LOC110501922 (nf2l2)


Basic Information

Item Value
gene id LOC110501922
gene name nf2l2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 44647142 ~ 44658569 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021579795.2
CGTACATTTTCATACGATTAGAAGCAACATTTCCTTCATAGCCAAAACGTCGCTGCGCCGGACTCCTTGCTTTCTGATAGTCCACCATTTTATATTGCTGTAGGTCTAAAGGATTATAAATTGTTTGTTTTAATATATTGGACTTTGCTTTACGAAGGGACAACTCTCTATTATGATGGAAATTGAGATGCCTAAAATTCATCCTAGTCAACAGGACATAGACCTGATCGACATCTTGTGGAGGCAGGACATAGATCTGGGTGCGGGGCGCGAGGTGTTTGACTACTGCCAGCGTCAGAAGGAGCACGAGCTGCAGCAGcagagggagcaggaggaggacaagaggctgcagcagcagagggagcaggagaAGGCCCTGCTTGCTCAGCTGCAGCTGGATGAGGAGACGGGGGAGTTTGTGCCCCGCCTTGCGACCAGCGGACAGCCACTGCAGACGGCTACCTCCGCCGCACCCTCTCAAGTCATACAgGATGTCAGCTTCACTGTAGATGGGGATGCCATGTCATTTGATGAATGTATGCAACTGCTGGCAGAGACATTTCCTTTGGTAGAGGCAACTGAGACTACCTCTTCCTGTCTGGATGCCGCCGTAGCTCTAGCACCCAACAGCAGTCACATCATGATGAAATCTGATCCGCCAGCTTTGACCCAGCTGCCCTTACTCACAGCCCCACTGCTCTCACAAAGGACCTCCCCAGATTTGGAGCAGGCCTGGATGGAACTTTTGTCCCTCCCTGAGCTGCAGCAATGTCTGAATATGCAAATGGAGGACACACGGGAGCTGACCGGAGGATATCTGCCCACTAACACCACCCCTGAGGTGCAGGATCCAAACTACAGCTTCTACCCATTGCCCAACCTGGAAGAGGTGGCGTCAAACACAGCAGATGTCTGCCCACCTGAATTCATCAACACCTTTGAGGAGAGCTTTCCCAACATCGCTCCACTGGACCATCTCAATCAGATGACCTTGAAGGCTCCAGACCTCAATACTCATTTCAGTGCAGACACTTTCTGTGACATATTTTACCCAGACGTTGTCAACACAAAAGTGACCAGTGTCACCTTGCCTTGTGGCCAAGGAAATGGAGGTAACTCATTGGCAGAAATACCAAACAAGCCTATTTTTACACCAATGGAATTACAGGACCTTTCTCCTGGAGATACATTTGACAGAGACAACAAACCTGAGATAATGACAGAATGTCCAGATTCTGATTCAGGTGTTTCTGTGGAGGCAAGCTCATACTCTAGCTCTCCTGAGAAATCCATGTATGGGGACCGCTCCTTTGGTGGCTACAGCGATTCAGACATGGATGAGATGGACAGTAACCCTGGGAGTGCACAGTCTGACTACTCCGAGATGTTCTCACTGTCTTTCCAACCAGATGGCCTGCAGACACCTATTTCTGTGTTACCTCAGCAGCGGGACAAAGAGCCCAAACATGGCAAGACTGAGCCAGATGACGAGACTGGCCACAGTGAATCGCCCTTCACCAAAGACAAGAAGAGGAGGCGCTCCGAGAAGCGTCTCTCTAGAGACGAGCAGCGAGCCAAGGCCCTCCAGATCCCCTTCACCGTGGACATGATCATCGACCTGCCTGTGGATGACTTCAACGAGATGATGTCCAAGCACCAGCTCAACGAGGCCCAGCTGGCCCTGGTCAGAGACATCCGCCGGCGGGGCAAGAACAAGGTGGCTGCCCAGAACTGCCGCAAGCGCAAGATGGAGAACATCACGGAGCTGGAATATGACCTGGACTCgctgaaggaggagaaggagcgaCTGCAGACAGAGAAGACCAAGAATGACAGCAGCCTGCGGAAGATGAAGCAGCAGCTCAACACCTTGTACCTGGAGGTGTTCAGTCTGCTGAGGGACGAGGAGGGGAAGCCCTATTCTCCGTTGGAGTACTCCCTCCAGCAGACCACCGATGGCACAGTCTTCCTCGTCCCCCGCATTAAAAAGACACTTAGCAAGAAAAAGGACAGCTAGCACTTCTCTGTTTTACTACATGGTAGAGcattagtaataataatactatgcaaAGAATAACTTTGTAGTTGCTTGGCTTTTAAGCGTTAGTAAAACAGCAGAACTGTTATATAGTTTTTGCCTTCTCTTCTTGAATCTTTAATTATATTTGAGTTATTTTGTACTGGTCTCTATTTTTCCCTGATATTGTTTGTAAATACATTATTTGCTTTTGAGATATGAAAATGTGTATTGTGTATATATCATGTTTTTAGTATGCTAATTATATTGTTGCAATCACTGTTACTTCAAAGTCTGTTTTATAAACTTTATGCTGATTTGCAGCTCCATTTCCTTTTTATGTCCTGACTATTGTGCTTTTTAATGAAATAAACAGTTAAtttagtca
