Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110501905 |
| gene name | LOC106582444 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 43213840 ~ 43226393 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021579762.2 | False | 1946 | mRNA | 0.42 | 5 | 43213840 | 43226393 |
| XM_021579761.2 | True | 2027 | mRNA | 0.43 | 5 | 43216341 | 43226393 |
43,202,000
43,204,000
43,206,000
43,208,000
43,210,000
43,212,000
43,214,000
43,216,000
43,218,000
43,220,000
43,222,000
43,224,000
43,226,000
43,228,000
43,230,000
NC_048586.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501901 | LOC106582440 | coding | upstream | 175846 | 42884711 ~ 43039681 (+) |
| LOC110502157 | LOC106582435 | coding | upstream | 479278 | 42688215 ~ 42735867 (+) |
| LOC110502156 | ahr2a | coding | upstream | 528732 | 42615178 ~ 42685108 (+) |
| LOC110501894 | glpc | coding | upstream | 662870 | 42511973 ~ 42550970 (+) |
| LOC110501889 | LOC106582433 | coding | upstream | 824372 | 42256417 ~ 42389468 (+) |
| LOC110501904 | LOC106582430 | coding | downstream | 4031 | 43230424 ~ 43232133 (+) |
| LOC110501906 | LOC106582445 | coding | downstream | 120410 | 43346803 ~ 43486763 (+) |
| LOC110501907 | LOC106582447 | coding | downstream | 275400 | 43501793 ~ 43549935 (+) |
| LOC110501909 | LOC106582448 | coding | downstream | 324079 | 43550472 ~ 43572947 (+) |
| LOC118943639 | LOC106582449 | coding | downstream | 400048 | 43626441 ~ 43627892 (+) |
| G1813017 | NA | non-coding | upstream | 3077 | 43210127 ~ 43210763 (+) |
| G1813008 | NA | non-coding | upstream | 12539 | 43201047 ~ 43201301 (+) |
| G1812930 | NA | non-coding | upstream | 78287 | 43135337 ~ 43135553 (+) |
| G1812915 | NA | non-coding | upstream | 91606 | 43122006 ~ 43122234 (+) |
| G1812896 | NA | non-coding | upstream | 104725 | 43108800 ~ 43109115 (+) |
| G1813071 | NA | non-coding | downstream | 57880 | 43284273 ~ 43291106 (+) |
| G1813123 | NA | non-coding | downstream | 132041 | 43358434 ~ 43359555 (+) |
| G1813094 | NA | non-coding | downstream | 159568 | 43385961 ~ 43389375 (+) |
| G1813143 | NA | non-coding | downstream | 176290 | 43402683 ~ 43402885 (+) |
| G1813144 | NA | non-coding | downstream | 176547 | 43402940 ~ 43403259 (+) |
| G1812953 | NA | other | upstream | 63456 | 43149762 ~ 43150384 (+) |
| G1812428 | NA | other | upstream | 489726 | 42723672 ~ 42724114 (+) |
| G1810740 | NA | other | upstream | 1747491 | 41464478 ~ 41466349 (+) |
| G1813442 | NA | other | downstream | 881851 | 44108244 ~ 44110867 (+) |
| LOC110502169 | LOC106582455 | other | downstream | 1091765 | 44148629 ~ 44324651 (+) |
| G1813588 | ino80d | other | downstream | 1136268 | 44362661 ~ 44371923 (+) |
| G1813665 | LOC106582464 | other | downstream | 1272064 | 44498457 ~ 44508051 (+) |
| LOC110501918 | LOC106582467 | other | downstream | 1340495 | 44566863 ~ 44573921 (+) |
