Gene
RNA
| Item | Value |
|---|---|
| gene id | G1762328 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 600327 ~ 644372 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2018969 | True | 911 | lncRNA | 0.39 | 4 | 600327 | 644372 |
570,000
580,000
590,000
600,000
610,000
620,000
630,000
640,000
650,000
660,000
NC_048586.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fbxl3a | fbxl3 | coding | upstream | 4747 | 582486 ~ 595580 (+) |
| mycbp2 | NA | coding | upstream | 32899 | 273113 ~ 567428 (+) |
| trnat-cgu-77 | NA | coding | upstream | 432310 | 167946 ~ 168017 (+) |
| trnaa-ugc-172 | NA | coding | upstream | 432853 | 167403 ~ 167474 (+) |
| trnat-cgu-76 | NA | coding | upstream | 434291 | 165965 ~ 166036 (+) |
| kctd12.1 | kctd12 | coding | downstream | 2328 | 646700 ~ 648290 (+) |
| commd6 | comd6 | coding | downstream | 236761 | 881133 ~ 887974 (+) |
| tbc1d4 | tbc1d4 | coding | downstream | 257701 | 902073 ~ 1041922 (+) |
| klf12b | klf12 | coding | downstream | 601068 | 1245440 ~ 1412460 (+) |
| dachd | dach1 | coding | downstream | 959101 | 1603473 ~ 1937757 (+) |
| G1762504 | NA | non-coding | upstream | 10823 | 589117 ~ 589504 (+) |
| G1762427 | NA | non-coding | upstream | 165657 | 434466 ~ 434670 (+) |
| G1762422 | NA | non-coding | upstream | 170836 | 429255 ~ 429491 (+) |
| G1762420 | NA | non-coding | upstream | 174099 | 425717 ~ 426228 (+) |
| G1762419 | NA | non-coding | upstream | 174888 | 425205 ~ 425439 (+) |
| G1762526 | NA | non-coding | downstream | 4223 | 648595 ~ 667748 (+) |
| G1762573 | NA | non-coding | downstream | 100198 | 744570 ~ 746914 (+) |
| G1762577 | lmo7 | non-coding | downstream | 108549 | 752921 ~ 753216 (+) |
| G1762578 | NA | non-coding | downstream | 109400 | 753772 ~ 755508 (+) |
| G1762585 | lmo7 | non-coding | downstream | 120790 | 765162 ~ 777464 (+) |
| G1762567 | NA | other | downstream | 73150 | 717522 ~ 722130 (+) |
| G1764378 | ebi2 | other | downstream | 1371737 | 2016109 ~ 2028403 (+) |
| G1764876 | NA | other | downstream | 1796701 | 2441073 ~ 2442508 (+) |
| ppp2r3b | LOC106581654 | other | downstream | 3913669 | 4501681 ~ 4562208 (+) |