>XM_036959401.1
CATTTTCATACGATTAGAAGCAACATTTCCTTCATAGCCAAAACGTCGCTGCGCCGGACTCCTTGCTTTCTGATAGTCCACCATTTTATATTGCTGTAGGTCTAAAGGATTATAAATTGTTTGTTTTAATATATTGGACTTTGCTTTACGAAGGGACAACTCTCTATTATGATGGAAATTGAGATGCCTAAAATTCATCCTAGTCAACAGTCGACCGACGCGTTCATAGAAAATTCTGCAAAGTCATGGCTGGAAGTCTGGCCGGTTCATCCAACTCAATTCCGCGTGGGCGAAAAAATAACGGACATAGACCTGATCGACATCTTGTGGAGGCAGGACATAGATCTGGGTGCGGGGCGCGAGGTGTTTGACTACTGCCAGCGTCAGAAGGAGCACGAGCTGCAGCAGcagagggagcaggaggaggacaagaggctgcagcagcagagggagcaggagaAGGCCCTGCTTGCTCAGCTGCAGCTGGATGAGGAGACGGGGGAGTTTGTGCCCCGCCTTGCGACCAGCGGACAGCCACTGCAGACGGCTACCTCCGCCGCACCCTCTCAAGTCATACAgGATGTCAGCTTCACTGTAGATGGGGATGCCATGTCATTTGATGAATGTATGCAACTGCTGGCAGAGACATTTCCTTTGGTAGAGGCAACTGAGACTACCTCTTCCTGTCTGGATGCCGCCGTAGCTCTAGCACCCAACAGCAGTCACATCATGATGAAATCTGATCCGCCAGCTTTGACCCAGCTGCCCTTACTCACAGCCCCACTGCTCTCACAAAGGACCTCCCCAGATTTGGAGCAGGCCTGGATGGAACTTTTGTCCCTCCCTGAGCTGCAGCAATGTCTGAATATGCAAATGGAGGACACACGGGAGCTGACCGGAGGATATCTGCCCACTAACACCACCCCTGAGGTGCAGGATCCAAACTACAGCTTCTACCCATTGCCCAACCTGGAAGAGGTGGCGTCAAACACAGCAGATGTCTGCCCACCTGAATTCATCAACACCTTTGAGGAGAGCTTTCCCAACATCGCTCCACTGGACCATCTCAATCAGATGACCTTGAAGGCTCCAGACCTCAATACTCATTTCAGTGCAGACACTTTCTGTGACATATTTTACCCAGACGTTGTCAACACAAAAGTGACCAGTGTCACCTTGCCTTGTGGCCAAGGAAATGGAGGTAACTCATTGGCAGAAATACCAAACAAGCCTATTTTTACACCAATGGAATTACAGGACCTTTCTCCTGGAGATACATTTGACAGAGACAACAAACCTGAGATAATGACAGAATGTCCAGATTCTGATTCAGGTGTTTCTGTGGAGGCAAGCTCATACTCTAGCTCTCCTGAGAAATCCATGTATGGGGACCGCTCCTTTGGTGGCTACAGCGATTCAGACATGGATGAGATGGACAGTAACCCTGGGAGTGCACAGTCTGACTACTCCGAGATGTTCTCACTGTCTTTCCAACCAGATGGCCTGCAGACACCTATTTCTGTGTTACCTCAGCAGCGGGACAAAGAGCCCAAACATGGCAAGACTGAGCCAGATGACGAGACTGGCCACAGTGAATCGCCCTTCACCAAAGACAAGAAGAGGAGGCGCTCCGAGAAGCGTCTCTCTAGAGACGAGCAGCGAGCCAAGGCCCTCCAGATCCCCTTCACCGTGGACATGATCATCGACCTGCCTGTGGATGACTTCAACGAGATGATGTCCAAGCACCAGCTCAACGAGGCCCAGCTGGCCCTGGTCAGAGACATCCGCCGGCGGGGCAAGAACAAGGTGGCTGCCCAGAACTGCCGCAAGCGCAAGATGGAGAACATCACGGAGCTGGAATATGACCTGGACTCgctgaaggaggagaaggagcgaCTGCAGACAGAGAAGACCAAGAATGACAGCAGCCTGCGGAAGATGAAGCAGCAGCTCAACACCTTGTACCTGGAGGTGTTCAGTCTGCTGAGGGACGAGGAGGGGAAGCCCTATTCTCCGTTGGAGTACTCCCTCCAGCAGACCACCGATGGCACAGTCTTCCTCGTCCCCCGCATTAAAAAGACACTTAGCAAGAAAAAGGACAGCTAGCACTTCTCTGTTTTACTACATGGTAGAGcattagtaataataatactatgcaaAGAATAACTTTGTAGTTGCTTGGCTTTTAAGCGTTAGTAAAACAGCAGAACTGTTATATAGTTTTTGCCTTCTCTTCTTGAATCTTTAATTATATTTGAGTTATTTTGTACTGGTCTCTATTTTTCCCTGATATTGTTTGTAAATACATTATTTGCTTTTGAGATATGAAAATGTGTATTGTGTATATATCATGTTTTTAGTATGCTAATTATATTGTTGCAATCACTGTTACTTCAAAGTCTGTTTTATAAACTTTATGCTGATTTGCAGCTCCATTTCCTTTTTATGTCCTGACTATTGTGCTTTTTAATGAAATAAACAGTTAAtttagtca
