G1769441


Basic Information

Item Value
gene id G1769441
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 6014800 ~ 6020262 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2026590
ACAAATCTTTATTTACGTATTGTGATGCTGAACTCGAGCAAATCAATTACAAGTAGTGTCTATAGGAAGAAAATATGTTACAGTAAATGTTGCTAAGAGTTTTCTGCCACGGAGAAAGAAGTTATTTGGCTTGAGGGATGACAACTGGgtgaaattatgtgactaaataAAGTATCATCTAAAACCAAAATGTTACAGTAACAATACTAGTACTCCATGTATGGGGACTTGATACCTGTGACATTCACCTCTTTCACTGTGAGAGCCAATGTGTGGTGAGCTTTTCTGGCATAAAATGGATGCTGTGCATCACCCAGGTTGGTGTGCTACTGTACACAATGGTAGCAGGTGGGGTGCGTTACTCCCATGCAATGTAAAGCACCTTGAAGCTTATTGAAAAGCactgacattttttaaaattgtgtctgtattttttttttcaaacaagAAAAAACTCAAATTTTAGTCACATTTTAATCGTAATCTCTACATATTGTACACACAAATTTAAAGTTTGGCACTTTTTTCAGTACTGTGATATCTATAAGAGGAAACACCATCCATGCATGGACGAGCACATACCATAGATACTGTATTACAGATAGAAGGCTTATAATTTCATTAtataatgtgtaaatatttcatACTTCTATATTTCATCATCTAAGACATATGCCTTCTTCCTACTCCATAGGTTCCATGTTTCAAAGTTCAAACACTTTTCATTAGACAATGAAACACCATGGAATATTTATAGGAAGGCCTTCTTTCTTGCTGCGCTTTCCCGCTAAAGCTTTGTTGAGAAAATTTGAATTTCCGTTACAGGCATTGTATTTTTCCTTTGTTTACCAGACCTCCGTAATGACCAACAGCACTTCCCTTGCATAGTTTTTACATGAGAACAAATAGGTTGGAGATATACTGGGGCAATGTAGGGTTCAACTTCAAGATCAAAAGTGGTATTTCATGTGTTTACCTGGGATGTGAACCCGGGACATATTTCTGTCATGAAAATGTGACAAATGGTGGCCCTGGTTGCAATGCCATGATATTTTACACTTTAAGTATAGCTTGTGGTAAAAAATGAAAGGCCATGCATGTGCTCAAAGAGGTGGACACACTTCTCTGTTCAACTTATGCCTCCCCTCAAAAATCATCCCTTATTTGTTCTgattctccccctttctccagAAGTGTGCCTTTCCAATCTCCCAGGCATAGATTTCGAATAATTCAATTGGTGTTGGCATTAGCTGGAGGGAGTTTCCACCATTGTTAAATCCATGACCAAAAATCTCAACTTCGaagtcggcccaccacctcaagctctaACTCGTCAAGACAGAACTGCTCTTCCTCCCAGAAAAGGCCTGCCtgctcaaagacctctccatcacagttGACAACGCCACAGTGTAGGCTCTGGTGACCAGCAAGAAGttacattatgctggcttgcaaagtgatgtttaATTCATATTGGAATCCATCCAGAGTggattcagaatgactgccagtgTCAGAAAGATAAACATAATTAGACTAAACTCGAACAACCATTTCAGTCAcgggtgcaataaatccaacTAAAAGATTGGATTAATTtagttatttatctttgtgtagcaaaACATAAATTAATGTATTCCTtaaccaatcaatgtacatgcaacaCAGATATTGAAAACAACTCAAATCTAACTGcaatgctgggaaatatgatactGAGGGGCGTGGTTTTGCCAACCAGTAAAATTATGATTACTTTGGTGTCAACCTCACTTGGGATTTGACCTCACAACTTCTCAGTTGCCAGCAACCTGAATTTGCTGCTACAATACTGGATCTGTTCATGTGACTATGGTTGTAgtggtcatgaaattttgtcagctggttattgtcatgcgaaagactgccggtctcacagtaattgacgGTTAAGTAAcaaacatgtttagcatctccatgcCTCCACTCATACAAGTTGCTGATGCtcgcctttggaacatctacatttaaagtCTAATAAATGCTTTTAATATGCACTATCACAATAAATCTATTGTATTTTAGACAGCTCTGAAGAAACATGACTTGAAGaaaatttgtttcaaaatgtccCAAATTATTGGCTACTGTGCctgcagaaagtattcacaccccttgactttctccacattttgttacaaagtAAGTTAATGTTTAAATGTCAACTTACTGTCAGCTTGCTGCAAGTAGTAATTGTAGAATTCACAGAAACTTACTTTGGCTGGCTTCTGTCACACTCATTGACCTGATTGTGTGGCAGGAAGGTCAGTTTGCTGCCAACCTAGATGTTGATGCCAGGTGAGGCTGGGTCCCAAGTGTGCTCATGCAAAAGACTACTGCGTTTTACAATACCTTAACTGGCAACCTAACTGTCAGTATGTTCCTAGCAGTTGCTGTGAATTTTACAATAACTGACAGCTGTTTGCCAATTCAGCGGCACAAAATTCAGTAATATCCATATAACTAACTTCCATTAATTTACTGTAAAATACAAAGTAACCTTTTAACAGTACAGCTCTTATTTAATGTCACATGCTCTTACAACAACTGCACAACTGACCATGTTAAAAGAGGTATTCAACCTTTGACGACAACCATCAACCACTTAAACTGGTACAACACTTCCACTGATGGTTGGCACAAAACACATATTAGACCATgccccaaaatatattttcttgacaagtcagttaggaacaaattctaattttcaatggcccagaaacagtgggttaactgccttgttcaggagaagaatgacagatttttaccttgtcagcttggggatttgatcttgcaacctttcggttacaaatccaatgctctaaccactaggctacctgccgccccagaccACTGGTACGtttcagagatgaggtagtcattcaaaaatcacgttaaacacaatgcacacagagtgagtccatggatcttattatgtgacttgttaagcaaatctttactcccaaacttattttggcttgccataacaaaggggttgatttACTTATTGACttaaaacatttcagcttttaatttgtattgaatttgtaaaaaaaaacgtaaaaacataatttcactttgacattatggtgcATTGTGTAAGGCCAGTCACAAAAGAAATCACAATGTcatccatttaaaattcaggctgaacaaaatggggaaaaggtcaaggggtgtgaatactttctgaatgtacatGTTCTTGGTACCAAAGATGTACCTGGTGGCACTGCTGAAACATTAATGCACTTCTGCCTAAAGGCCTctaagttcaaatccccaaagcATTTATGCACACATTACATCAAGTGTCCCTGAGTACTGATATTTTCACATTGGTGTTGTCAGATAATTATACAATTATTGACTTGATTCTGGGCTTCTAGCAGTGTACAGAACTGTGTTCTTGCCATTTAAATATGTGGCCAAGCTCTGTCATGACATAGAGCTGGTGGTGTAGCAGGAAGTTCAGGTCATTAGCAACAAAGAGTTTGAGTTCAAATCCCAAGTGAGGTATAGTCTTAGGTAACCAGCATTCAACAGCATACTGTCCTTTTACAGCAATAACACCTTCATTCAGCTGTAGAAATTCAGTAACTTGTTGTGTACCATGCAATTAAAGGAACTTTGCAACAGTGTAGCATTTCATGGCATAAAAGGAAAACACTGTGGAGAGGGAATTCTTAATATGAAAAATAAAATTACCCTAAGCCCTGgcaaataaccttttttttcttcttgggAGTGTATGCTGGtccagcatggtctagctggaCAAGCTGGTCTGCTAAACTACGgtcatcattatcatatttcccagaatGCTATATTGCAGTTTGATTTTCTCGAAaagtttgtttcaatatctgtgtttttgcatgtacattgattgttttaattaatcaattaatgtatcttatgctacacaaagatacatAACATACATACTAATCCAATATCTTAGTTGAACTTATTTCACCCGTTACTGAAACTGTTCCAGTTTAGGTGGTGAACATTATTTTGTAGTAAGGGTTACATTGAGAAAATGGGATCTTTCTGAAATGAATATGGACAGTTCATCAGTTACATTTCAATTAAACCCTCCCTGAATGCTTGAAAAAAAAGTGAATCTCCCTTATAccccaaataataataataatttaaacaaAAGTGGATAGCGGAGAACATGTCTATACCATTTATCCTCTCAtcttggacagaccagagccttttAGAAACAGTTTTAGAAAGTGTTCTTCTTCctgtaagcattacatggcaaTGCAGGAATTTTGATAGCCCACAGGGCTGctggccagaaggttgtgggttcacagCCCACCGTGGAAGAGAGTAGGGGGGGAAAGATCTCctttatagtaaaagcattgcaTGAATCTATCATTGTATTTGCAGGTCTGAGAAAAAAATTGCccttttctgtggcttaacccaaCAAGAGATGGTCACAACGGTTTCCCTAAAAGTTGTCTGTGTTTAAACATTTATTGTACAGAAAGTTAATCGCCTAATCAATTGATAGAGAGAATTAGaattacttcccaagcaaagtatATTTTTTGGGTCCTTGGCTATAGAAGGTTGTGtctcagcctctgaatgtcaaagacACGAAACAATGCATATTGTAAAGCATCAAGGACCAAAGCGCTCTCATATATATCACGTTATATAATCGGATCAGTTTTAAAATATTAAACTAACAAGAGGTAAGCTTGTGCTTTTTGCCATTTTCTTTCATAAAAAGTAGGGCTATGGCATACCCTCATACCCCCTTCACTGACATGGAATTGACTGACAAATATATCTATATAGCAGCCTATTGCCTAATTTAATCTGCCAAACAGGTAGGCCGacctcttatttcttaaatatgaataaataggctccaacacaaagccctcttgttgttagtaaAGTCAAATTAATTATGCCTACTCAAatttgcctactttcagcaccattAGCTGTCAATTTCCAATTGATTGTGCCCCGGCTGCTGTTTCAAGTTTCAGTCACCACAATCGAATCTGGCTGATTGTGAGGCCAATAACTCTGATCAATACGCTTTCAGAATGGAAAAGtaacattgtttttaataaaataaattataGTAGTAGCAAGCAATCAAAGTTGACCTCTGGTCCTCGTCATCTTTGagctctccttctcaaactgaactgAACAGAACAAAAGCTTAAGGATAGTTCGCACGCAGGAGTGCATTTTTGGATTAGGCCTAATCAAAAATCATTTTTagaaaaagcctttgactctcctcctgaacTGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2026590 True 5365 lncRNA 0.38 2 6014800 6020262

