XLOC_037007 (mpp4a)


Basic Information

Item Value
gene id XLOC_037007
gene name mpp4a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 13682133 ~ 13711991 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072849
GTGGCACCGACTAAGCTTTTTGGATTTATGGGATGCTTTCTCATGTTTCTTCTTTTCCATTTTAGCGATAAAGTTGGAGCGGCTGTATTGTGTAAGTGTGTCTCTAAAAGCAGAAGGAGGTAAGAAGCTTTGAGTGGCAGGCGGTCTTATAGAAGTGCTCACAGAGAGAGGACGGCCCCTCGCAGGATTAAGTGGGATAGAAAAGGATTACAATCTGAGTTTCCAGAGACATTTTATAGTAAAATCACATGCATGTTGGCGAGCCAGAAGCTGAAGATCACTTTAATATGAAGCTCAGCTGAAGGGATGGCACCTAAAGGTTTTGATGTGGGATGTTGATGCGTCCGTGTGGTTTGAGAAAGACGGTGACAGGAGCGTCTGAAGACTGCAGTGATCTGATGAACAGAGAAGCTTGTCATGTGGCAGTCGGTGGAGGAGGAGTCAATGGCACAATCTGCATATGATGACAATGATGCAGGTCTGGCTCAGGTCTTGGCAGAAGTGTTAGAGGAAGTGAGGCAGTCCATAGACAGAGATATTAATGGTGCTGATCTTTTACACAGTCTCCTCAGTGCTCCTTGGCTTTACTCTCTTCTCAGGGTATATGAGTGTCTGGTGCAGCACAGTCAGGATGCTCCAAATCCATACCTGCCTTATTCCACAAGACTTTCTCAGGAGATTACAGCCAGTGTGCGAGGACTGCCTGCTCCCTCCTCTGATGCACAAGAGCTGTATATTTTGCTAAAAAGCCCTCATATGCAGGCTTTGCTCTCTGCCCATGATTCTGTGGCTCAGAGAGATTATGGGCCAGTGCTTCCGCCCCTTCCTGACAATCTGTCTGACAATGAGGAGGCTGTGAGGATTGTTTGCCTTGTAAAGAACAAACAGCCTCTGGGAGCAACAATTAGGAAGGATGAGAAAACAGGAAACATCTTCATTGCAAGGGTGATACATGGAGGACTGGCAGACCGCAGTGGACTTCTTAATTCTGGTGACAAGCTGGTGGAAGTAAATGGACAGAAAGTTCGAGGAATGCAGCCTGAGCATGTCATAAATATTCTGGTTCGATCTCAAGGAAATATTCTGTTTAAAGTTATCCCTAATTCAACACAACCCACCAACAGTCAAGCAACCCTGTATGTGAGAGCCATGGTGGACTACAGTCCTCTGCAGGACCCTGCAATCCCCTGTCCAGATGTTGGCATGGCCTTCAGTAAAGGAGATTTGCTGGAGATTGTAGACCAGAGGGACATCCGATGGTGGCAAGCCAGAAAACTCCACAGTGCCTCGCTGTGTTGCGGTCTTATTCCCTCCACTAACCAGTTCAGACACAAACAAAGGGAGCTGTGGTGGTCTCAACCTTATCAAGCTCACACCTGCATCAGACCCTTGAGCGCAGATGATGTTGGAGAAGAGGAAATAACGGACAAAATTAAATGCACTGAAACAGatGAAGAAGATTTTGAGTTCGTTTCAGAGGAGGGTGAGAATGGTGAACACATGCAGGGCTTATACATAGCGGGGTTCCGGCACAGTCTTCGCGTGTGGAGGAGGAAATCATACAGCAAGCGAAAGCCGTCATGTTATTCCTGCAGCATCAGTAGCTGTCATAACACCTCAGCCAACCTTTATGAAGAGGTGGTCCACTATCAGCGCCACATTGACGATCCCCCGCGTCTCATTGTGCTGATTGGTCCATCAGGAGTGGGTGTAAATGAACTAAGAAGGAGGCTAATCAAAATCAATCCTAATACATACCAGGGACCGGTATCTTACACGACACGGCCCCAAAATATGGGTGAGAAGAATGGGCGTGAGTATCACTTTGTGACCAAGGAAGTGTTTGCCTATATGGTGGTTAATCACAAATTTTATGAGTATGAAGAGCATAATGGACACATGTATGGAACCAGCTTGGACTCGGTTAAAGATGTATTGGACAATGGGAAAATATGTGTTATTGACATTGAACCTCATTGCATTCAATCAGTCAGGAACAAAATGCTGAAGCCCTACATCATATATGTGCGTCCACCATCGCCTGAAGGCATGAGACAAACAAGAAAAGACCCACATTTTCTTGCCAATAGATACATTAAGAGATACTTCCATGATAAAGACTTTGAGGACATTGAGGACGTGAGCAGGGCCATGGAGGCCAAGTACCGTCAGTTTTTTGACTGTGTGATTGTAAATGAAGATCTGCAAGATTCATGCATGGATTTGTTCACCGCTATACAACATGCTCAAGAAGAACCGCAGTGGATTCCTGCCAGCTGGTTTACTCCTGATCGTACATGA
>TCONS_00072850
TTCTCCTTCAGATGCAGGTCTGGCTCAGGTCTTGGCAGAAGTGTTAGAGGAAGTGAGGCAGTCCATAGACAGAGATATTAATGGTGCTGATCTTTTACACAGTCTCCTCAGTGCTCCTTGGCTTTACTCTCTTCTCAGGGTATATGAGTGTCTGGTGCAGCACAGTCAGGATGCTCCAAATCCATACCTGCCTTATTCCACAAGACTTTCTCAGGAGGAGCTGTATATTTTGCTAAAAAGCCCTCATATGCAGGCTTTGCTCTCTGCCCATGATTCTGTGGCTCAGAGAGATTATGGGCCAGTGCTTCCGCCCCTTCCTGACAATCTGTCTGACAATGAGGAGGCTGTGAGGATTGTTTGCCTTGTAAAGAACAAACAGCCTCTGGGAGCAACAATTAGGAAGGATGAGAAAACAGGAAACATCTTCATTGCAAGGGTGATACATGGAGGACTGGCAGACCGCAGTGGACTTCTTAATTCTGGTGACAAGCTGGTGGAAGTAAATGGACAGAAAGTTCGAGGAATGCAGCCTGAGCATGTCATAAATATTCTGGTTCGATCTCAAGGAAATATTCTGTTTAAAGTTATCCCTAATTCAACACAACCCACCAACAGTCAAGCAACCCTGTATGTGAGAGCCATGGTGGACTACAGTCCTCTGCAGGACCCTGCAATCCCCTGTCCAGATGTTGGCATGGCCTTCAGTAAAGGAGATTTGCTGGAGATTGTAGACCAGAGGGACATCCGATGGTGGCAAGCCAGAAAACTCCACAGTGCCTCGCTGTGTTGCGGTCTTATTCCCTCCACTAACCAGTTCAGACACAAACAAAGGGAGCTGTGGTGGTCTCAACCTTATCAAGCTCACACCTGCATCAGACCCTTGAGCGCAGATGATGTTGGAGAAGAGGAAATAACGGACAA
>TCONS_00072851
CGGGGTTCCGGCACAGTCTTCGCGTGTGGAGGAGGAAATCATACAGCAAGCGAAAGCCGTCATGTTATTCCTGCAGCATCAGTAGCTGTCATAACACCTCAGCCAACCTTTATGAAGAGGTGGTCCACTATCAGCGCCACATTGACGATCCCCCGCGTCTCATTGTGCTGATTGGTCCATCAGGAGTGGGTGTAAATGAACTAAGAAGGAGGCTAATCAAAATCAATCCTAATACATACCAGGGACCGGTATCTTACACGACACGGCCCCAAAATATGGGTGAGAAGAATGGGCGTGAGTATCACTTTGTGACCAAGGAAGTGTTTGCCTATATGGTGGTTAATCACAAATTTTATGAGTATGAAGAGCATAATGGACACATGTATGGAACCAGCTTGGACTCGGTTAAAGATGTATTGGACAATGGGAAAATATGTGTTATTGACATTGAACCTCATTGCATTCAATCAGTCAGGAACAAAATGCTGAAGCCCTACATCATATATGTGCGTCCACCATCGCCTGAAGGCATGAGACAAACAAGAAAAGACCCACATTTTCTTGCCAATAGATACATTAAGAGATACTTCCATGATAAAGACTTTGAGGACATTGAGGACGTGAGCAGGGCCATGGAGGCCAAGTACCGTCAGTTTTTTGACTGTGTGATTGTAAATGAAGATCTGCAAGATTCATGCATGGATTTGTTCACCGCTATACAACATGCTCAAGAAGAACCGCAGTGGATTCCTGCCAGCTGGTTTACTCCTGATCGTACATGA