>XM_036959402.1
ttctcgctactcctcctcctcagaagaggaggaagaatgctGTTACAGCGAGGCATACCAGGAGGTCCTAGTGGTGTTGCTACTGTATACACCAGAGAGGACATAGACATAGACCTGATCGACATCTTGTGGAGGCAGGACATAGATCTGGGTGCGGGGCGCGAGGTGTTTGACTACTGCCAGCGTCAGAAGGAGCACGAGCTGCAGCAGcagagggagcaggaggaggacaagaggctgcagcagcagagggagcaggagaAGGCCCTGCTTGCTCAGCTGCAGCTGGATGAGGAGACGGGGGAGTTTGTGCCCCGCCTTGCGACCAGCGGACAGCCACTGCAGACGGCTACCTCCGCCGCACCCTCTCAAGTCATACAgGATGTCAGCTTCACTGTAGATGGGGATGCCATGTCATTTGATGAATGTATGCAACTGCTGGCAGAGACATTTCCTTTGGTAGAGGCAACTGAGACTACCTCTTCCTGTCTGGATGCCGCCGTAGCTCTAGCACCCAACAGCAGTCACATCATGATGAAATCTGATCCGCCAGCTTTGACCCAGCTGCCCTTACTCACAGCCCCACTGCTCTCACAAAGGACCTCCCCAGATTTGGAGCAGGCCTGGATGGAACTTTTGTCCCTCCCTGAGCTGCAGCAATGTCTGAATATGCAAATGGAGGACACACGGGAGCTGACCGGAGGATATCTGCCCACTAACACCACCCCTGAGGTGCAGGATCCAAACTACAGCTTCTACCCATTGCCCAACCTGGAAGAGGTGGCGTCAAACACAGCAGATGTCTGCCCACCTGAATTCATCAACACCTTTGAGGAGAGCTTTCCCAACATCGCTCCACTGGACCATCTCAATCAGATGACCTTGAAGGCTCCAGACCTCAATACTCATTTCAGTGCAGACACTTTCTGTGACATATTTTACCCAGACGTTGTCAACACAAAAGTGACCAGTGTCACCTTGCCTTGTGGCCAAGGAAATGGAGGTAACTCATTGGCAGAAATACCAAACAAGCCTATTTTTACACCAATGGAATTACAGGACCTTTCTCCTGGAGATACATTTGACAGAGACAACAAACCTGAGATAATGACAGAATGTCCAGATTCTGATTCAGGTGTTTCTGTGGAGGCAAGCTCATACTCTAGCTCTCCTGAGAAATCCATGTATGGGGACCGCTCCTTTGGTGGCTACAGCGATTCAGACATGGATGAGATGGACAGTAACCCTGGGAGTGCACAGTCTGACTACTCCGAGATGTTCTCACTGTCTTTCCAACCAGATGGCCTGCAGACACCTATTTCTGTGTTACCTCAGCAGCGGGACAAAGAGCCCAAACATGGCAAGACTGAGCCAGATGACGAGACTGGCCACAGTGAATCGCCCTTCACCAAAGACAAGAAGAGGAGGCGCTCCGAGAAGCGTCTCTCTAGAGACGAGCAGCGAGCCAAGGCCCTCCAGATCCCCTTCACCGTGGACATGATCATCGACCTGCCTGTGGATGACTTCAACGAGATGATGTCCAAGCACCAGCTCAACGAGGCCCAGCTGGCCCTGGTCAGAGACATCCGCCGGCGGGGCAAGAACAAGGTGGCTGCCCAGAACTGCCGCAAGCGCAAGATGGAGAACATCACGGAGCTGGAATATGACCTGGACTCgctgaaggaggagaaggagcgaCTGCAGACAGAGAAGACCAAGAATGACAGCAGCCTGCGGAAGATGAAGCAGCAGCTCAACACCTTGTACCTGGAGGTGTTCAGTCTGCTGAGGGACGAGGAGGGGAAGCCCTATTCTCCGTTGGAGTACTCCCTCCAGCAGACCACCGATGGCACAGTCTTCCTCGTCCCCCGCATTAAAAAGACACTTAGCAAGAAAAAGGACAGCTAGCACTTCTCTGTTTTACTACATGGTAGAGcattagtaataataatactatgcaaAGAATAACTTTGTAGTTGCTTGGCTTTTAAGCGTTAGTAAAACAGCAGAACTGTTATATAGTTTTTGCCTTCTCTTCTTGAATCTTTAATTATATTTGAGTTATTTTGTACTGGTCTCTATTTTTCCCTGATATTGTTTGTAAATACATTATTTGCTTTTGAGATATGAAAATGTGTATTGTGTATATATCATGTTTTTAGTATGCTAATTATATTGTTGCAATCACTGTTACTTCAAAGTCTGTTTTATAAACTTTATGCTGATTTGCAGCTCCATTTCCTTTTTATGTCCTGACTATTGTGCTTTTTAATGAAATAAACAGTTAAtttagtca

