prkag3b (LOC106592041)


Basic Information

Item Value
gene id prkag3b
gene name LOC106592041
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 50122888 ~ 50243945 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038852.1
cacacacacacacacacacacacacacacacacactctccctctatctccccccgtTCCCTCTGACAGACTAGTCCCCCTCATGCAACAGTCCGCTCCCTCGCTCCCAATTTAGTCCCCGCTGCTCTCAGGGACTGGAGCACAGTTGGATCATGCTCAGGAGGTGACACGAGCAGCCCCAGTAAAAccgtctctctctcagcctgctccgtccactcctctccctctgtccagcccagcctctcctctcttcagccTCAGAGCCATGGAGCCTTCCCATGAGGTCCCTTTCATGGATGGTCTCACTATGAAGGAGATAGCCCCAGCCTCGGCCCCAGATGCCAACGTCTACACCAAGTTCATGAGGAACCACTGCTGCTACGACGCCATTCCTACCAGCTCCAAACTGGTCATCTTCGACACCACCTTGCAGgtaaAAAAAGCTTTCTTTGCTCTGGTGGCGAACGGTGTTCGGGCGGCGCCGCTGTGGGATAACAAGCTGCAGTGTTTTGTAGGTATGCTGACCATCACAGACTTTATCAACATTCTCCACCGGTATTGGCAGTCTCCTCTGGTAGAGATCTACGAACTGGAGGAGCACAAGATAGAAGACTGTAGAGAGGAATTGCTGAAGTACTCCAACCATACTCTGATCAGTATCACACCTGACTCCAGCCTTTTTGATGCCATCTATTCTCTGCTGAAGTATAAGATCCATCGGCTGCCTGTGATCGACCCAGAGTCTGGCAACGTCCTGCACATCCTCACCCACAAACGCATCCTCAAGTTCCTGCATATCTTTGGCACCATGATCCCGAAGCCTCGGTACCTCCAGAAGAGAATTGAGGAGGTGGACATTGGAACATTTAAACAGATTGCTACTGTCCGGGAGACAGACACGGTGTACGACGCCCTGGCCATCTTCGTACAGCGGAGGGTTTCCGCTCTGCCAGTGGTCAATGAGGAGGGGAAAATCAAGGCCCTGTACTCCAGGTTTGATGTGATTAATCTGGCCGCTCAGAAGAACTACAATAACCTGAACATGACCATGCAGGAGGCGATCAGTAGCAGGGCCTGCTGTGTGGACGGGGTGCTGAAGTGTTACCCTCACGAGACTCTGGAGACTATCATCGATCGTATTGCTAAGGCAGAGgtcCACCGTCTCGTGCTGGTGGATAAAGATGACGTGGTGGGGGGGATCGTCTcgctctctgacctcctccaggCCCTGGTCTTGACCCCGGCAGGTATTGATGCCCTTTTCTCTTAGCACCTGACTGTGGGTTGGGGGGTCCATCTATCACTACCCACCACCTCCCAGCCCCTCCCCAGCCCCAACCTCAGAGATTTCACGAAGAGCTCAACCACTGAAGACAAATTGGGACACTAATAATGAATGAAGACAGAAACTCTGTAAATATTTTTTTGATTTTGCTGGGTAACTTTAAAATGCTTTTTAAAAGGTTTATTCTGCAGGATAACACCAATACTTTCATATTTTTATATTCATACTTGTGTTTGTTTAGTACTTGTTtgtatacattattttttttaataatgtaAATTTTATAAAATCTCTCCTATCCCGTTCAAaactattatttatttatatatatatatatatatatatacagtaccagtcaatagtttggacacacctactcattaaagggtttttctttatatttactatttgctacattgtagaataatagtgaa
>XM_036959479.1
