XLOC_003701 (asb14a)


Basic Information

Item Value
gene id XLOC_003701
gene name asb14a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 42585138 ~ 42599018 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007167
AGGAGATCCGTCTCATATTATCTGTGTCAGTGCGATGGATGTGGACGTGGACACATCCGGAGGGATTTCAGACGAGGATGTGGCCATGCAGATGATGATTGAACAGAGTCTCCAGCAGAGCCACAAACCAACACAGTTGAAGAGCTACAGCGGAGACGCCTGCAGGATTGTTCAGATTTCGCCTGAGAGAGAGAAGATTTTCAATGCAATAAAATACGGTGATGAATTCTCTCTGCGTAAACTGACGGTCCACCAACGCTGTTTCTCTGAGGAAGACTCTACAGGCTTCATCCCTTTACACGACGCCGCCATTCAGAGCAACCCGAACATTCTGCAGATCACCTTCAACGCGTCTCCTGAAGACGCGAAGCACAGAAAGACTCGTCGTGGGAAAACGGCGCTCTTCTTAGCAGTAGAGAACGGGCTTCTGGACAATACTTTCTTCCTGCTGGATCACGGCTGCAGTCCAGACACGCTGGATAAAGAGGAGGACTCGCCTCTCATTGTAGCCATCAGAAACAATCAGCTTGAGATGGTGGATCTGCTGCTGAGGTTTGGAGCGCGTGTGAATCAGGAGTGTGTGAACCGCAGGACAGCTCTCCATGAGGCTGCCCGACTGGGTCTGACGGAGATTCTGGATCTGCTGATGAAGAACGGAGCTCACGCTGATCCTCGCAGCTCTTTCGGCCTCACACCGCTGGCTTTAGCAGCACAGGCCGGATACCTGGACATCATGAGGACACTAATACACAGAGGTGCTGATGTGGAGTCTCAGGCTCAGGATTGCGCAACCATCTTGTTTGAGGCTTGCATTTCAGGAAACCCTGACGTGATTTCATTACTGCTGAAGTCCGGCGCAGACGCAAACGTCCCCAAACACACGGGACACCTGCCCATCCACAGAGTAGCTCACCGCGGACACCTCAAGGCCCTCGCTCTCCTGATCCCCGTCACATCGTGGGATGCAGTGGACGACAGCGGCATCAGTCCTCTTCATTCAGCCGCCGCCGGTGGACACACACACTGTCTGGAGATGCTCCTCAATGCCGGATACGACCCAAATTTCATGCTCCACCCATGGGTCCGGCGCAGCTACGATGATAAGCGTCAGTCGGCACTGTATTTCGCCGTTTCAAACGATGATGTCTCCTCTGCAAGAGTCCTTCTAGAGGCCGGAGCCATGCCCAACCAGGACCCGGTCAAATGTCTGCAGGTGGCGCTGCGTCTGGGTAACCACGAGCTGATTCAGCTACTGCTGCGATACGGTGCCAATGTAAATTATTTCTGCCGGGTGAACACCACACACTTCCCCTCGGCGCTGCAGTACGCGCTGAAGGATGAGCTGGTGCTGCGGATGCTGTGTAATTTTGGCTATGATGTGGAGCGATGCTTCGACTGTCCGTATGGAGAAGGGTCGCATGTGCCATGCGGATATGAGGGCTGGACTGATACCGTCATCAAAGACACTCTGTTTTGTGAGGTGATTTCGGTCTCCTTTTTGAAGCATCTCTCGGGGAGTGTCGTGCGCATCATGATGGATTACGTGGATCATGTGAAATTCTGCTCCAAATTGAAGGCTGTGCTCATGGAGCAAAGACAGTGGGCTGAGATCTGCCACTTTCAAG
>TCONS_00007168
tttttaatttatttattgttaatgatTGTCATTGAAGGATTTAATATTTAAGGCTGGCTTTCTGCTTGTTTGAGTCTCTCACTCTCTGCATTATTCAGCCATCAGAAACAATCAGCTTGAGATGGTGGATCTGCTGCTGAGGTTTGGAGCGCGTGTGAATCAGGAGTGTGTGAACCGCAGGACAGCTCTCCATGAGGCTGCCCGACTGGGTCTGACGGAGATTCTGGATCTGCTGATGAAGAACGGAGCTCACGCTGATCCTCGCAGCTCTTTCGGCCTCACACCGCTGGCTTTAGCAGCACAGGCCGGATACCTGGACATCATGAGGACACTAATACACAGAGGTGCTGATGTGGAGTCTCAGGCTCAGGATTGCGCAACCATCTTGTTTGAGGCTTGCATTTCAGGAAACCCTGACGTGATTTCATTACTGCTGAAGTCCGGCGCAGACGCAAACGTCCCCAAACACACGGGACACCTGCCCATCCACAGAGTAGCTCACCGCGGACACCTCAAGGCCCTCGCTCTCCTGATCCCCGTCACATCGTGGGATGCAGTGGACGACAGCGGCATCAGTCCTCTTCATTCAGCCGCCGCCGGTGGACACACACACTGTCTGGAGATGCTCCTCAATGCCGGATACGACCCAAATTTCATGCTCCACCCATGGGTCCGGCGCAGCTACGATGATAAGCGTCAGTCGGCACTGTATTTCGCCGTTTCAAACGATGATGTCTCCTCTGCAAGAGTCCTTCTAGAGGCCGGAGCCATGCCCAACCAGGACCCGGTCAAATGTCTGCAGGTGGCGCTGCGTCTGGGTAACCACGAGCTGATTCAGCTACTGCTGCGATACGGTGCCAATGTAAATTATTTCTGCCGGGTGAACACCACACACTTCCCCTCGGCGCTGCAGTACGCGCTGAAGGATGAGCTGGTGCTGCGGATGCTGTGTAATTTTGGCTATGATGTGGAGCGATGCTTCGACTGTCCGTATGGAGAAGGGTCGCATGTGCCATGCGGATATGAGGGCTGGACTGATACCGTCATCAAAGACACTCTGTTTTGTGAGGTGATTTCGGTCTCCTTTTTGAAGCATCTCTCGGGGAGTGTCGTGCGCATCATGATGGATTACGTGGATCATGTGAAATTCTGCTCCAAATTGAAGGCTGTGCTCATGGAGCAAAGACAGTGGGCTGAGATCTGCCACTTTCAAGAGAATGTGCGATGTCTGCAGCATCTCTGTCGGCTGAAGATCAGGGCTTGTTTGGGTCGACTGCGTTTAAGAGCTCccattttcatgagttttcttcCACTGCCGGAGAGACTGAAACATTACATCCAGTACAGGGAATATGATCTGTACGGTCAGAAATGCCAAACGCAGAGCAAATGAGCCAGAGCAACACACATAATCACGGCTGTCCACTATATatacatgtttattattaacatatatTGACAGTGTCTTAAGGAGGACCTTATGGCTCTTTGTTCAaggtgtaaaataagtctctgatgactctcagaaataaaggtatgtgagctgtcactgggacgGTACCTTTTCAATAGGTACAAATGTAAACTTAAATGGtcaatattggtacctcaaaagtatatattagtacttataaatttaagaggaacacttttgtagtttttaggtactaatatgtacccttgagatgTTAAAATGGACCTTttatgtacaaatttgtaccttttgaaaaggtaccaccccagtgacagctcgtatacctttatttctgagagtgtagtttgtaatttcagctcaaaatactacactaataatgttttatacctctttgaaactgacccttttagggttcgatcctaattgtggcgttttagtgactgccgctttaaattcaaatgagattgagctctttttcaaaagagggcggagctacaaatgcctatatgtcagcatagtagcagattcaaaaacaagactaatgttctATGCCAATGAGGGATGGATggccactagtgggcggggctttcctcctctgatgacacgtacaaatagagaatgtcaatcaaagtgtttctgcagtgtgtttttatcaagtctgattataaacaacagaattaatacatttttaccattagaaacgGGCTATggtcacacactgctgccacacaactgggtttaaaccctttattaaagggatttttgcataataggttcccGTTAATGCTTATGAATATGTATAGAACACAACTAATGAGATAAATACttgctattattaaa

