Gene
RNA
| Item | Value |
|---|---|
| gene id | G1772171 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 8391733 ~ 8392296 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2029565 | True | 314 | lncRNA | 0.46 | 2 | 8391733 | 8392296 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501320 | LOC106581986 | coding | upstream | 108272 | 8265832 ~ 8283461 (+) |
| LOC110501318 | pou3f3 | coding | upstream | 133524 | 8254702 ~ 8258209 (+) |
| tmem182a | LOC106581990 | coding | upstream | 202479 | 8182474 ~ 8189254 (+) |
| mgat4a | mgat4a | coding | upstream | 315186 | 8027916 ~ 8076547 (+) |
| creg2 | creg2 | coding | upstream | 364209 | 8025363 ~ 8027524 (+) |
| LOC110502042 | NA | coding | downstream | 43650 | 8435946 ~ 8442043 (+) |
| LOC110501324 | LOC106581978 | coding | downstream | 202860 | 8595156 ~ 8629992 (+) |
| zgc:172067 | LOC106581893 | coding | downstream | 367419 | 8759715 ~ 8763740 (+) |
| dcun1d2a | LOC106581973 | coding | downstream | 392486 | 8784782 ~ 8790324 (+) |
| LOC110501330 | LOC106581972 | coding | downstream | 398605 | 8790901 ~ 8798707 (+) |
| G1772083 | NA | non-coding | upstream | 75173 | 8240569 ~ 8316560 (+) |
| G1771755 | NA | non-coding | upstream | 291715 | 8099801 ~ 8100018 (+) |
| G1771754 | NA | non-coding | upstream | 291966 | 8099323 ~ 8099767 (+) |
| G1771750 | NA | non-coding | upstream | 298310 | 8093199 ~ 8093423 (+) |
| G1772153 | NA | non-coding | downstream | 18974 | 8411270 ~ 8413006 (+) |
| G1772216 | NA | non-coding | downstream | 87658 | 8479954 ~ 8482456 (+) |
| G1772284 | NA | non-coding | downstream | 205472 | 8597768 ~ 8597969 (+) |
| G1772285 | NA | non-coding | downstream | 205955 | 8598251 ~ 8598585 (+) |
| G1772287 | NA | non-coding | downstream | 209194 | 8601490 ~ 8601724 (+) |
| G1771580 | NA | other | upstream | 624225 | 7767065 ~ 7767508 (+) |
| LOC110501294 | LOC106582012 | other | upstream | 919242 | 7453053 ~ 7472601 (+) |
| G1771131 | LOC106581993 | other | upstream | 1065713 | 7323635 ~ 7326020 (+) |
| G1770757 | NA | other | upstream | 1108991 | 7234574 ~ 7282742 (+) |
| G1769469 | NA | other | upstream | 2329994 | 6061295 ~ 6061739 (+) |
| G1772554 | gpr161 | other | downstream | 663409 | 9055705 ~ 9056402 (+) |
| G1772556 | LOC106567841 | other | downstream | 713719 | 9106015 ~ 9122457 (+) |
| LOC110501352 | gpr34 | other | downstream | 992064 | 9384301 ~ 9387652 (+) |
| G1775959 | NA | other | downstream | 3119669 | 11511965 ~ 11516413 (+) |
| G1775962 | LOC100286503 | other | downstream | 3128427 | 11520723 ~ 11522390 (+) |
