Gene
RNA
| Item | Value |
|---|---|
| gene id | G1768106 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 4758867 ~ 4824894 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2025162 | True | 277 | lncRNA | 0.50 | 2 | 4758867 | 4824894 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501269 | LOC106581656 | coding | downstream | 2606 | 4675515 ~ 4756261 (-) |
| LOC110501268 | cssa25h2orf47 | coding | downstream | 99176 | 4653481 ~ 4659691 (-) |
| LOC110501266 | LOC106581655 | coding | downstream | 144209 | 4610896 ~ 4614658 (-) |
| si:ch211-269e2.1 | LOC106581653 | coding | downstream | 149656 | 4562223 ~ 4609211 (-) |
| shox | shox | coding | downstream | 464708 | 4281978 ~ 4294159 (-) |
| LOC110501278 | LOC106581673 | coding | upstream | 352893 | 5177787 ~ 5195340 (-) |
| trim63b | LOC100505419 | coding | upstream | 359955 | 5184849 ~ 5186616 (-) |
| lrrc3 | LOC106581660 | coding | upstream | 399668 | 5224562 ~ 5226359 (-) |
| pcbp3 | LOC106581674 | coding | upstream | 419507 | 5244401 ~ 5417899 (-) |
| LOC110501280 | LOC106581675 | coding | upstream | 612143 | 5437037 ~ 5612283 (-) |
| G1767972 | NA | non-coding | downstream | 284783 | 4472290 ~ 4474084 (-) |
| G1767621 | NA | non-coding | downstream | 315593 | 4443034 ~ 4443274 (-) |
| G1767589 | NA | non-coding | downstream | 345033 | 4413432 ~ 4413834 (-) |
| G1767442 | NA | non-coding | downstream | 445254 | 4313365 ~ 4313613 (-) |
| G1767440 | NA | non-coding | downstream | 447666 | 4310744 ~ 4311201 (-) |
| G1768198 | NA | non-coding | upstream | 83420 | 4908314 ~ 4935666 (-) |
| G1768230 | NA | non-coding | upstream | 124495 | 4949389 ~ 4950484 (-) |
| G1768237 | NA | non-coding | upstream | 132081 | 4956975 ~ 4957225 (-) |
| G1768402 | NA | non-coding | upstream | 203855 | 5028749 ~ 5031511 (-) |
| G1768437 | NA | non-coding | upstream | 251704 | 5076598 ~ 5079315 (-) |
| fgf14 | fgf14 | other | downstream | 984858 | 3447431 ~ 3774567 (-) |
| G1766126 | NA | other | downstream | 1432524 | 3325721 ~ 3326343 (-) |
| klf5b | LOC106586047 | other | downstream | 3331147 | 1420358 ~ 1428026 (-) |
| G1763459 | NA | other | downstream | 3539150 | 1218802 ~ 1219717 (-) |
| G1762219 | LOC106593246 | other | downstream | 4653510 | 86357 ~ 105357 (-) |
| G1769281 | NA | other | upstream | 975867 | 5800761 ~ 5825307 (-) |
| G1769618 | NA | other | upstream | 1135256 | 5960150 ~ 5960815 (-) |
| G1771092 | NA | other | upstream | 2426890 | 7251784 ~ 7256717 (-) |
| G1771426 | LOC106582012 | other | upstream | 2637319 | 7462213 ~ 7464692 (-) |
| LOC110501323 | LOC106581977 | other | upstream | 3800128 | 8624815 ~ 8684792 (-) |