Neighbor

gene id symbol gene type direction distance location
LOC118943574 NA coding upstream 107901 5906162 ~ 5906899 (+)
obsl1b LOC106581677 coding upstream 275015 5668212 ~ 5739785 (+)
LOC118943573 NA coding upstream 817404 5191929 ~ 5197396 (+)
LOC110501275 LOC106581666 coding upstream 895088 5023900 ~ 5119712 (+)
LOC110501273 LOC106581650 coding upstream 1238902 4763021 ~ 4775898 (+)
LOC118943575 NA coding downstream 104024 6124286 ~ 6128819 (+)
LOC110502039 LOC106581999 coding downstream 1313447 7333709 ~ 7339054 (+)
LOC118936580 NA coding downstream 1373377 7393639 ~ 7417439 (+)
LOC110501293 LOC106582013 coding downstream 1405025 7425287 ~ 7447727 (+)
LOC110501294 LOC106582012 coding downstream 1432791 7453053 ~ 7472601 (+)
G1769435 NA non-coding upstream 6181 5995657 ~ 6008619 (+)
G1769422 NA non-coding upstream 61878 5952706 ~ 5952922 (+)
G1769419 NA non-coding upstream 65171 5949417 ~ 5949629 (+)
G1769410 NA non-coding upstream 69972 5944552 ~ 5944828 (+)
G1769409 NA non-coding upstream 72205 5942351 ~ 5942595 (+)
G1769467 NA non-coding downstream 39890 6060152 ~ 6060452 (+)
G1769471 NA non-coding downstream 42950 6063212 ~ 6063431 (+)
G1769489 NA non-coding downstream 84491 6104753 ~ 6174707 (+)
G1769748 NA non-coding downstream 208462 6228724 ~ 6228949 (+)
G1769833 NA non-coding downstream 269822 6290084 ~ 6290310 (+)
G1769403 NA other upstream 78008 5936370 ~ 5936792 (+)
G1769230 NA other upstream 189502 5800515 ~ 5825298 (+)
ppp2r3b LOC106581654 other upstream 1452653 4501681 ~ 4562208 (+)
G1764876 NA other upstream 3572292 2441073 ~ 2442508 (+)
G1764378 ebi2 other upstream 3986397 2016109 ~ 2028403 (+)
G1769461 NA other downstream 37017 6057279 ~ 6057582 (+)
G1769469 NA other downstream 41033 6061295 ~ 6061739 (+)
G1770757 NA other downstream 1214312 7234574 ~ 7282742 (+)
G1771131 LOC106581993 other downstream 1303373 7323635 ~ 7326020 (+)

Expression

G1769441 Expression in all Baseline Samples

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G1769441 Expression in each Bioproject

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G1769441 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 60.
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Co-expression Network