cacacacacacacacacacacacacacacacacacactctccctctatctccccccgtTCCCTCTGACAGACTAGTCCCCCTCATGCAACAGTCCGCTCCCTCGCTCCCAATTTAGTCCCCGCTGCTCTCAGGGACTGGAGCACAGTTGGATCATGCTCAGGAGGTGACACGAGCAGCCCCAGTAAAAccgtctctctctcagcctgctccgtccactcctctccctctgtccagcccagcctctcctctcttcagccTCAGAGCCATGGAGCCTTCCCATGAGGTCCCTTTCATGGATGGTCTCACTATGAAGGAGATAGCCCCAGCCTCGGCCCCAGATGCCAACGTCTACACCAAGTTCATGAGGAACCACTGCTGCTACGACGCCATTCCTACCAGCTCCAAACTGGTCATCTTCGACACCACCTTGCAGgtaaAAAAAGCTTTCTTTGCTCTGGTGGCGAACGGTGTTCGGGCGGCGCCGCTGTGGGATAACAAGCTGCAGTGTTTTGTAGGTATGCTGACCATCACAGACTTTATCAACATTCTCCACCGGTATTGGCAGTCTCCTCTGGTAGAGATCTACGAACTGGAGGAGCACAAGATAGAAGACTGTAGAGAGGAATTGCTGAAGTACTCCAACCATACTCTGATCAGTATCACACCTGACTCCAGCCTTTTTGATGCCATCTATTCTCTGCTGAAGTATAAGATCCATCGGCTGCCTGTGATCGACCCAGAGTCTGGCAACGTCCTGCACATCCTCACCCACAAACGCATCCTCAAGTTCCTGCATATCTTTGGCACCATGATCCCGAAGCCTCGGTACCTCCAGAAGAGAATTGAGGAGGTGGACATTGGAACATTTAAACAGATTGCTACTGTCCGGGAGACAGACACGGTGTACGACGCCCTGGCCATCTTCGTACAGCGGAGGGTTTCCGCTCTGCCAGTGGTCAATGAGGAGGGGAAAATCAAGGCCCTGTACTCCAGGTTTGATGTGATTAATCTGGCCGCTCAGAAGAACTACAATAACCTGAACATGACCATGCAGGAGGCGATCAGTAGCAGGGCCTGCTGTGTGGACGGGGTGCTGAAGTGTTACCCTCACGAGACTCTGGAGACTATCATCGATCGTATTGCTAAGGCAGAGgtcCACCGTCTCGTGCTGGTGGATAAAGATGACGTGGTGGGGGGGATCGTCTcgctctctgacctcctccaggCCCTGGTCTTGACCCCGGCAGAGATTTCACGAAGAGCTCAACCACTGAAGACAAATTGGGACACTAATAATGAATGAAGACAGAAACTCTGTAAATATTTTTTTGATTTTGCTGGGTAACTTTAAAATGCTTTTTAAAAGGTTTATTCTGCAGGATAACACCAATACTTTCATATTTTTATATTCATACTTGTGTTTGTTTAGTACTTGTTtgtatacattattttttttaataatgtaAATTTTATAAAATCTCTCCTATCCCGTTCAAaactattatttatttatatatatatatatatatatatacagtaccagtcaatagtttggacacacctactcattaaagggtttttctttatatttactatttgctacattgtagaataatagtgaa
>XM_036959480.1
cacacacacacacacacacacacacacacacacacactctccctctatctccccccgtTCCCTCTGACAGACTAGTCCCCCTCATGCAACAGTCCGCTCCCTCGCTCCCAATTTAGTCCCCGCTGCTCTCAGGGACTGGAGCACAGTTGGATCATGCTCAGGAGGTGACACGAGCAGCCCCAGTAAAAccgtctctctctcagcctgctccgtccactcctctccctctgtccagcccagcctctcctctcttcagccTCAGAGCCATGGAGCCTTCCCATGAGGTCCCTTTCATGGATGGTCTCACTATGAAGGAGATAGGGTGCTCCACCCCTGTTCCTCCCTGCAGCCCCAGCCTCGGCCCCAGATGCCAACGTCTACACCAAGTTCATGAGGAACCACTGCTGCTACGACGCCATTCCTACCAGCTCCAAACTGGTCATCTTCGACACCACCTTGCAGgtaaAAAAAGCTTTCTTTGCTCTGGTGGCGAACGGTGTTCGGGCGGCGCCGCTGTGGGATAACAAGCTGCAGTGTTTTGTAGGTATGCTGACCATCACAGACTTTATCAACATTCTCCACCGGTATTGGCAGTCTCCTCTGGTAGAGATCTACGAACTGGAGGAGCACAAGATAGAAGACTGTAGAGAGGAATTGCTGAAGTACTCCAACCATACTCTGATCAGTATCACACCTGACTCCAGCCTTTTTGATGCCATCTATTCTCTGCTGAAGTATAAGATCCATCGGCTGCCTGTGATCGACCCAGAGTCTGGCAACGTCCTGCACATCCTCACCCACAAACGCATCCTCAAGTTCCTGCATATCTTTGGCACCATGATCCCGAAGCCTCGGTACCTCCAGAAGAGAATTGAGGAGGTGGACATTGGAACATTTAAACAGATTGCTACTGTCCGGGAGACAGACACGGTGTACGACGCCCTGGCCATCTTCGTACAGCGGAGGGTTTCCGCTCTGCCAGTGGTCAATGAGGAGGGGAAAATCAAGGCCCTGTACTCCAGGTTTGATGTGATTAATCTGGCCGCTCAGAAGAACTACAATAACCTGAACATGACCATGCAGGAGGCGATCAGTAGCAGGGCCTGCTGTGTGGACGGGGTGCTGAAGTGTTACCCTCACGAGACTCTGGAGACTATCATCGATCGTATTGCTAAGGCAGAGgtcCACCGTCTCGTGCTGGTGGATAAAGATGACGTGGTGGGGGGGATCGTCTcgctctctgacctcctccaggCCCTGGTCTTGACCCCGGCAGAGATTTCACGAAGAGCTCAACCACTGAAGACAAATTGGGACACTAATAATGAATGAAGACAGAAACTCTGTAAATATTTTTTTGATTTTGCTGGGTAACTTTAAAATGCTTTTTAAAAGGTTTATTCTGCAGGATAACACCAATACTTTCATATTTTTATATTCATACTTGTGTTTGTTTAGTACTTGTTtgtatacattattttttttaataatgtaAATTTTATAAAATCTCTCCTATCCCGTTCAAaactattatttatttatatatatatatatatatatatacagtaccagtcaatagtttggacacacctactcattaaagggtttttctttatatttactatttgctacattgtagaataatagtgaa
>XM_036959481.1
acacacacacacacacacacacacacacacacacacactctccctctatctccccccgtTCCCTCTGACAGACTAGTCCCCCTCATGCAACAGTCCGCTCCCTCGCTCCCAATTTAGTCCCCGCTGCTCTCAGGGACTGGAGCACAGTTGGATCATGCTCAGGAGGTGACACGAGCAGCCCCAGTAAAAccgtctctctctcagcctgctccgtccactcctctccctctgtccagcccagcctctcctctcttcagccTCAGAGCCATGGAGCCTTCCCATGAGgtaaAAAAAGCTTTCTTTGCTCTGGTGGCGAACGGTGTTCGGGCGGCGCCGCTGTGGGATAACAAGCTGCAGTGTTTTGTAGGTATGCTGACCATCACAGACTTTATCAACATTCTCCACCGGTATTGGCAGTCTCCTCTGGTAGAGATCTACGAACTGGAGGAGCACAAGATAGAAGACTGTAGAGAGGAATTGCTGAAGTACTCCAACCATACTCTGATCAGTATCACACCTGACTCCAGCCTTTTTGATGCCATCTATTCTCTGCTGAAGTATAAGATCCATCGGCTGCCTGTGATCGACCCAGAGTCTGGCAACGTCCTGCACATCCTCACCCACAAACGCATCCTCAAGTTCCTGCATATCTTTGGCACCATGATCCCGAAGCCTCGGTACCTCCAGAAGAGAATTGAGGAGGTGGACATTGGAACATTTAAACAGATTGCTACTGTCCGGGAGACAGACACGGTGTACGACGCCCTGGCCATCTTCGTACAGCGGAGGGTTTCCGCTCTGCCAGTGGTCAATGAGGAGGGGAAAATCAAGGCCCTGTACTCCAGGTTTGATGTGATTAATCTGGCCGCTCAGAAGAACTACAATAACCTGAACATGACCATGCAGGAGGCGATCAGTAGCAGGGCCTGCTGTGTGGACGGGGTGCTGAAGTGTTACCCTCACGAGACTCTGGAGACTATCATCGATCGTATTGCTAAGGCAGAGgtcCACCGTCTCGTGCTGGTGGATAAAGATGACGTGGTGGGGGGGATCGTCTcgctctctgacctcctccaggCCCTGGTCTTGACCCCGGCAGAGATTTCACGAAGAGCTCAACCACTGAAGACAAATTGGGACACTAATAATGAATGAAGACAGAAACTCTGTAAATATTTTTTTGATTTTGCTGGGTAACTTTAAAATGCTTTTTAAAAGGTTTATTCTGCAGGATAACACCAATACTTTCATATTTTTATATTCATACTTGTGTTTGTTTAGTACTTGTTtgtatacattattttttttaataatgtaAATTTTATAAAATCTCTCCTATCCCGTTCAAaactattatttatttatatatatatatatatatatatacagtaccagtcaatagtttggacacacctactcattaaagggtttttctttatatttactatttgctacattgtagaataatagtgaa

