Gene
RNA
| Item | Value |
|---|---|
| gene id | G1763825 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 1589916 ~ 1590136 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2020580 | True | 221 | lncRNA | 0.36 | 1 | 1589916 | 1590136 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943628 | NA | coding | downstream | 57942 | 1525947 ~ 1531974 (-) |
| klf5b | LOC106586047 | coding | downstream | 161890 | 1420358 ~ 1428026 (-) |
| uchl3 | uchl3 | coding | downstream | 718431 | 858239 ~ 871485 (-) |
| LOC110501241 | lmo7 | coding | downstream | 736658 | 715056 ~ 853258 (-) |
| acod1 | acod1 | coding | downstream | 967976 | 617941 ~ 621940 (-) |
| gpr18 | gpr18 | coding | upstream | 417818 | 2007954 ~ 2013062 (-) |
| gpr183a | ebi2 | coding | upstream | 425932 | 2016068 ~ 2042770 (-) |
| LOC110501251 | NA | coding | upstream | 852323 | 2442459 ~ 2466932 (-) |
| zic5 | zic5 | coding | upstream | 893985 | 2484121 ~ 2489060 (-) |
| tmtc4 | tmtc4 | coding | upstream | 1309690 | 2899826 ~ 2950860 (-) |
| G1763818 | NA | non-coding | downstream | 6390 | 1583303 ~ 1583526 (-) |
| G1763816 | NA | non-coding | downstream | 26553 | 1562013 ~ 1563363 (-) |
| G1763791 | NA | non-coding | downstream | 34515 | 1555173 ~ 1555401 (-) |
| G1763790 | NA | non-coding | downstream | 39040 | 1550657 ~ 1550876 (-) |
| G1763785 | NA | non-coding | downstream | 40944 | 1548652 ~ 1548972 (-) |
| G1763827 | NA | non-coding | upstream | 4129 | 1594265 ~ 1594472 (-) |
| G1763833 | NA | non-coding | upstream | 8217 | 1598353 ~ 1598683 (-) |
| G1764138 | NA | non-coding | upstream | 105735 | 1695871 ~ 1727272 (-) |
| G1764164 | NA | non-coding | upstream | 140891 | 1731027 ~ 1731397 (-) |
| G1764278 | NA | non-coding | upstream | 295556 | 1885692 ~ 1885976 (-) |
| G1763459 | NA | other | downstream | 370199 | 1218802 ~ 1219717 (-) |
| G1762219 | LOC106593246 | other | downstream | 1484559 | 86357 ~ 105357 (-) |
| G1766126 | NA | other | upstream | 1735585 | 3325721 ~ 3326343 (-) |
| fgf14 | fgf14 | other | upstream | 1857295 | 3447431 ~ 3774567 (-) |
| G1769281 | NA | other | upstream | 4210625 | 5800761 ~ 5825307 (-) |
| G1769618 | NA | other | upstream | 4370014 | 5960150 ~ 5960815 (-) |
| G1771092 | NA | other | upstream | 5661648 | 7251784 ~ 7256717 (-) |
