tmem237a (LOC105009128)


Basic Information

Item Value
gene id tmem237a
gene name LOC105009128
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 50720697 ~ 50753131 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036959498.1
TTTACCGAGTTAATACACTCATTCTGTTCTCTATCAGCTACGGGTCTGGTACAGGTTTGACAGCTAGCCAACCGATAGGCTGTCACAACCTAATCAACCTGCTTATAGCCAACCAATAGGCTGTCACAACCAACCTGCTTATCCTCGGGTCAATCTAAGCTGTTTCTGAGAAGAGTCTCGTCTCAGTGCTAGGAGACAGTCCAGTGGGTGACACCATAGGAGACGTGCGGTCGGAGAGGGAAGCCAAAGAAGTAGTACCTTTTGGATGATTGAAGTGGACTAACATACTTTTGTTGATTTGTATCtgatattattgttgttgttttctcctCTGGACTCTTTTCATGGTTGTTGCCGAACGCAGTCAAGACAGAGCcgACGTGATGCCAATCACCAAATCAACCAAGAAGAAGAAATGGAAGAAGGAAGCCGGTGATGTGGAGGACCCAGAAGTGTGTTCTGCTGTCTGCTACCCAGGCAGCCCTCCAGAGCCAGGTATTGAGATGGAGGTACTGGCCAGTAGGAGGCAGTCAGAGACGATCCCTCTGACCCCTGAACCACAGGAAGTTCCACcacagaagaggaagaagaaaaagaaagctCAGACCCAAGACATGGAGGAGCCGGAGCTGGTGAATGGGGATGGGATGGACCAGCACACGGACGGGGAGGAACAAGCCGTCACCAGGACAAAAACCAAGAGGAAGAAGAAGTCCAAGATTGACATGCATTACGCCAATGACCTGGGTGTGGAGGAAGGTGACATCGTCAGTGGTTTGCACCATGCTATCCCCCAGCATTCCCTGTTTTCTTCTCCTCTGGGCCACAGCCAGCCTGTCGGCAAAGTGTTTGTGGAGAGAAACAAGCGTTTCCAGGCGACTGACCCGCCCAAACACAATGCACATCTACCTGACCACATGGAGGATTACATGGAGGTCAGACCCCTCTGGACGACCAGGGACGTAGCTATGAGAGTACACAGTGGCTTCAGagtGATAGGTCTGTTTTCCCATGGCTTCCTGGCTGGCTATGCAGTGTGGAACACTGTGGTGGTGTATGTTTTGGCTGGGGAGCAGTTCACCACCCTACCTAACCTGCTACAGCAGTACCACTCCTTGGCCTACCCTGCTCAGTCTCTCCTCTACCTACTGTTGGCTATCAGCACAGTGTCTGCCTTCGACAGGGTGAACCTGGCGAAGGCCTCCATGGCTCTAAGAGGATTCCTCACTCTGGACCCGGCCGCTCTGGCCTCCTTCTTGTACTTTACAGCGCTCATCCTGTCCCTCAGTCAGCAGATGACCAGCGATCGTATCAACCTCTACCCCACTGCCAACGAGACCCTGTGgcccCCTGGTTCAGAGCACCAAATCCTCCAGCCCTGGATAGTGGTCAACCTGGTGATAGCCCTGTTAGTGGGTCTGGCCTGGGCCTTCGTCTCAACGCGACCAGACATGGACTACACCGAAGAGTTTTTAATGGCGATGGCAGTTGAAGACCTCTACCCAAGACATGACGATAACCCAGATCTTTCAGCCTGAAACTCAGTCCGTTATGATCTATTTGGTTCCACAGCAGTTGGAAAGAATCatttttaaagtgtttttttttgtttgtattatgtGTACCATAAAATGATAGAGATTTTCATTCCACAATGTCATTTAAACATAAAATAAAAGGGGATCAAAATAACTGTTTCTGTT
>XM_036959499.1
TTTACCGAGTTAATACACTCATTCTGTTCTCTATCAGCTACGGGTCTGGTACAGGTTTGACAGCTAGCCAACCGATAGGCTGTCACAACCTAATCAACCTGCTTATAGCCAACCAATAGGCTGTCACAACCAACCTGCTTATCCTCGGGTCAATCTAAGCTGTTTCTGAGAAGAGTCTCGTCTCAGTGCTAGGAGACAGTCCAGTGGGTGACACCATAGGAGACGTGCGGTCGGAGAGGGAAGCCAAAGAAGTAGTACCTTTTGGATGATTGAAGTGGACTAACATACTTTTGTTGATTTGTATCtgatattattgttgttgttttctcctCTGGACTCTTTTCATGGTTGTTGCCGAACGCAGTCAAGACAGAGCcgACGTGATGCCAATCACCAAATCAACCAAGAAGAAGAAATGGAAGAAGGAAGCCGGTGATGTGGAGGACCCAGAAGGCAGCCCTCCAGAGCCAGGTATTGAGATGGAGGTACTGGCCAGTAGGAGGCAGTCAGAGACGATCCCTCTGACCCCTGAACCACAGGAAGTTCCACcacagaagaggaagaagaaaaagaaagctCAGACCCAAGACATGGAGGAGCCGGAGCTGGTGAATGGGGATGGGATGGACCAGCACACGGACGGGGAGGAACAAGCCGTCACCAGGACAAAAACCAAGAGGAAGAAGAAGTCCAAGATTGACATGCATTACGCCAATGACCTGGGTGTGGAGGAAGGTGACATCGTCAGTGGTTTGCACCATGCTATCCCCCAGCATTCCCTGTTTTCTTCTCCTCTGGGCCACAGCCAGCCTGTCGGCAAAGTGTTTGTGGAGAGAAACAAGCGTTTCCAGGCGACTGACCCGCCCAAACACAATGCACATCTACCTGACCACATGGAGGATTACATGGAGGTCAGACCCCTCTGGACGACCAGGGACGTAGCTATGAGAGTACACAGTGGCTTCAGagtGATAGGTCTGTTTTCCCATGGCTTCCTGGCTGGCTATGCAGTGTGGAACACTGTGGTGGTGTATGTTTTGGCTGGGGAGCAGTTCACCACCCTACCTAACCTGCTACAGCAGTACCACTCCTTGGCCTACCCTGCTCAGTCTCTCCTCTACCTACTGTTGGCTATCAGCACAGTGTCTGCCTTCGACAGGGTGAACCTGGCGAAGGCCTCCATGGCTCTAAGAGGATTCCTCACTCTGGACCCGGCCGCTCTGGCCTCCTTCTTGTACTTTACAGCGCTCATCCTGTCCCTCAGTCAGCAGATGACCAGCGATCGTATCAACCTCTACCCCACTGCCAACGAGACCCTGTGgcccCCTGGTTCAGAGCACCAAATCCTCCAGCCCTGGATAGTGGTCAACCTGGTGATAGCCCTGTTAGTGGGTCTGGCCTGGGCCTTCGTCTCAACGCGACCAGACATGGACTACACCGAAGAGTTTTTAATGGCGATGGCAGTTGAAGACCTCTACCCAAGACATGACGATAACCCAGATCTTTCAGCCTGAAACTCAGTCCGTTATGATCTATTTGGTTCCACAGCAGTTGGAAAGAATCatttttaaagtgtttttttttgtttgtattatgtGTACCATAAAATGATAGAGATTTTCATTCCACAATGTCATTTAAACATAAAATAAAAGGGGATCAAAATAACTGTTTCTGTT

