nmi (LOC106582386)


Basic Information

Item Value
gene id nmi
gene name LOC106582386
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 40494866 ~ 40500658 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036959323.1
CTCTGCAGCAACTTTCACTTTTGATTTCGACCCCACGTGACTTCGAGGAACTCAGAGTAGGTTACAAAAGATAATCAATTCGTCGTGATATTTGACTGTAGGAAACAGTATCAGTCCGTATTTTCTCAGGCCGATTCGACTTTTACGCAGATAATGAGTGACTCTGACGCCGTCAAGCCGCTTGTGAATGGAAAGATGGATAACATCGATGATGAAGAACAGAAACTGTCTGTAGCCAAGGAAGAGCTGAATACATTGACGAAACAACTTGAGAAGGCAGAGGACGAAAAATCTAGGCTGCAGTTGGCAAAACTGAGCGCAGAAGATTCAAAGAAAGAGGCTTCAAAAAATGTGATGGTCCTTCAACGACAGGGGGAGCAACGTCAGGAGGAGTTCTCTAAAACTGTGAAAGGGATACAGAATGATATCTCGATGCTTGAGAAGGGTAACAAAGATCTGATGGAGAAACTGAAGAAAAGCCAGGCTAAGCTACGGGCTAAGAAGACAGAGTCTGCTACACTTCAGCAGAGGTTTAAGATCTATGTCCAGATCCCTGAAAAGAAGGTGAAGTTTACCCGTAAGGAGGAGGACAGCGATGACAGCGGTCAACACATCAAGGGGGTGTTCACCATTGCCCAGAGACCATCAGTGCTCCTGAAGGGGGGGCAGGCTCTCATCACTTTTGAGGAGGAGAAAGtggcTGCCCAGATCCTGAAGATGGCCAAGTGTACTGTGTCCTGTGATAAAGACAAGGTGCATGTGAAGCCCAAAAGCCTCACACTGGACCCCTTTGTAAAGTTTGAGGTACACCTTGATGTCTCCACAAAGACACTCAGCTTCTCCAATGTCCCGTTCACCCTGTCAGAGGAACGAATGAGAGACCGTCTGGAGATCAGCTTCTCCAAGCCCAGtcgagggggaggagaggtgcaGAGGGTGGACTATGACAAGCACACTGGGAGAGGACAAATCACCTTCCTCAACTCTGGAGTTGCAGAGAGGCTGGCCCTGAAAAGGAAGTACATCGTGGATATGGACCGTGAGGTGAATGTGAAAGTTGACCTTGTTTACAACTACAAGCTGAAGAAGTTTCAGACGTTCTGCGGCACTCCGACGCGCACCATCCTCCTGTGCGGGATTGCAGACTTCCAGGATGAGGAGGACCTGCAGGATCACCTGGAGATTCACTTCCAGAAGCCCAGTAACTATGGAGGGGAGGTGGAGTGCATCAAGTATGTCTCCGGGGGCAACGAGGTCAAGGCCTTCTTCACTGAGGACATGGCTGAGAGTGAGGCTTAACATTAACAAACGGCCATCCTCTTACGATACATCTATGCTCATGTTTCTCAGTACTTAGTTGGTACCACATGAAGGAACCTTAGCGATGATGTATTCATCCGCATTTACCATAATCTATACCCCACTGACATGCAGCACTATATTATACCAAAACTGATCTGTAAGTCTTGGGAAATTAGTCATGTCATCTTTGTATACTGACTAAGTTTAACAAGGCCTTAAAACGTGCATGATAATGCCTTGTGCAGAGCCTTAAGTTTAGAATAATATTGATTAGAAGGATCTTTATAGTTATATAGTCAAACTCTATTAGAAGGGGACAAATGAAAATGCACAGTAGTTGTTTTCATCTAGAGATACTATGTCTATTTCTCCGTGTCGGGCATCTTTGTGATATGATTAAAGGTGTTTTTTGCTCAAAACTTCAAATCATGGGTTTTTAAATCGGTGATCATGACATGAATCATGAATTTACTGTATGGATAATCCCATTGATCGTGGTATATGAGTAACCCACCTACTTAATTTCACCCCATAAAATGCATTTAATGCATATCACATTGTT
>XM_036959322.1
CTGCAGCAACTTTCACTTTTGATTTCGACCCCACGTGACTTCGAGGAACTCAGAGTAGGTTACAAAAGATAATCAATTCGTCGTGATATTTGACTGTAGGAAACAGTATCAGTCCGTATTTTCTCAGGCCGATTCGATAATGAGTGACTCTGACGCCGTCAAGCCGCTTGTGAATGGAAAGATGGATAACATCGATGATGAAGAACAGAAACTGTCTGTAGCCAAGGAAGAGCTGAATACATTGACGAAACAACTTGAGAAGGCAGAGGACGAAAAATCTAGGCTGCAGTTGGCAAAACTGAGCGCAGAAGATTCAAAGAAAGAGGCTTCAAAAAATGTGATGGTCCTTCAACGACAGGGGGAGCAACGTCAGGAGGAGTTCTCTAAAACTGTGAAAGGGATACAGAATGATATCTCGATGCTTGAGAAGGGTAACAAAGATCTGATGGAGAAACTGAAGAAAAGCCAGGCTAAGCTACGGGCTAAGAAGACAGAGTCTGCTACACTTCAGCAGAGGTTTAAGATCTATGTCCAGATCCCTGAAAAGAAGGTGAAGTTTACCCGTAAGGAGGAGGACAGCGATGACAGCGGTCAACACATCAAGGGGGTGTTCACCATTGCCCAGAGACCATCAGTGCTCCTGAAGGGGGGGCAGGCTCTCATCACTTTTGAGGAGGAGAAAGtggcTGCCCAGATCCTGAAGATGGCCAAGTGTACTGTGTCCTGTGATAAAGACAAGGTGCATGTGAAGCCCAAAAGCCTCACACTGGACCCCTTTGTAAAGTTTGAGGTACACCTTGATGTCTCCACAAAGACACTCAGCTTCTCCAATGTCCCGTTCACCCTGTCAGAGGAACGAATGAGAGACCGTCTGGAGATCAGCTTCTCCAAGCCCAGtcgagggggaggagaggtgcaGAGGGTGGACTATGACAAGCACACTGGGAGAGGACAAATCACCTTCCTCAACTCTGGAGTTGCAGAGAGGCTGGCCCTGAAAAGGAAGTACATCGTGGATATGGACCGTGAGGTGAATGTGAAAGTTGACCTTGTTTACAACTACAAGCTGAAGAAGTTTCAGACGTTCTGCGGCACTCCGACGCGCACCATCCTCCTGTGCGGGATTGCAGACTTCCAGGATGAGGAGGACCTGCAGGATCACCTGGAGATTCACTTCCAGAAGCCCAGTAACTATGGAGGGGAGGTGGAGTGCATCAAGTATGTCTCCGGGGGCAACGAGGTCAAGGCCTTCTTCACTGAGGACATGGCTGAGAGTGAGGCTTAACATTAACAAACGGCCATCCTCTTACGATACATCTATGCTCATGTTTCTCAGTACTTAGTTGGTACCACATGAAGGAACCTTAGCGATGATGTATTCATCCGCATTTACCATAATCTATACCCCACTGACATGCAGCACTATATTATACCAAAACTGATCTGTAAGTCTTGGGAAATTAGTCATGTCATCTTTGTATACTGACTAAGTTTAACAAGGCCTTAAAACGTGCATGATAATGCCTTGTGCAGAGCCTTAAGTTTAGAATAATATTGATTAGAAGGATCTTTATAGTTATATAGTCAAACTCTATTAGAAGGGGACAAATGAAAATGCACAGTAGTTGTTTTCATCTAGAGATACTATGTCTATTTCTCCGTGTCGGGCATCTTTGTGATATGATTAAAGGTGTTTTTTGCTCAAAACTTCAAATCATGGGTTTTTAAATCGGTGATCATGACATGAATCATGAATTTACTGTATGGATAATCCCATTGATCGTGGTATATGAGTAACCCACCTACTTAATTTCACCCCATAAAATGCATTTAATGCATATCACATTGTT
>XM_036959324.1
CTGCAGCAACTTTCACTTTTGATTTCGACCCCACGTGACTTCGAGGAACTCAGAGTAGGTTACAAAAGATAATCAATTCGTCGTGATATTTGACTGTAGGAAACAGTATCAGTCCGTATTTTCTCAGGCCGATTCGATAATGAGTGACTCTGACGCCGTCAAGCCGCTTGTGAATGGAAAGATGGATAACATCGATGATGAAGAACAGAAACTGTCTGTAGCCAAGGAAGAGCTGAATACATTGACGAAACAACTTGAGAAGGCAGAGGACGAAAAATCTAGGCTGCAGTTGGCAAAACTGAGCGCAGAAGATTCAAAGAAAGAGGCTTCAAAAAATGTGATGGTCCTTCAACGACAGGGGGAGCAACGTCAGGAGGAGTTCTCTAAAACTGTGAAAGGGATACAGAATGATATCTCGATGCTTGAGAAGGGTAACAAAGATCTGATGGAGAAACTGAAGAAAAGCCAGGCTAAGCTACGGGCTAAGAAGACAGAGTCTGCTACACTTCAGCAGAGGTTTAAGATCTATGTCCAGATCCCTGAAAAGAAGGTGAAGTTTACCCGTAAGGAGGAGGACAGCGATGACAGCGGTCAACACATCAAGGGGGTGTTCACCATTGCCCAGAGACCATCAGTGCTCCTGAAGGGGGGGCAGGCTCTCATCACTTTTGAGGAGGAGAAAGtggcTGCCCAGATCCTGAAGATGGCCAAGTGTACTGTGTCCTGTGATAAAGACAAGGTACACCTTGATGTCTCCACAAAGACACTCAGCTTCTCCAATGTCCCGTTCACCCTGTCAGAGGAACGAATGAGAGACCGTCTGGAGATCAGCTTCTCCAAGCCCAGtcgagggggaggagaggtgcaGAGGGTGGACTATGACAAGCACACTGGGAGAGGACAAATCACCTTCCTCAACTCTGGAGTTGCAGAGAGGCTGGCCCTGAAAAGGAAGTACATCGTGGATATGGACCGTGAGGTGAATGTGAAAGTTGACCTTGTTTACAACTACAAGCTGAAGAAGTTTCAGACGTTCTGCGGCACTCCGACGCGCACCATCCTCCTGTGCGGGATTGCAGACTTCCAGGATGAGGAGGACCTGCAGGATCACCTGGAGATTCACTTCCAGAAGCCCAGTAACTATGGAGGGGAGGTGGAGTGCATCAAGTATGTCTCCGGGGGCAACGAGGTCAAGGCCTTCTTCACTGAGGACATGGCTGAGAGTGAGGCTTAACATTAACAAACGGCCATCCTCTTACGATACATCTATGCTCATGTTTCTCAGTACTTAGTTGGTACCACATGAAGGAACCTTAGCGATGATGTATTCATCCGCATTTACCATAATCTATACCCCACTGACATGCAGCACTATATTATACCAAAACTGATCTGTAAGTCTTGGGAAATTAGTCATGTCATCTTTGTATACTGACTAAGTTTAACAAGGCCTTAAAACGTGCATGATAATGCCTTGTGCAGAGCCTTAAGTTTAGAATAATATTGATTAGAAGGATCTTTATAGTTATATAGTCAAACTCTATTAGAAGGGGACAAATGAAAATGCACAGTAGTTGTTTTCATCTAGAGATACTATGTCTATTTCTCCGTGTCGGGCATCTTTGTGATATGATTAAAGGTGTTTTTTGCTCAAAACTTCAAATCATGGGTTTTTAAATCGGTGATCATGACATGAATCATGAATTTACTGTATGGATAATCCCATTGATCGTGGTATATGAGTAACCCACCTACTTAATTTCACCCCATAAAATGCATTTAATGCATATCACATTGTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036959323.1 False 1864 mRNA 0.45 10 40494866 40500658
XM_036959322.1 False 1850 mRNA 0.45 10 40494868 40500658
XM_036959324.1 True 1799 mRNA 0.45 10 40494868 40500658

