XLOC_037045 (BX004817.2)


Basic Information

Item Value
gene id XLOC_037045
gene name BX004817.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 18350367 ~ 18350483 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072909
TGCCACAGTCAAATCACCCTGCAGCCTAacactggttactcactgaagctaagcagggctaagcCTGGTCAGTAGCTGAATGGGAGATCACATCGAAAAATAagattgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000114953

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072909 True 117 rRNA 0.47 1 18350367 18350483
Loading

Neighbor

gene id symbol gene type direction distance location
XLOC_037044 BX004817.1 coding upstream 33847 18316403 ~ 18316520 (+)
XLOC_037043 dnajc15 coding upstream 71787 18215940 ~ 18278580 (+)
XLOC_037042 BX248332.1 coding upstream 186340 18163629 ~ 18164027 (+)
XLOC_037041 tnfsf11 coding upstream 307069 18023288 ~ 18043298 (+)
XLOC_037040 akap11 coding upstream 343735 17971935 ~ 18006632 (+)
XLOC_037046 lacc1 coding downstream 222487 18572970 ~ 18587754 (+)
XLOC_037047 BX957328.1 coding downstream 254977 18605460 ~ 18608269 (+)
XLOC_037048 serp2 coding downstream 366002 18716485 ~ 18721416 (+)
XLOC_037049 gtf2f2b coding downstream 478877 18829360 ~ 18905317 (+)
XLOC_037050 NA coding downstream 561214 18911697 ~ 18914987 (+)
XLOC_037038 AL929161.1 non-coding upstream 687302 17662950 ~ 17663065 (+)
XLOC_037037 NA non-coding upstream 713693 17636381 ~ 17636674 (+)
XLOC_037032 NA non-coding upstream 1006823 17337151 ~ 17343544 (+)
XLOC_037053 NA non-coding downstream 878336 19228819 ~ 19229066 (+)
XLOC_037062 NA non-coding downstream 1444671 19795154 ~ 20053449 (+)
XLOC_037063 NA non-coding downstream 1447768 19798251 ~ 19810178 (+)

Expression

Expression of XLOC_037045(BX004817.2) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: -0.5 to 0.5.
End of interactive chart.

Expression of XLOC_037045(BX004817.2) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: -0.5 to 0.5.
End of interactive chart.

Co-expression Network