Function

symbol description
asb14a Predicted to be involved in protein ubiquitination. Predicted to act upstream of or within intracellular signal transduction. Orthologous to human ASB14 (ankyrin repeat and SOCS box containing 14).

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0016567 protein ubiquitination biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-140106-2 Predicted to be involved in protein ubiquitination. Predicted to act upstream of or within intracellular signal transduction. Orthologous to human ASB14 (ankyrin repeat and SOCS box containing 14).

Ensembl:

ensembl_id ENSDARG00000008473

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007167 False 1625 mRNA 0.53 9 42585138 42596048
TCONS_00007168 True 2275 mRNA 0.46 6 42587900 42599018

Neighbor

gene id symbol gene type direction distance location
XLOC_003700 FP067440.1 coding upstream 12156 42572242 ~ 42572982 (+)
XLOC_003699 rps23 coding upstream 23923 42556395 ~ 42561215 (+)
XLOC_003698 arf4a coding upstream 82198 42494531 ~ 42502940 (+)
XLOC_003697 arf4a coding upstream 92478 42482920 ~ 42492660 (+)
XLOC_003696 zgc:110286 coding upstream 103321 42478184 ~ 42481817 (+)
XLOC_003702 hesx1 coding downstream 1713 42600731 ~ 42635440 (+)
XLOC_003703 LO017916.1 coding downstream 26353 42625371 ~ 42625487 (+)
XLOC_003704 il17rd coding downstream 42386 42641404 ~ 42722658 (+)
XLOC_003705 tdrd3 coding downstream 127694 42726712 ~ 42819730 (+)
XLOC_003706 zgc:194981 coding downstream 131621 42730639 ~ 42732440 (+)
XLOC_003369 CR854846.2 misc upstream 26462056 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 29873142 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 29890875 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 29899539 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 29905110 12679732 ~ 12680028 (+)
XLOC_003693 CU138553.1 non-coding upstream 166764 42305089 ~ 42418374 (+)
XLOC_003692 NA non-coding upstream 453231 42127415 ~ 42131907 (+)
XLOC_003691 NA non-coding upstream 486847 42098047 ~ 42098291 (+)
XLOC_003689 NA non-coding upstream 515474 42042559 ~ 42069664 (+)
XLOC_003707 NA non-coding downstream 240832 42839850 ~ 42883298 (+)
XLOC_003708 NA non-coding downstream 436540 43035558 ~ 43048021 (+)
XLOC_003709 CABZ01092982.1 non-coding downstream 445808 43044826 ~ 43044949 (+)
XLOC_003710 CABZ01080006.1 non-coding downstream 471865 43070883 ~ 43077341 (+)

Expression


Co-expression Network