XLOC_037017 (BX511082.1)


Basic Information

Item Value
gene id XLOC_037017
gene name BX511082.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 14291932 ~ 14297132 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072874
gcATGTAAACATTTATCCAAGCATTCCGTTTTGcacgtcattaaacttgcgacaatgtggtattTCTATGCGGTTTAATGACatagaaggaagagcgtgtgtggagacgtTGACACGGTAAACAACAActgtcacggtttatggatctgtgtgttcctcctgtatgttatgtatcatgccttgtgtgttgtcatgtgtgagggtgtgtgtttgtttaccttttgtgttgacagcgtgctaggatcagctgatgtcatcagctgacttatcatcctccagctgaacctcatttggctggctataaaattcctcctgtggtatgtgctggttatcagtccgttgttgtCCTTGTTTGTCCTTGTTCCTGACTGTTGTCTCCCGGTATCATCCGCTGTCTGTTTGATGTCATCGCTGTGGTCAGTGGCTCTCTTTTGTTTGAACTTTCGTGTGTCCTTTGTTCATTAAAACACTCGCATTTGGATCCTCCTTGTCTTGATTCGTGACAGAACGGACTGATCaaacatggatccagcgagtgtcTCCGGTCTGGCTGAGGTTGTTGCACACGCTACCACACGCATGAACAGACATGATGATCAGATGGTCACCATCAGTTGCGCTGTCCAGGCGCTGGTCACTCAGATCTCTGATCTCACAACACGGTTGCAACGTCTTCATGCTGTCGGTCTTCAGCAGCCTGTTGCAGCTAACCTTAGCCCATCTATGCCGGTTCCTGAGCGAACAGCTGGATTTTCCGAGCCTCGCCTTCCACCTCCAGCGTTCTACTCCGGAGAGCCTGAGTTTTGTCGAGCCTTTTTAGCGAAGTGCTCATTGTACTTTTCCCTGCAGCCTTCCTCGTTTTCCACGGAGGAATCGAAAGTGGCGTTTGTCATCACGCTTCTCACCGGGAGAGCGGCGCAGTGGGGAACTGCTGTGTGGGAGAGGAAACTCCCATGCTGCTCTTCATTTGACACCTTTTCGACAGAGCTTAAAAAGGTATTCGATCGAGGTTTGGCGGGCAGAGAGGCGGCACGGGCGCTAACAGAATTGCAGCAGGGGCAACGGAGTGTCGCTGACTACTCCATTGAGTTCCGCACCCTGGCGGCCGAGAGCGAATGGAACGCGCAGGCGCAGTGGGACGTCTTTCTCCATGGGTTGGCAGACCAGATAAAGGATAAAATATTCGCTCTGGATCTTCCTAAAACCCTCGACGAACTCATTGATCTGGCCATTCGTGTGGATTCTCGTCTTCAGCTCAGGGAGAGAAACACGCGACGCACGCACGCTCTGGTGAGATCACCTTTTCCGGCTGTCACGGTAGTTCCGGGGCAGGAGGCCACGCCCCTCGCGGATCCCGAAGGCATGCAGATGGGCCGCTCTAGGCTGTCGCTGGAGGAAAAGCGCAGACGCCGCAGCAAGGACCTGGTGTTTCACAGCGGTGGTGTTGATCACATCGCGATTGAGGGTAAAAGCCAGAGCCCGTCAGTAGAAAAGAGTTTACTGACGGGTGGAGTATCTTTGAACAAATCTTCCCTTGCAGCTACTCTTTTGAATGTTATGTTGGAGTGGTCATCTGGCAATTTTAGTACTCAAGCAATTATTGACTCTGGGGCGGAGGGAAATTTTATTGACTCTGCTTTAGTAAAAAAACTCAGACTTCCTGTGATTTCTCTCTCCCAACCTATATCTGTTCATGCTCTTAATGGTTCTTCTCTTCCGTCCATTACTCATTCAACTGGTCCAATAAGACTGATCACCTCTGGTAACCACtctgaaattattcatttttttttaacagaagctCCTGTCACTCCAGTAGTCCTTGGGCATCCTTGGCTGGTAATACACAATCCACATATTAACTGGAGACAGGAATCTGTAATATCTTGGAGTGAGAGCTGTCATGCTACGTGTTTGTTGTCTGCCTGTTCTTCTGTGTCTCGTTCTGTTTTTCAGGAAGAACacatggatctgtcaaacgtgcccaaggagtacctcgacctgaagagagtgttcagtaagtctcgagctgcttctctgcctccacatcgtccctatgactgtgctatagagttattgccaggtacgtctccgcctaaaggcaaactttattcgctctctgttccagagagggaggccatggagaaatatatttctgattctctagcagccaagatcatccgccCTTCTTCATCACCAGCAGGGGCGgggtttttttttgtgaaaaagaaagaTGGCTCCCTCCGTCCTTGTATAGACTACCGAGGGCTGAACGCTATCACGGTAAAGAATAcatatcctttgccgctgatgtcttctgccTTCGAACGTCTGCAGGGGGCATCCTTTTTCACGAAATTAGACCTCCGCAATGCTTACCATTTGGTCCGCATTCGAGAAGGCGATGAATGGAAGACTGCCTTTAATACCCCCAGGGGGCactttgaatattgtgttcttcctttCGGTCTGTCCAACGCCCCTGCAGTCTTCCAAGCACTCGTGAATGACGTGTTGAGAGATATgctagatcagtttatttatgtttacctggatgacatactgatattttctcattctctccaggaacacgttcaacacgtcaggcgagtgcttcagaggctgctagagaatgggctttatgtcaaggcggagaaatgcgtttttcatgcacagtctgttccttttctgggacatatcgtgtcagtcgaggggatgcgcatggatccagagaaagttcaggctgtggtagattggccaaccccagattcccgcaaggccctgcagaggtttcttggttttgccaatttttaccggcgtttcaTTCGCaacttcagccagctcgccgcacctCTGACTGCCTTAACCTCCCTCAAGACTCCGTTCAGGTGGTCCAATGCAGCGCAAGTTGCGTTTGATCGTCTGAAAAGCTGCTTTGTTTCAGCACCTATTCTTATTGCCCCTGATCCATCACGGCAgttcgtggtggaggttgacgcatcAGAGGTGGGGGTCGgtgctatcctgtcccagcgctcttCCTCGGACGGCAAGATGCATCCCTGCGCGTATTTTTCTCATCGTCTCAACAATGCTGAACAAAATTATGATATTGGTAATCGAGAGCTGTTGGCCGTCAAGCTTGCATTGGAAGAGTGGCGTCATTGGCtagagggttcgggggttccctttatcgtttggaccgatcataaaaatCTGGAGTACATCCAATCCGCCAAAAGATTGAACTCTAGGCAGGCGCGGTGGGCTttatttttcggacgtttcgATTTTTCCATCTCGTACCGACCAGGTTCCAAGAATGTTAAACCTGATGCACTTTCTCGAATTTTTGATCACTCTGAGCGCGCATCATCTCCTGAGACCATCGTGCCACGCAGACTTTTTATCTCTGCTGTCACCTGGGAGATCGAGTCGAGGGTCCGCATGGCCTTAGAAGGGGTAACGCCTCCGCCTGGATGCCCACCGAGTCGTTTATTTGTGCCAGAGGAATTACGGTCTGACGTCATCCGTTGGGGTCACTCTTCCAAGTTGGCCTGTCATCCAGGGGTGAGTCGTACCTTGTATCTAATCAAacaacgattctggtggccagttATGGCTCGTGACATAAGGAATTTTGTGTTGGCTTGCtcagtttgtgctgtttctaagacttccaaTCGCCCCCCCGCTGGACttcttcagccgctgtcagtgccatCGAGACCCTGGTCCCATATTGCGCTAGATTTCGTTACGGGTCTTCCCCCCTCCAACGGGAATACGGTGATTTTGACCGTAGTGGACCGGTTTTCGAAAGCCACTCActttattcctctgcccaaattaccatcagccagagagacagcggctgCTGTCATTGACCATGTCTTTcgtattcatggcctcccgacggatgtggtttctgacagggggcctcagttcatctctaaattttggagagagttttgtcatttaatgggggcgactgttagtctttcttctggtttccatcctcagagtaacggtcAAACGGAGAGAGCCAACCAAGATCTTGAACGCATGTTACGATGTTTAGTCTCTCAGAATCCATCCTCCTGGAGCCAGCAGCTCTCATGGGTTGAGTACGCACATAACTCATTACCAGTGTCTGCCACGGGCCTCTCTCCATTTGAGTGTAGTTTAGGGTACCAGCCACctgcttttcccagtctggaatccgaagtcgcggttccctctgcccacgcctttgtccagaggtgtcgacgtacttggaatagggccagacagaccctccttcaAGTAGGtttgcgcaccaaggctaaagccgatcgccaccggtctaagcctcccgtttacgttgtcggtcaaaaagtgtggctttcatctAAAAATATTCCTCTCCGCACCGTATGTAacaaacttgcacctaaattcattggcccgttttctgtcaccaagatcattagtccggtggcagtccgcctcaaacttcctccagcgtacaggagaattcatcccgtttTTCATGTCTCTAAAttgaagcccgtttttcatacggccattaatccgcccactccggttccccccccgccgcgtctcgtagaagGGGAGAcggtttattcggttaagcgcattctggactcgagacggaggggacgaggattccagtacttggtggactgggagggttacggtccagaggagaggagttgggttccTGCAAGGGACATATTGGATCATTCtctcatcgatgattacaatcgccaggtaaacTCTTCTGGGAGCGCCAAGAGGCGCTCTTAGGAGAGAGGGTActgtcacggtttatggatctgtgtgttcctcctgtatgttatgtatcatgccttgtgtgttgtcatgtgtgagggtgtgtgtttgtttaccttttgtgttgacagcgtgctaggatcagctgatgtcatcagctgacttatcatcctccagctgaacctcatttggctggctataaaattcctcctgtggtatgtgctggttatcagtccgttgttgtCCTTGTTTGTCCTTGTTCCTGACTGTTGTCTCCCGGTATCATCCGCTGTCTGTTTGATGTCATCGCTGTGGTCAGTGGCTCTCTTTTGTTTGAACTTTCGTGTGTCCTTTGTTCATTAAAACACTCGCATTTGGATCCTCCTTGTCTTGATTCgtgacaacaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000113678

