G1768256


Basic Information

Item Value
gene id G1768256
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 4973812 ~ 5032570 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2025323
aaaaaagtttgaaatattcaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcacaaggcactgtacataacATATTTCTATCTACATATTTCTATCCTGCTGAACGAGCCCCAGGTtgttagctatagctagctaatgaggtaacatgactgaacaaggtGTAGCCTAATGGGCTGGTCCGTAAGTAGCCTAGTTTTAGTACGGCCCGTGATATGCTTTATGAATGTAAAATGCGACCAAAATCTATAGTTAGATTGAAGACATTTTCTCTGAGGACAGATGGAGACTAGGCTAGTACGTTGGCTACAGAACCTGTCTACAAAATACAACGGGGAAAGTGCGAGGGTTGAGCGAGATTACAAATTCAAAAAGGGGAGAAAAACATAGCTAGACGGTTGTTTTACTATTAAACTTAAAGCTACATTACtagtatgtaactttttgggtgaccaggcCAGATTcccatagaaatgtgagttattgaTCTTTCGTTCATGTTGAAAGCAAGTCTATGAAGCAGTAGATCTGTGTGTGCGATTTTTATTCTTCCCGATCAGAAGTTTAGTTTTTTGCGTCTTATACTTTcgattttgtacaccagcttcaaacggTTGAATAGACAATATTTTTGCTTGTGGTAAATATATTCCACAGCGgattagatggtacaatgactgcttgttttgtcacataaactgaaattaggcaaactactAAACTATCAACAAGGAAATGTTGGAGTGATTTCTGCATGGTGCAtctttaatgttttttttattttgtaaagcaGCTTGTGTTTCTTAATAAGCAGGCACATTTTACTAGAAGACTGGTGATGACTGGATAGCTATGGGGAAGCAAGAGAGTTGCGTGCACGATGTGTATAATCAGAGGCAGAGCTGAAACGGAGCCTGTCTGCCCACACTCATCGCTTGCTCCCCTACAGTTCACCAGCTGATGTAGGCTAGGCTGTGTGTCGGATCCTTCCCTCTGCTGAACAGAACTGCACAGCGCATCTGTGCTGCTAATATTAATTGTGCTTATCACTGTAAAGCTCTCAATCTCTCCAAAAATGATTGTCCAGTTCATTTAATGGTCAGATTTTAGTCACAGAGATAATTTAGTCTCAACTCTTTTTttaataaaattaaataaaatcatTTTTGTTTAGTTATAGTTTTTTCTGGGTCTATTTAGTCAGTTATAGTCTAGTcaattgccactgaaaaataGGTGTGTTTGACTCATCCTGAAAAACATGAAAGGTCACTTTTTGCTCTCCACAATACGGTGCACTTATCTCAAATTGAAAGCTAATTTGAGCAATCTGATTATGTCAGTTAAGTGGTTATGAAGATAAAGTATGAGCCAAAAGTTGTAGAGGCACTAAACATCAGTTTTGAACTAAAAATGGGTTTCGTGGCAGAATGAATCAGAGACATGTTTGGGAACTGGTTTGTGAATGAAGGCAATAATTGTGCTTTTTTTCTATCCCACACTGTTTTATCTCTATATTCAGCTTGTTGTGTTTCTGGCTCATGATGACCTGTGCAATATGGAAATGAGTGTGCTCCATGTTTTTCTTTGTGCAGCTAGGCAGAGTGAAAGCCATAGTGATGACATGTTGGTCAGCTTAGCTGCCTCGGCAGAGACACTTCTCGGCAGAGACACTTCTCGGCACAGAAGTGGCTTTCGAGTGACCCTGAAAAAAAGACTTCAGCACATGAATGGAGAGCACAGCTTATAAGCCTTTTTCTCAGTATTTTTATTTGAAGTTGGAAGTGTTTGACCTTGTCTAGACAACTTTGTCTGCTTAGACTGGAGGCCTCAGAACACACTGTAGTTGTAGTATGTATTGTAGTTGAATACTGTACCTACTGATCACTAGTACCGGACAATAACAAATTAGACTTCTGTGAGATCGCATGTATAGCAAAAAGCATCAATCACAAAGCACTCATCTTTTCTGTTACCCATCACTACAGCGAATTCCTTTGAAATGAAAAACagcctctatctcaaggccatcagactgttaaatactcaccactaaccggcctccgcccagtaccctgccctaaaCTTTACTCACTGTTACTCACTGGCTACTACCCGGTACTGAAccttgcaccttagaggctgctgactatgtacagtgcattcggaaagtattgagacccc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2025323 True 2285 lncRNA 0.39 2 4973812 5032570
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110501273 LOC106581650 coding upstream 197914 4763021 ~ 4775898 (+)
ppp2r3b LOC106581654 coding upstream 411604 4501681 ~ 4562208 (+)
upf3a LOC106581644 coding upstream 1055333 3888821 ~ 3918479 (+)
cdc16 LOC106581643 coding upstream 1088453 3849985 ~ 3885359 (+)
itgbl1 itgbl1 coding upstream 1526947 3331567 ~ 3446865 (+)
LOC118943573 NA coding downstream 159359 5191929 ~ 5197396 (+)
obsl1b LOC106581677 coding downstream 635642 5668212 ~ 5739785 (+)
LOC118943574 NA coding downstream 873592 5906162 ~ 5906899 (+)
LOC118943575 NA coding downstream 1091716 6124286 ~ 6128819 (+)
LOC110502039 LOC106581999 coding downstream 2301139 7333709 ~ 7339054 (+)
G1768251 NA non-coding upstream 6478 4966796 ~ 4967334 (+)
G1768241 NA non-coding upstream 13695 4959900 ~ 4960117 (+)
G1767641 NA non-coding upstream 413016 4454502 ~ 4560796 (+)
G1767627 NA non-coding upstream 526017 4447427 ~ 4447795 (+)
G1767625 NA non-coding upstream 527688 4445724 ~ 4446124 (+)
G1768299 NA non-coding downstream 14940 5047510 ~ 5052390 (+)
G1768353 NA non-coding downstream 143274 5175844 ~ 5176063 (+)
G1768355 NA non-coding downstream 144059 5176629 ~ 5176918 (+)
G1768356 NA non-coding downstream 145234 5177804 ~ 5178582 (+)
G1768499 NA non-coding downstream 173580 5206150 ~ 5206961 (+)
G1764876 NA other upstream 2531304 2441073 ~ 2442508 (+)
G1764378 ebi2 other upstream 2945409 2016109 ~ 2028403 (+)
klf12b klf12 other upstream 3632430 1245440 ~ 1412460 (+)
G1762567 NA other upstream 4251682 717522 ~ 722130 (+)
G1769230 NA other downstream 767945 5800515 ~ 5825298 (+)
G1769403 NA other downstream 903800 5936370 ~ 5936792 (+)
G1769461 NA other downstream 1024709 6057279 ~ 6057582 (+)
G1769469 NA other downstream 1028725 6061295 ~ 6061739 (+)
G1770757 NA other downstream 2202004 7234574 ~ 7282742 (+)

Expression

G1768256 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 3.
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G1768256 Expression in each Bioproject

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G1768256 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network