G1771795


Basic Information

Item Value
gene id G1771795
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 7789498 ~ 7867922 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2029148
TAGGGAGCGATGGGGACTCTGTGTCTGATATTCAGATGTGATTCAGGAAGGAGTGTATTCTATGGACCATATTCTCTATCTTAACTCCTGTTCCCACATATATAACAGTAGCATGCAAATGTCATGGTGACCTTTGACATTTCCTTATGACATCCAATGAATTCATTATATCTTTTTGGTATTACTATGGACTGTCTTATGGCTCTTACCACTGTTTCAGTACCCCCTGCTGTATTTTACACACAGGACACAGCATGCCAAGCAAATACAGCATCATCGGTTGTATTTTTAGTATATAGGTATTAATAGGATATTGTATAGGATATGAGATGCCTGTTCTACTCTTTCTAAACAGCATGTATGGTTCATTCCCAGGGTGACGATTTCAACTCTTAGCCTCAGACTTTTTCCCCCATTACGAGATGCACTACAATATTCCTTCAACAGCTAAAAAACAGAAAGATATATTAAAAAACCAGGGGGTTGTCTTTAGCGTTCCGGACCTCACTGAGACCCGAGCGTCAGACTTGAGTATTTAGAGTTTAGAGTTTGTATCAACAAAATCTACTGCCTACAAGCCAACATGGGAAGTCTGTTTTTAGAAACCCCAATGAATTAGTGAAGGTAACCATTGGTCATACTACTCAAAGGACGACGAAATTAGAGTTCTGTGGATTAAATGAAACAGTCAAGCCTCTGTGTTCTAGGACACAAATCTGTGTTCAAAACTCAACTGTGGCGTCTTGTAGGACCAGTAAAAACTCCAGGCCCTAAGCAGAGGCTCACAGTCTTCAATGCCAGTGTCATCAAACCTGGCAGGTCCAGTCTCTGTGTCCCAAGTAGGAAACGTTTGTTTCAAACAACACCAATATCCTTTACCACATATCCTGCCTTGCTCTTCCGTGCGCTAATAGCTATTTTTGTGATTCCTCTCTCCCCGCTGTTATTGTTACAATATATGGAATATACTGGTTTgtgttatttatatatttataaaaaTGATTTGTTTATGGTCCGTAAATTATTTTGTATAACGTATGtgatttttaaattattttatttcactgtgTATGTAAATGTTTACAACTGATTTGGGTgaacttagtctctctctctctctctctctctctctctcatgaactGGTATCACTAAAGTTTAATTTACACTGGATATTGAGCGTGGTTTGTTGGGATACATTTTTGCACAATCTCTGTGGCAGAGCATTGAAATGTGTTCAATATGAACAGTTCTGTTTCTGTACTCCCCCTTACCGGCCTACTACCCCCAGTGTGTGTATGACATCATACTGTATGGTGTGGCCTAGTTATCATGCTTGCCATAGATGTGCCAGTACAGTACAACTCATCCATTGTGTAAATCTACCATTTCCGTGTTCAGATAGTGTCAACGGAAAGAGAAACCTAGTCTTGCGGGAGCAGCCATGTGCGATACTTATTCATCAAGACAGGTGGACATGGACAAAAAAAGAATGGACACGTGTCTCTTTTGTACATAGTGGATGCAAATGGAAGAAAATAAGAAGACAAACAGTTGTTATATGAGTATTTGAGCTAAGAATAGGACTGTCCTCATGTTTTGTGTTCTGCTTTGTGACTgcggtaaaaataaaaaaaaatgaaaacagagaggcagggggactGCGATGTTCAACTGTGTCCTCTGTGCTTTCCAATGCTGTATATGACCTGTCCCACACCTGTGATCAAAATGTCTTACCTATTGACCTACCTACAAACGGCACCTACAGAGtatttgttatatatatatacagattgATGTATATGACAAGAGTTCCCAAACGCTGTATCATTGAGTTTTGAATAAATCTGTCATTTGTTAGaaaaaaaaaatctatgaacGCACATAAAAGAGATGTTACTTTCAAGTGGATTGTTTTGGTTTTATTTACCTCGTCCTCTCTTGCTAATGTGGGTAACTACTTCCTGAGATGTGATTGATGGAACAATCCAGTCAATCGTTAGGCGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2029148 True 2009 lncRNA 0.39 2 7789498 7867922

Neighbor

gene id symbol gene type direction distance location
LOC110501302 LOC106582022 coding downstream 52699 7719470 ~ 7736799 (-)
LOC110501300 LOC106582021 coding downstream 120874 7608184 ~ 7668624 (-)
LOC110501299 LOC106582019 coding downstream 192055 7526258 ~ 7597443 (-)
LOC110501297 LOC106582017 coding downstream 264118 7517413 ~ 7525380 (-)
phf11 LOC106582016 coding downstream 289579 7490871 ~ 7499919 (-)
mrpl30 mrpl30 coding upstream 124363 7992285 ~ 7996860 (-)
si:dkey-4e7.3 LOC106582031 coding upstream 215895 8083817 ~ 8092866 (-)
inpp4aa LOC106586779 coding upstream 232823 8100745 ~ 8159515 (-)
mfsd9 mfsd9 coding upstream 294154 8162076 ~ 8173878 (-)
LOC110501321 fhl2 coding upstream 426959 8294881 ~ 8310469 (-)
G1771829 NA non-coding downstream 8912 7780117 ~ 7780586 (-)
G1771827 NA non-coding downstream 9774 7775780 ~ 7779724 (-)
G1771820 NA non-coding downstream 29210 7759887 ~ 7760288 (-)
G1771818 NA non-coding downstream 34114 7755075 ~ 7755384 (-)
G1771809 NA non-coding downstream 47193 7740125 ~ 7742305 (-)
G1771891 NA non-coding upstream 29915 7897837 ~ 7898104 (-)
G1771935 NA non-coding upstream 87525 7955447 ~ 7955656 (-)
G1771942 NA non-coding upstream 118570 7986492 ~ 7986710 (-)
G1771961 NA non-coding upstream 149131 8017053 ~ 8076548 (-)
G1771993 NA non-coding upstream 212330 8080252 ~ 8080793 (-)
G1771426 LOC106582012 other downstream 324806 7462213 ~ 7464692 (-)
G1771092 NA other downstream 532781 7251784 ~ 7256717 (-)
G1769618 NA other downstream 1828683 5960150 ~ 5960815 (-)
G1769281 NA other downstream 1964191 5800761 ~ 5825307 (-)
fgf14 fgf14 other downstream 4015489 3447431 ~ 3774567 (-)
LOC110501323 LOC106581977 other upstream 757100 8624815 ~ 8684792 (-)
LOC110501325 LOC106581976 other upstream 869257 8737175 ~ 8758540 (-)
LOC110502107 grk1 other upstream 895370 8763292 ~ 8768047 (-)
gpr161a gpr161 other upstream 1191054 9044945 ~ 9063520 (-)
G1774133 NA other upstream 1233830 9101752 ~ 9123249 (-)

Expression


Co-expression Network