XLOC_036998 (hce2l2)


Basic Information

Item Value
gene id XLOC_036998
gene name hce2l2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 12887491 ~ 12894091 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072825
TTATAAATCATACATCCTGGATCTTTATTTCATACGGATAATTATGGTAAATTACGTAAGTATTAGTTACCATTTGTTAACGTCTTTATTTACTCGCTCCACCTCATCATTAGTAAGCTGTAGTTCTGTTTTGGCGTCCTCAAGCTGTTTTGACAAATCCTGACAAGAAAAATGCACAAAACCTGAAGCAGCGTTCGTTCATTTTCGGCGGATAAATAAATACACGCGGTGGAAAGTTTTACCTGTATTTCTTTATCGTCCTGAAACGTGACGTTTAAAGAGTTTTGTGGGGTCTTCATTACTCCAAAGCACGTTTTCTCACACAACCCGATTTTACTTTTTGGTAACGATAAACAACTTTCGCTCGACTCAACGCGTGATTACTAATAAGTAATTTGATTGAGTAACATCTGATTGGATGATACATACTAATTAGACTCCGTTTATATCGAATTTTAATGTTCATCTGTTCAGTTAaaacttatataaatatattatttgtattattcaagactaacattaataaatcagtgaatcattaaaatGATAACGGAAAAACAACATGCAGAAACAATCGCATGAACATGAACTGACTGAAAAAATGGGGCACAGCTTCATCCGCACTATTGTGATTTCCGCCTGATGAGTAGAACGCaagagcccggatagctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcgatCAAGTTTTATGTGATCTTAGACTAAATTACAACACAGATCACACAAAGATAATAGTAGTTAAGTggttaaaactgaaaaaaattgtaACGCGAAGAAAAACAGACGTCTGGTTGGCCACTGAGGGTGCACATTATGTAACAGAGGAAGAGTACTTAAAAGGCAACCTGCCTGAAGATAGTAGACAGCAAGTCTCAGTGCACTCATGGAGTTCACACTGCTTATCGTCCTCTTTTTAGCAGGAACATGTTTGTCTTTGCCTTCTCAGGTTTCCCCGAATTTTGGAGCAAGAAGGCAAAGGAGCTACTCTGAAGATATTGAAGAGAATCAAACTGCAATGGATAGGATCATTGATGTGAATGACTACCAAGGTGTCTTTTCTGTGGACGGCACCAATCTCAGAGAAGGAGATATTGCTGTGTCTGGAAGGAGTCAGAAGAACTGTTTTGCCAGGAGCTGCCTGTGGACCAAATCTGTGGATGGAAATGTCTACATTGCCTACTCACTCTCTCATGCGTACGACGATGCAGACGTGAAGAACATTAAGGAAGGCATGGAGCTCATCGAACAGGACACTTGTGTGCGCTTCGTGCCCAGAACTCACCAGAGGGACTATCTGGATATTCAGCCCAAAACAGGGTGTTGGTCATATTTGGGGGCACGTGGTGGTAGACAAACCATTTCTCTACAATCGCCCGACTGCACCGGGTCTGGGGTCACTGTGCATGAGCTGATGCATGCTTTGGGCTTTGTGCATGAACAATCCAGAGCCGACCGGGACAAGTATGTGACCATCATGTGGTCTAATATATGGAAAGacAGGCTGAGGAATTTCGAaaagtttaaaacaaacaatttggACACCCCGTACGACTACAGCTCTGTGATGCACTTTGGAAAgTATGCCTTTTCTGAGGATGGAGAACCAACTATTGTGCCGAAAAGGAACTGGAATGTGAAGATTGGACAGAGATTGGGACCCAGCGACTTGGATATAATGAAGATTAATAAACTGTACAGCTGTAATATGCAGTAAAGTCCATACACAGCAACGAATGATCCATCAGAAGGATTTTATCTGAGATTAATGCTTATTTTAACACTTTGCTTGACATTAAATAGTTAATTTTGAGAttgctaatataataataattattaatcattttattttgtaaccAGCTGTTTCAGTTTATATATCCTTTCATGTTCAGATATTCTGACATCATGTCtcaaataaacacattacacCAATAAAACGTTTCCATactattatttttcattcattcatgtcaCTGTGAAATGTTT
>TCONS_00072826
GTGGACGGCACCAATCTCAGAGAAGGAGATATTGCTGTGTCTGGAAGGAGTCAGAAGAACTGTTTTGCCAGGAGCTGCCTGTGGACCAAATCTGTGGATGGAAATGTCTACATTGCCTACTCACTCTCTCATGCGTACGACGATGCAGACGTGAAGAACATTAAGGAAGGCATGGAGCTCATCGAACAGGACACTTGTGTGCGCTTCGTGCCCAGAACTCACCAGAGGGACTATCTGGATATTCAGCCCAAAACAGGGTGTTGGTCATATTTGGGGGCACGTGGTGGTAGACAAACCATTTCTCTACAATCGCCCGACTGCACCGGGTCTGGGGTCACTGTGCATGAGCTGATGCATGCTTTGGGCTTTGTGCATGAACAATCCAGAGCCGACCGGGACAAGTATGTGACCATCATGTGGTCTAATATATGGAAAGacAGGCTGAGGAATTTCGAaaagtttaaaacaaacaatttggACACCCCGTACGACTACAGCTCTGTGATGCACTTTGGAAAgTATGCCTTTTCTGAGGATGGAGAACCAACTATTGTGCCGAAAAGGAACTGGAATGTGAAGATTGGACAGAGATTGGGACCCAGCGACTTGGATATAATGAAGATTAATAAACTGTACAGCT

