XLOC_037053


Basic Information

Item Value
gene id XLOC_037053
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 19228819 ~ 19229066 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074891
GGACCTCAACTTGCAggactatatttttttcttgataatcttcCTCGTCACTACTACTTGAATGACCATCGTCATGCAATTTTCTGAGGAGTCCATTCCTCCTCATCATCTTCCCCTAGCTGCTCTATGTTACTTTAATTGCTATCCATTAAAATGAGCTCTGGACTCATTATATGTATTGCAAAAAGTCTTCCACTGATGAAATGCTAGAGGAAACTACAGAACAAATAAATCtgtagagaaaaaaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074891 True 248 lncRNA 0.37 1 19228819 19229066

Neighbor

gene id symbol gene type direction distance location
XLOC_037052 crfb1 coding upstream 95818 19095023 ~ 19133001 (+)
XLOC_037051 chmp2ba coding upstream 170862 19039608 ~ 19057957 (+)
XLOC_037050 NA coding upstream 313832 18911697 ~ 18914987 (+)
XLOC_037049 gtf2f2b coding upstream 323502 18829360 ~ 18905317 (+)
XLOC_037048 serp2 coding upstream 507403 18716485 ~ 18721416 (+)
XLOC_037054 htr1fa coding downstream 19058 19248124 ~ 19308435 (+)
XLOC_037055 AL935292.2 coding downstream 97033 19326099 ~ 19383526 (+)
XLOC_037056 slc37a1 coding downstream 138393 19367459 ~ 19410043 (+)
XLOC_037057 pde9a coding downstream 192775 19421841 ~ 19477248 (+)
XLOC_037058 si:ch211-140m22.7 coding downstream 260238 19489304 ~ 19510927 (+)
XLOC_037047 BX957328.1 non-coding upstream 620550 18605460 ~ 18608269 (+)
XLOC_037045 BX004817.2 non-coding upstream 878336 18350367 ~ 18350483 (+)
XLOC_037044 BX004817.1 non-coding upstream 912299 18316403 ~ 18316520 (+)
XLOC_037042 BX248332.1 non-coding upstream 1064792 18163629 ~ 18164027 (+)
XLOC_037062 NA non-coding downstream 566088 19795154 ~ 20053449 (+)
XLOC_037063 NA non-coding downstream 569185 19798251 ~ 19810178 (+)
XLOC_037064 CR933734.1 non-coding downstream 592391 19821457 ~ 19823614 (+)
XLOC_037065 CR933734.2 non-coding downstream 608317 19837383 ~ 19841055 (+)
XLOC_037066 CR456628.2 non-coding downstream 1157679 20386745 ~ 20392034 (+)

Expression


Co-expression Network