Function

NR:

description
nuclear factor erythroid 2-related factor 2-like

GO:

id name namespace
GO:0050896 response to stimulus biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09041 NFE2N, CNC; nuclear factor erythroid 2, invertebrate

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021579795.2 False 2405 mRNA 0.48 5 44647142 44658569
XM_036959401.1 False 2494 mRNA 0.48 6 44647146 44658569
XM_036959402.1 True 2296 mRNA 0.49 5 44654045 44658569

Neighbor

gene id symbol gene type direction distance location
LOC110501918 LOC106582467 coding upstream 73224 44566863 ~ 44573921 (+)
LOC110501916 LOC106582463 coding upstream 174274 44468192 ~ 44472868 (+)
LOC110502170 LOC106582462 coding upstream 184125 44452252 ~ 44463017 (+)
LOC110501915 LOC106582460 coding upstream 208489 44381552 ~ 44438653 (+)
LOC110501911 LOC106582457 coding upstream 295265 44326910 ~ 44351877 (+)
LOC110502137 LOC106582494 coding downstream 325342 44983911 ~ 44987844 (+)
LOC110501931 lnpa coding downstream 351178 44944427 ~ 45022170 (+)
LOC110501942 atp5g2 coding downstream 514322 45172891 ~ 45175477 (+)
LOC110501941 LOC106582491 coding downstream 517326 45175895 ~ 45251964 (+)
LOC118943613 LOC106582482 coding downstream 592213 45250782 ~ 45252926 (+)
G1813695 NA non-coding upstream 105462 44541015 ~ 44541680 (+)
G1813679 NA non-coding upstream 126553 44520062 ~ 44520589 (+)
G1813669 NA non-coding upstream 136767 44509411 ~ 44510375 (+)
G1813664 NA non-coding upstream 150566 44495892 ~ 44496576 (+)
G1813654 NA non-coding upstream 162239 44484434 ~ 44484903 (+)
G1813749 NA non-coding downstream 1519 44660088 ~ 44660498 (+)
G1813752 NA non-coding downstream 17378 44675947 ~ 44676167 (+)
G1813754 NA non-coding downstream 20966 44679535 ~ 44679832 (+)
G1813759 NA non-coding downstream 30759 44689328 ~ 44689591 (+)
G1814493 NA non-coding downstream 52545 44711114 ~ 44711318 (+)
G1813665 LOC106582464 other upstream 139091 44498457 ~ 44508051 (+)
G1813588 ino80d other upstream 275219 44362661 ~ 44371923 (+)
LOC110502169 LOC106582455 other upstream 327031 44148629 ~ 44324651 (+)
G1813442 NA other upstream 536275 44108244 ~ 44110867 (+)
G1814811 NA other downstream 451978 45110547 ~ 45111229 (+)
LOC110502177 LOC106582482 other downstream 863351 45521920 ~ 45527893 (+)
G1815113 LOC106582487 other downstream 1066578 45725039 ~ 45726328 (+)
G1815137 NA other downstream 1122930 45781499 ~ 45782536 (+)

Expression


Co-expression Network