Gene
RNA
| Item | Value |
|---|---|
| gene id | G1767142 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 4082423 ~ 4082648 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2024099 | True | 226 | lncRNA | 0.43 | 1 | 4082423 | 4082648 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fgf14 | fgf14 | coding | downstream | 307856 | 3447431 ~ 3774567 (-) |
| nalcn | nalcn | coding | downstream | 770383 | 3016850 ~ 3312040 (-) |
| LOC118943626 | NA | coding | downstream | 892129 | 3188097 ~ 3190294 (-) |
| tmtc4 | tmtc4 | coding | downstream | 1131563 | 2899826 ~ 2950860 (-) |
| zic5 | zic5 | coding | downstream | 1593363 | 2484121 ~ 2489060 (-) |
| shox | shox | coding | upstream | 199330 | 4281978 ~ 4294159 (-) |
| si:ch211-269e2.1 | LOC106581653 | coding | upstream | 479575 | 4562223 ~ 4609211 (-) |
| LOC110501266 | LOC106581655 | coding | upstream | 528248 | 4610896 ~ 4614658 (-) |
| LOC110501268 | cssa25h2orf47 | coding | upstream | 570833 | 4653481 ~ 4659691 (-) |
| LOC110501269 | LOC106581656 | coding | upstream | 592867 | 4675515 ~ 4756261 (-) |
| G1767119 | NA | non-coding | downstream | 16152 | 4066069 ~ 4066271 (-) |
| G1767110 | NA | non-coding | downstream | 19618 | 4062602 ~ 4062805 (-) |
| G1767105 | NA | non-coding | downstream | 21900 | 4060298 ~ 4060523 (-) |
| G1767093 | NA | non-coding | downstream | 29828 | 4052293 ~ 4052595 (-) |
| G1766991 | NA | non-coding | downstream | 114369 | 3967826 ~ 3968054 (-) |
| G1767161 | NA | non-coding | upstream | 14001 | 4096649 ~ 4096891 (-) |
| G1767189 | NA | non-coding | upstream | 34531 | 4117179 ~ 4117384 (-) |
| G1767190 | NA | non-coding | upstream | 36065 | 4118713 ~ 4118999 (-) |
| G1767216 | LOC106581475 | non-coding | upstream | 53475 | 4136123 ~ 4136372 (-) |
| G1767218 | NA | non-coding | upstream | 54014 | 4136662 ~ 4136920 (-) |
| G1766126 | NA | other | downstream | 756080 | 3325721 ~ 3326343 (-) |
| klf5b | LOC106586047 | other | downstream | 2654703 | 1420358 ~ 1428026 (-) |
| G1763459 | NA | other | downstream | 2862706 | 1218802 ~ 1219717 (-) |
| G1762219 | LOC106593246 | other | downstream | 3977066 | 86357 ~ 105357 (-) |
| G1769281 | NA | other | upstream | 1718113 | 5800761 ~ 5825307 (-) |
| G1769618 | NA | other | upstream | 1877502 | 5960150 ~ 5960815 (-) |
| G1771092 | NA | other | upstream | 3169136 | 7251784 ~ 7256717 (-) |
| G1771426 | LOC106582012 | other | upstream | 3379565 | 7462213 ~ 7464692 (-) |
| LOC110501323 | LOC106581977 | other | upstream | 4542374 | 8624815 ~ 8684792 (-) |