Function

NR:

description
5'-AMP-activated protein kinase subunit gamma-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038852.1 False 1718 mRNA 0.48 13 50122888 50243942
XM_036959479.1 False 1623 mRNA 0.47 13 50122888 50243944
XM_036959480.1 False 1651 mRNA 0.48 13 50122888 50243944
XM_036959481.1 True 1474 mRNA 0.47 11 50122888 50243945

Neighbor

gene id symbol gene type direction distance location
LOC118943599 NA coding downstream 641928 49470102 ~ 49480960 (-)
LOC118943644 NA coding downstream 1158255 48962212 ~ 48964633 (-)
LOC110502188 LOC106582504 coding downstream 1476967 48505445 ~ 48645921 (-)
LOC110501956 itgav coding downstream 1902846 48139761 ~ 48220042 (-)
LOC110501953 ihh coding downstream 2058435 48057851 ~ 48064453 (-)
si:ch211-67e16.4 LOC106582542 coding upstream 216149 50460094 ~ 50465680 (-)
si:ch211-67e16.3 LOC106582540 coding upstream 227802 50471747 ~ 50484670 (-)
cd28 LOC100136275 coding upstream 251122 50495067 ~ 50496991 (-)
LOC118943619 NA coding upstream 278059 50521227 ~ 50533748 (-)
tmem237a LOC105009128 coding upstream 476752 50720697 ~ 50753131 (-)
G1819185 NA non-coding downstream 12917 50109770 ~ 50109971 (-)
G1819148 NA non-coding downstream 119589 50002783 ~ 50003299 (-)
G1819125 NA non-coding downstream 170350 49951604 ~ 49952538 (-)
G1819065 NA non-coding downstream 314864 49807774 ~ 49808024 (-)
G1819055 NA non-coding downstream 335940 49785942 ~ 49786948 (-)
G1819252 NA non-coding upstream 65316 50309261 ~ 50309620 (-)
G1819255 NA non-coding upstream 83088 50327033 ~ 50327721 (-)
G1819266 NA non-coding upstream 131149 50375094 ~ 50379569 (-)
G1819274 NA non-coding upstream 144362 50388307 ~ 50388550 (-)
G1819843 NA non-coding upstream 154537 50398482 ~ 50400690 (-)
G1818802 NA other downstream 403510 49717632 ~ 49719378 (-)
G1818417 NA other downstream 956521 49165751 ~ 49166367 (-)
G1818393 NA other downstream 996771 49125514 ~ 49126117 (-)
G1818059 NA other downstream 1495042 48627364 ~ 48627846 (-)
G1817968 NA other downstream 1652853 48469598 ~ 48470035 (-)
G1819250 NA other upstream 57856 50301801 ~ 50305038 (-)
G1820012 NA other upstream 652627 50896572 ~ 50897153 (-)
G1820053 LOC106582548 other upstream 779493 51023438 ~ 51026181 (-)

Expression


Co-expression Network