G1771935



Basic Information


Item Value
gene id G1771935
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 7955447 ~ 7955656 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2029303
GGACAACGGTTAAGggctttgtaagtaagcatttcacggtaaggtctacctacacctgttgtattcggcgcatgtgacaaatacaatttgatttgaaaacggAAAAACGCAATACACAATCTGCATATAATATATGGTAGCCATGGCTCTCGGGCAAAAAAAATCCATGCAGGCAGCCAAGAAGAGGACTATAGTCACAGAGTCCAAATA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2029303 True 210 lncRNA 0.41 1 7955447 7955656

Neighbor


gene id symbol gene type direction distance location
arhgef7a LOC106582025 coding downstream 50352 7791322 ~ 7905095 (-)
LOC110501302 LOC106582022 coding downstream 218648 7719470 ~ 7736799 (-)
LOC110501300 LOC106582021 coding downstream 286823 7608184 ~ 7668624 (-)
LOC110501299 LOC106582019 coding downstream 358004 7526258 ~ 7597443 (-)
LOC110501297 LOC106582017 coding downstream 430067 7517413 ~ 7525380 (-)
mrpl30 mrpl30 coding upstream 36629 7992285 ~ 7996860 (-)
si:dkey-4e7.3 LOC106582031 coding upstream 128161 8083817 ~ 8092866 (-)
inpp4aa LOC106586779 coding upstream 145089 8100745 ~ 8159515 (-)
mfsd9 mfsd9 coding upstream 206420 8162076 ~ 8173878 (-)
LOC110501321 fhl2 coding upstream 339225 8294881 ~ 8310469 (-)
G1771891 NA non-coding downstream 57343 7897837 ~ 7898104 (-)
G1771795 NA non-coding downstream 87525 7789498 ~ 7867922 (-)
G1771829 NA non-coding downstream 174861 7780117 ~ 7780586 (-)
G1771827 NA non-coding downstream 175723 7775780 ~ 7779724 (-)
G1771820 NA non-coding downstream 195159 7759887 ~ 7760288 (-)
G1771942 NA non-coding upstream 30836 7986492 ~ 7986710 (-)
G1771961 NA non-coding upstream 61397 8017053 ~ 8076548 (-)
G1771993 NA non-coding upstream 124596 8080252 ~ 8080793 (-)
G1771994 NA non-coding upstream 125239 8080895 ~ 8081198 (-)
G1771995 NA non-coding upstream 125655 8081311 ~ 8081929 (-)
G1771426 LOC106582012 other downstream 490755 7462213 ~ 7464692 (-)
G1771092 NA other downstream 698730 7251784 ~ 7256717 (-)
G1769618 NA other downstream 1994632 5960150 ~ 5960815 (-)
G1769281 NA other downstream 2130140 5800761 ~ 5825307 (-)
fgf14 fgf14 other downstream 4181438 3447431 ~ 3774567 (-)
LOC110501323 LOC106581977 other upstream 669366 8624815 ~ 8684792 (-)
LOC110501325 LOC106581976 other upstream 781523 8737175 ~ 8758540 (-)
LOC110502107 grk1 other upstream 807636 8763292 ~ 8768047 (-)
gpr161a gpr161 other upstream 1103320 9044945 ~ 9063520 (-)
G1774133 NA other upstream 1146096 9101752 ~ 9123249 (-)

Expression



Co-expression Network