Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110502136 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 44634884 ~ 44636332 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002470302.2 | True | 580 | mRNA | 0.44 | 2 | 44634884 | 44636332 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501919 | LOC106582468 | coding | downstream | 2691 | 44598354 ~ 44632193 (-) |
| rbm45 | LOC106582466 | coding | downstream | 72409 | 44558131 ~ 44562475 (-) |
| LOC110502171 | LOC106582464 | coding | downstream | 81277 | 44473683 ~ 44553607 (-) |
| LOC110501914 | LOC106582459 | coding | downstream | 247183 | 44376582 ~ 44387701 (-) |
| LOC110501913 | LOC106582458 | coding | downstream | 265875 | 44355163 ~ 44369009 (-) |
| LOC110501923 | LOC106582471 | coding | upstream | 23237 | 44659569 ~ 44664863 (-) |
| LOC110501924 | hoxd3ab | coding | upstream | 281147 | 44917479 ~ 44939556 (-) |
| LOC110501925 | hoxd4ab | coding | upstream | 292204 | 44928536 ~ 44933201 (-) |
| LOC110501927 | hoxd9ab | coding | upstream | 306880 | 44943212 ~ 44945287 (-) |
| LOC110501926 | hoxd10ab | coding | upstream | 311330 | 44947662 ~ 44950370 (-) |
| G1814459 | NA | non-coding | downstream | 29543 | 44601932 ~ 44605341 (-) |
| G1814349 | NA | non-coding | downstream | 60966 | 44496573 ~ 44573918 (-) |
| G1814437 | NA | non-coding | downstream | 93264 | 44539248 ~ 44541620 (-) |
| G1814423 | NA | non-coding | downstream | 101189 | 44533430 ~ 44533695 (-) |
| G1814482 | NA | non-coding | upstream | 39972 | 44676304 ~ 44676524 (-) |
| G1814483 | NA | non-coding | upstream | 46049 | 44682381 ~ 44682708 (-) |
| G1814486 | NA | non-coding | upstream | 62411 | 44698743 ~ 44699067 (-) |
| G1814492 | NA | non-coding | upstream | 73681 | 44710013 ~ 44710321 (-) |
| G1812404 | NA | other | downstream | 1957124 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 2029864 | 42603998 ~ 42605768 (-) |
| G1812079 | LOC106582433 | other | downstream | 2245611 | 42386822 ~ 42389273 (-) |
| G1811042 | NA | other | downstream | 3029653 | 41604974 ~ 41605231 (-) |
| G1814480 | NA | other | upstream | 37115 | 44673447 ~ 44673888 (-) |
| G1815615 | LOC106582489 | other | upstream | 1202418 | 45838750 ~ 45840982 (-) |
| G1816841 | NA | other | upstream | 2589219 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 2764790 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 2834962 | 47471294 ~ 47473384 (-) |