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072874 True 5201 mRNA 0.50 1 14291932 14297132

Neighbor

gene id symbol gene type direction distance location
XLOC_037016 NA coding upstream 94429 14152168 ~ 14197503 (+)
XLOC_037015 AL929266.1 coding upstream 144779 14143073 ~ 14147153 (+)
XLOC_037014 NA coding upstream 174932 14112475 ~ 14117000 (+)
XLOC_037013 si:ch211-67e16.4 coding upstream 250645 14023386 ~ 14041287 (+)
XLOC_037012 si:ch211-67e16.3 coding upstream 272542 14010823 ~ 14019390 (+)
XLOC_037018 NA coding downstream 1220401 15517533 ~ 15530690 (+)
XLOC_037019 NA coding downstream 1230479 15527611 ~ 15529457 (+)
XLOC_037020 CR513782.1 coding downstream 1270232 15567364 ~ 15571007 (+)
XLOC_037021 znfl1b coding downstream 1540266 15837398 ~ 15841997 (+)
XLOC_037022 si:dkey-14o1.20 coding downstream 1593426 15890558 ~ 15894501 (+)
XLOC_037005 NA non-coding upstream 820405 13469074 ~ 13471527 (+)
XLOC_037004 CR407547.1 non-coding upstream 843284 13448529 ~ 13448648 (+)
XLOC_037023 NA non-coding downstream 1604394 15901526 ~ 15906907 (+)
XLOC_037024 BX469925.2 non-coding downstream 1609901 15907033 ~ 15907820 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G420655 NA non-coding CI01000304 null 4620122 ~ 4620710 (+)