Neighbor

gene id symbol gene type direction distance location
ubxn4 ubxn4 coding upstream 45388 40439164 ~ 40449478 (+)
LOC110501870 r3hdm1 coding upstream 76619 40357947 ~ 40418247 (+)
LOC118943589 NA coding upstream 108655 40380233 ~ 40386211 (+)
LOC110502148 rab3gap1 coding upstream 231400 40216020 ~ 40263466 (+)
LOC110501869 ccnt2 coding upstream 294428 40190583 ~ 40200438 (+)
LOC110501874 LOC106582403 coding downstream 49415 40550073 ~ 40558749 (+)
LOC110501877 LOC106582405 coding downstream 245224 40745882 ~ 40758226 (+)
LOC110501885 LOC106582417 coding downstream 785828 41286486 ~ 41363126 (+)
LOC110502150 NA coding downstream 1026324 41526982 ~ 41528136 (+)
LOC110502132 clm8 coding downstream 1440539 41941197 ~ 41943225 (+)
G1809582 NA non-coding upstream 66405 40335541 ~ 40428461 (+)
G1809544 NA non-coding upstream 200109 40294484 ~ 40294757 (+)
G1809516 NA non-coding upstream 215497 40279000 ~ 40279369 (+)
G1809514 NA non-coding upstream 217014 40277302 ~ 40277852 (+)
G1809504 NA non-coding upstream 224301 40270190 ~ 40270565 (+)
G1809774 NA non-coding downstream 15896 40516554 ~ 40516781 (+)
G1809781 NA non-coding downstream 22521 40523179 ~ 40523423 (+)
G1809784 NA non-coding downstream 23649 40524307 ~ 40524652 (+)
G1809786 NA non-coding downstream 25107 40525765 ~ 40526163 (+)
G1809806 NA non-coding downstream 39519 40540177 ~ 40540403 (+)
G1809107 NA other upstream 569471 39924414 ~ 39925395 (+)
G1808787 NA other upstream 799998 39693913 ~ 39694868 (+)
G1808209 NA other upstream 1343533 39149080 ~ 39151333 (+)
G1807566 NA other upstream 1631730 38862740 ~ 38863136 (+)
G1807376 NA other upstream 2083703 38406137 ~ 38411163 (+)
G1810553 NA other downstream 689031 41189689 ~ 41192492 (+)
G1810740 NA other downstream 963820 41464478 ~ 41466349 (+)
LOC110501889 LOC106582433 other downstream 1755897 42256417 ~ 42389468 (+)
G1812428 NA other downstream 2223014 42723672 ~ 42724114 (+)
LOC110502157 LOC106582435 other downstream 2228943 42688215 ~ 42735867 (+)

Expression


Co-expression Network