Function

symbol description
mpp4a Orthologous to human MPP4 (membrane palmitoylated protein 4).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-523 Orthologous to human MPP4 (membrane palmitoylated protein 4).

Ensembl:

ensembl_id ENSDARG00000058222

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072849 False 2301 mRNA 0.46 21 13682133 13711991
TCONS_00072850 False 921 mRNA 0.48 11 13685921 13705019
TCONS_00072851 True 782 mRNA 0.45 6 13707933 13711991

Neighbor

gene id symbol gene type direction distance location
XLOC_037006 als2a coding upstream 9933 13628635 ~ 13672200 (+)
XLOC_037005 NA coding upstream 210606 13469074 ~ 13471527 (+)
XLOC_037004 CR407547.1 coding upstream 233485 13448529 ~ 13448648 (+)
XLOC_037003 carf coding upstream 430806 13229585 ~ 13251327 (+)
XLOC_037002 fam117bb coding upstream 469343 13120419 ~ 13212790 (+)
XLOC_037008 tmem237a coding downstream 2388 13714379 ~ 13728937 (+)
XLOC_037009 abi2a coding downstream 21477 13733468 ~ 13799692 (+)
XLOC_037010 cd28 coding downstream 273576 13985567 ~ 13989879 (+)
XLOC_037011 cd28l coding downstream 287629 13999620 ~ 14005116 (+)
XLOC_037012 si:ch211-67e16.3 coding downstream 298832 14010823 ~ 14019390 (+)
XLOC_036996 CR752651.1 non-coding upstream 854013 12828005 ~ 12828120 (+)
XLOC_036995 NA non-coding upstream 1213090 12461619 ~ 12469043 (+)
XLOC_036991 CR847976.1 non-coding upstream 2234224 11447777 ~ 11447909 (+)
XLOC_037014 NA non-coding downstream 400484 14112475 ~ 14117000 (+)
XLOC_037015 AL929266.1 non-coding downstream 431082 14143073 ~ 14147153 (+)
XLOC_037016 NA non-coding downstream 440177 14152168 ~ 14197503 (+)
XLOC_037018 NA non-coding downstream 1805542 15517533 ~ 15530690 (+)
XLOC_037019 NA non-coding downstream 1815620 15527611 ~ 15529457 (+)

Expression


Co-expression Network