G1768499


Basic Information

Item Value
gene id G1768499
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 5206150 ~ 5206961 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2025591
ggtgtctgcagcattgtgacgtatttgtaggcatatcattggaagattgaccataagagactacatttaccaggtgcccgcttggtgtcctccgtcgaaattattgcgtaatctccagctgtgtgcatttttccatttggttcagaggagaaaccaaactgccacgaattatttatcatcaaatagatatgtgaaaaacaccttgaggattgattctaaacaacgtctgccatgtttctgtcgatattatggagttaatttggaaaaaagttgtaatgactgaattttctggtttttttcttagccaaacgtgatgatcaaaacggagcgatttctcctacacaaataatctttttggaaaaactgaacatttgctatctaactgagagtctcctcattgaaaacatccgaagttcttcaaaggtaaattattttatttgaatgcttttcttgtttttgtgaaaatgttgcctgctgaatgctaggcttaatgctatgctagctatcaatactcttacacaaatgcttgtgtagctatggttgaaaagcatattttgaaaatctgagatgacagtgttgttaacaaaaggctaagcttgtgagccaatatatttatttcatttcatttgcgattttcatgaatagttaacgttgcgttatgctaatgagcttgaggctatgattacgctcccggatacgggattgctcgagaAGTAAAAAAAACTACAGTATGTATGCAATAGTGCAATACTGACCGACCCTGCAATTACATCTGtgaccctgtgcatgtgactaataaactaTACAAGGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2025591 True 812 lncRNA 0.37 1 5206150 5206961
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118943573 NA coding upstream 8754 5191929 ~ 5197396 (+)
LOC110501275 LOC106581666 coding upstream 86438 5023900 ~ 5119712 (+)
LOC110501273 LOC106581650 coding upstream 430252 4763021 ~ 4775898 (+)
ppp2r3b LOC106581654 coding upstream 643942 4501681 ~ 4562208 (+)
upf3a LOC106581644 coding upstream 1287671 3888821 ~ 3918479 (+)
obsl1b LOC106581677 coding downstream 461251 5668212 ~ 5739785 (+)
LOC118943574 NA coding downstream 699201 5906162 ~ 5906899 (+)
LOC118943575 NA coding downstream 917325 6124286 ~ 6128819 (+)
LOC110502039 LOC106581999 coding downstream 2126748 7333709 ~ 7339054 (+)
LOC118936580 NA coding downstream 2186678 7393639 ~ 7417439 (+)
G1768356 NA non-coding upstream 27568 5177804 ~ 5178582 (+)
G1768355 NA non-coding upstream 29232 5176629 ~ 5176918 (+)
G1768353 NA non-coding upstream 30087 5175844 ~ 5176063 (+)
G1768299 NA non-coding upstream 153760 5047510 ~ 5052390 (+)
G1768256 NA non-coding upstream 173580 4973812 ~ 5032570 (+)
G1768501 NA non-coding downstream 1020 5207981 ~ 5208190 (+)
G1768506 NA non-coding downstream 3364 5210325 ~ 5210629 (+)
G1768514 NA non-coding downstream 10682 5217643 ~ 5217915 (+)
G1768515 NA non-coding downstream 11699 5218660 ~ 5218960 (+)
G1768520 NA non-coding downstream 16030 5222991 ~ 5223334 (+)
G1764876 NA other upstream 2763642 2441073 ~ 2442508 (+)
G1764378 ebi2 other upstream 3177747 2016109 ~ 2028403 (+)
klf12b klf12 other upstream 3864768 1245440 ~ 1412460 (+)
G1762567 NA other upstream 4484020 717522 ~ 722130 (+)
G1769230 NA other downstream 593554 5800515 ~ 5825298 (+)
G1769403 NA other downstream 729409 5936370 ~ 5936792 (+)
G1769461 NA other downstream 850318 6057279 ~ 6057582 (+)
G1769469 NA other downstream 854334 6061295 ~ 6061739 (+)
G1770757 NA other downstream 2027613 7234574 ~ 7282742 (+)

Expression

G1768499 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
End of interactive chart.

G1768499 Expression in each Bioproject

Bar chart with 18 bars.
G1768499 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
End of interactive chart.

Co-expression Network