XLOC_037028


Basic Information

Item Value
gene id XLOC_037028
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 16775987 ~ 16776615 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074888
cttaaatagattaaggctcattttggactacacttacattactttacaactgcttaatgcagtactgatgtatctagtagtttagtgggtttaactaatgtcacatctgtttttattcatttcagatgcagaaactTTTGACATATGAATTCATCTTGACTTAGGaactCTTCACAGCACTGCATCTGAACAGTCACAACCTCACAGAGCTGCACAACTGCCCCACTCAAAATCAGTGTTGAAGCTGGAACCTCATCTTGTGTACAGCAAAGGCAGAGCTGAAAATTCACTGTTTgtcttgtaaatgtaaaaaaatgatataaagggcctaaaatgggactgacgtgatcattgttttgatttctagataagtacttatggggctacacatgcagctgaagttagcttcattgagtaggacatttctttcagtatactcttaaagagattcacccaaaaaggaaaattctgtcattaatgactcatacttcacttgttccaaatatgtctgacttgctttcttcagttaaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074888 True 531 lncRNA 0.36 2 16775987 16776615
Loading

Neighbor

gene id symbol gene type direction distance location
XLOC_037027 epha3 coding upstream 157380 16449398 ~ 16618607 (+)
XLOC_037026 C9H3orf38 coding upstream 527889 16241656 ~ 16248098 (+)
XLOC_037025 BX323875.1 coding upstream 790190 15982344 ~ 15985797 (+)
XLOC_037024 BX469925.2 coding upstream 868167 15907033 ~ 15907820 (+)
XLOC_037023 NA coding upstream 869080 15901526 ~ 15906907 (+)
XLOC_037029 cln5 coding downstream 77506 16854121 ~ 16859169 (+)
XLOC_037030 NA coding downstream 449629 17226244 ~ 17227294 (+)
XLOC_037031 scel coding downstream 529547 17306162 ~ 17334658 (+)
XLOC_037032 NA coding downstream 560536 17337151 ~ 17343544 (+)
XLOC_037033 slain1a coding downstream 572130 17348745 ~ 17386456 (+)
XLOC_037020 CR513782.1 non-coding upstream 1204980 15567364 ~ 15571007 (+)
XLOC_037019 NA non-coding upstream 1246530 15527611 ~ 15529457 (+)
XLOC_037037 NA non-coding downstream 859766 17636381 ~ 17636674 (+)
XLOC_037038 AL929161.1 non-coding downstream 886335 17662950 ~ 17663065 (+)
XLOC_037042 BX248332.1 non-coding downstream 1387014 18163629 ~ 18164027 (+)
XLOC_037018 NA non-coding upstream 1245297 15517533 ~ 15530690 (+)

Expression

Expression of XLOC_037028 in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 6.
End of interactive chart.

Co-expression Network