Function

NR:

description
transmembrane protein 237A-like

GO:

id name namespace
GO:0060027 convergent extension involved in gastrulation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036959498.1 False 1703 mRNA 0.50 11 50720697 50753131
XM_036959499.1 True 1679 mRNA 0.50 11 50720697 50753131

Neighbor

gene id symbol gene type direction distance location
LOC118943619 NA coding downstream 186949 50521227 ~ 50533748 (-)
cd28 LOC100136275 coding downstream 223843 50495067 ~ 50496991 (-)
si:ch211-67e16.3 LOC106582540 coding downstream 236027 50471747 ~ 50484670 (-)
si:ch211-67e16.4 LOC106582542 coding downstream 255017 50460094 ~ 50465680 (-)
prkag3b LOC106592041 coding downstream 476752 50122888 ~ 50243945 (-)
LOC110502197 LOC106582575 coding upstream 50520 50803651 ~ 50853194 (-)
als2a NA coding upstream 119324 50872455 ~ 50960735 (-)
LOC118943621 NA coding upstream 284333 51037464 ~ 51041332 (-)
sumo-1 sumo-1 coding upstream 288587 51041718 ~ 51052960 (-)
LOC118943622 NA coding upstream 301833 51054964 ~ 51057512 (-)
G1819911 NA non-coding downstream 147896 50570853 ~ 50572801 (-)
G1819894 NA non-coding downstream 210719 50507517 ~ 50509978 (-)
G1819893 NA non-coding downstream 217056 50499771 ~ 50503641 (-)
G1819975 NA non-coding upstream 4497 50757628 ~ 50758387 (-)
G1819976 NA non-coding upstream 8093 50761224 ~ 50798171 (-)
G1819981 NA non-coding upstream 31839 50784970 ~ 50788056 (-)
G1819986 NA non-coding upstream 61354 50814485 ~ 50814841 (-)
G1819993 NA non-coding upstream 67579 50820710 ~ 50822135 (-)
G1819250 NA other downstream 415659 50301801 ~ 50305038 (-)
G1819189 NA other downstream 506811 50137937 ~ 50219233 (-)
G1818802 NA other downstream 1001319 49717632 ~ 49719378 (-)
G1820012 NA other upstream 143441 50896572 ~ 50897153 (-)
G1820053 LOC106582548 other upstream 270307 51023438 ~ 51026181 (-)
carf LOC106582551 other upstream 329858 51059254 ~ 51085922 (-)
G1820212 NA other upstream 673272 51426403 ~ 51427042 (-)
LOC110501977 LOC106562996 other upstream 748727 51501853 ~ 51504398 (-)

Expression


Co-expression Network