTTGATGCTGTCAGAAAAGCTGAAGGAATATTCATTGGTGGCGGTAACACATTTCGCCTGCTGAAAGCACTTTACGACAACAACCTGGTGACTGAGATAAAAAAGCGAGTTTTTCAGGATGGAATTCCTTACATGGGATCGAGTGCGGGAAGCAACGTCTCCACCGTCAGCATCAACACCACCAATGACATGCCCATCGTTTTTCCACCCTCGTTTAATGCCATTGGTTTAGTGCCCTTCAACATTAACCCGCACTATCTGGACACCGACCCCAACAGCAGACACATGGGGGAGACCCGTGAACAGAGAATCATCCAGTACCATGAGGAGCCAGACACGCCATCTGTTCTGGGTCTTCGGGAGGGCTCAATGTTGTTAGTGGAAGGAAACAAAGCCACTTTACTTGGCTGCACCAAAGCACGACTCTTCCAGAGAGGGAAACAAACCACAGAGTATGAACCGGGCAGTGACCTCAGCTTCCTACTGACAGATGCACAGTGAGCAGCTAATCATGTACAATGCAGCCATTTCTACAATAAAAAGTCAAATCTTCACTAAATTTGACATTTCTCGATTA

Function

symbol description
si:dkey-69o16.5 Predicted to enable serine-type peptidase activity. Predicted to act upstream of or within proteolysis.

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0008236 serine-type peptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-432 Predicted to enable serine-type peptidase activity. Predicted to act upstream of or within proteolysis.

Ensembl:

ensembl_id ENSDARG00000070057

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072817 False 955 mRNA 0.45 9 11587629 11595644
TCONS_00072818 True 1125 mRNA 0.45 8 11587660 11595736

Neighbor

gene id symbol gene type direction distance location
XLOC_036992 cdk5r2b coding upstream 53007 11532025 ~ 11534622 (+)
XLOC_036991 CR847976.1 coding upstream 139720 11447777 ~ 11447909 (+)
XLOC_036990 wnt10a coding upstream 177938 11379782 ~ 11409691 (+)
XLOC_036989 wnt6b coding upstream 246314 11281969 ~ 11341315 (+)
XLOC_036988 asic4a coding upstream 358064 11034314 ~ 11229565 (+)
XLOC_036994 tmem41aa coding downstream 848758 12444494 ~ 12455521 (+)
XLOC_036995 NA coding downstream 865883 12461619 ~ 12469043 (+)
XLOC_036996 CR752651.1 coding downstream 1232269 12828005 ~ 12828120 (+)
XLOC_036997 glb1l coding downstream 1251304 12847040 ~ 12869049 (+)
XLOC_036998 hce2l2 coding downstream 1291755 12887491 ~ 12894091 (+)
XLOC_036987 NA non-coding upstream 649160 10936773 ~ 10938469 (+)
XLOC_036985 NA non-coding upstream 827516 10737086 ~ 10760113 (+)
XLOC_036982 NA non-coding upstream 1022683 10562638 ~ 10564946 (+)
XLOC_036980 BX936345.1 non-coding upstream 1243649 10343864 ~ 10343980 (+)
XLOC_037004 CR407547.1 non-coding downstream 1852793 13448529 ~ 13448648 (+)
XLOC_037005 NA non-coding downstream 1873338 13469074 ~ 13471527 (+)
XLOC_037014 NA non-coding downstream 2516739 14112475 ~ 14117000 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000036_01424028_01426480 PEPE coding CI01000036 null 1424028 ~ 1426515 (+)