Function

symbol description
hce2l2 Predicted to enable metalloendopeptidase activity. Predicted to act upstream of or within proteolysis.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000070011

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072825 False 2037 mRNA 0.39 8 12887491 12894091
TCONS_00072826 True 640 mRNA 0.48 5 12890161 12893808

Neighbor

gene id symbol gene type direction distance location
XLOC_036997 glb1l coding upstream 18442 12847040 ~ 12869049 (+)
XLOC_036996 CR752651.1 coding upstream 59371 12828005 ~ 12828120 (+)
XLOC_036995 NA coding upstream 418448 12461619 ~ 12469043 (+)
XLOC_036994 tmem41aa coding upstream 431970 12444494 ~ 12455521 (+)
XLOC_036993 si:dkey-69o16.5 coding upstream 1291755 11587629 ~ 11595736 (+)
XLOC_036999 hce2l1 coding downstream 487 12894578 ~ 12903567 (+)
XLOC_037000 si:dkey-230p4.1 coding downstream 11500 12905591 ~ 12953824 (+)
XLOC_037001 bmpr2b coding downstream 65669 12959760 ~ 13111163 (+)
XLOC_037002 fam117bb coding downstream 226328 13120419 ~ 13212790 (+)
XLOC_037003 carf coding downstream 335494 13229585 ~ 13251327 (+)
XLOC_036991 CR847976.1 non-coding upstream 1439582 11447777 ~ 11447909 (+)
XLOC_036987 NA non-coding upstream 1949022 10936773 ~ 10938469 (+)
XLOC_036985 NA non-coding upstream 2127378 10737086 ~ 10760113 (+)
XLOC_037004 CR407547.1 non-coding downstream 554438 13448529 ~ 13448648 (+)
XLOC_037005 NA non-coding downstream 574983 13469074 ~ 13471527 (+)
XLOC_037014 NA non-coding downstream 1218384 14112475 ~ 14117000 (+)
XLOC_037015 AL929266.1 non-coding downstream 1248982 14143073 ~ 14147153 (+)
XLOC_037016 NA non-coding downstream 1258077 14152168 ~ 14197503 (+)

Expression


Co-expression Network