G1769283


Basic Information

Item Value
gene id G1769283
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 5803522 ~ 5804418 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2026427
ATGAAGTTGATTTAAGTATTTAAGCAGGATTCTTCTAGTTGAATTCCATGGTCAGGTATGAGATTGCTTTTATGGCTGCTTGTGTGTCATGTCAGAGTTTTGCATAAAATTATGAAATGTTTGATTTATTggatgaatgtatttcaattgattgTGAAGATAGTATTACCATTTAAAGGGAGAGGGTAACTATTGATGTATGAAGACCAATAAGTACTGAGCAATACACCTCCAGTACGTTGAGAAGTAAACTAGTTGCAAAATATTTTTGGAACGGAACAGCTTGCAAGGTTGATAATGATTAAGTTCAGAGTTTTGTACCTaaggcatatatataccttGAATGTGTTGCAGTGTCCCATGTCATGGATACTGAAAAATAAGTGTTTGCTTTGTAAGTTGACAATCAATATCGGCTTTGTTGTGCGATTTTTCAGGGGGGGACAACGACATTATGTTACTCGATTGTTTTTTGTGTGATTGTTTGattgtttgtttatttgattGCTTGGGTAATCACAATTGGTGCAGCTCTTAAACGTCTTTGCTCTGTGGAACCTCTGAATATGGCATGTGGTAGGCATGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2026427 True 588 lncRNA 0.36 2 5803522 5804418

Neighbor

gene id symbol gene type direction distance location
LOC110501282 LOC106581679 coding downstream 14854 5741280 ~ 5788668 (-)
LOC110501280 LOC106581675 coding downstream 191239 5437037 ~ 5612283 (-)
pcbp3 LOC106581674 coding downstream 385623 5244401 ~ 5417899 (-)
lrrc3 LOC106581660 coding downstream 577163 5224562 ~ 5226359 (-)
trim63b LOC100505419 coding downstream 616906 5184849 ~ 5186616 (-)
LOC110501283 LOC106581680 coding upstream 1195 5805613 ~ 5900386 (-)
LOC110501285 LOC106581661 coding upstream 159519 5963937 ~ 5968545 (-)
nabp1a LOC106581684 coding upstream 165996 5970414 ~ 5995011 (-)
trnas-cga-33 NA coding upstream 191148 5995566 ~ 5995647 (-)
LOC110502106 NA coding upstream 205413 6003661 ~ 6014297 (-)
G1769229 NA non-coding downstream 3415 5799846 ~ 5800107 (-)
G1769209 NA non-coding downstream 23954 5779364 ~ 5779568 (-)
G1769193 NA non-coding downstream 29141 5750137 ~ 5774381 (-)
G1769139 NA non-coding downstream 99431 5653229 ~ 5704091 (-)
G1768533 NA non-coding downstream 570600 5232542 ~ 5232922 (-)
G1769303 NA non-coding upstream 35098 5839516 ~ 5839723 (-)
G1769310 NA non-coding upstream 45151 5849569 ~ 5849845 (-)
G1769317 NA non-coding upstream 54841 5859259 ~ 5859532 (-)
G1769390 NA non-coding upstream 115953 5920371 ~ 5920591 (-)
G1769592 NA non-coding upstream 131969 5936387 ~ 5936686 (-)
fgf14 fgf14 other downstream 2029513 3447431 ~ 3774567 (-)
G1766126 NA other downstream 2477179 3325721 ~ 3326343 (-)
klf5b LOC106586047 other downstream 4375802 1420358 ~ 1428026 (-)
G1763459 NA other downstream 4583805 1218802 ~ 1219717 (-)
G1762219 LOC106593246 other downstream 5698165 86357 ~ 105357 (-)
G1769618 NA other upstream 155732 5960150 ~ 5960815 (-)
G1771092 NA other upstream 1447366 7251784 ~ 7256717 (-)
G1771426 LOC106582012 other upstream 1657795 7462213 ~ 7464692 (-)
LOC110501323 LOC106581977 other upstream 2820604 8624815 ~ 8684792 (-)
LOC110501325 LOC106581976 other upstream 2932761 8737175 ~ 8758540 (-)

Expression


Co-expression Network