Gene
RNA
| Item | Value |
|---|---|
| gene id | G1772153 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 8411270 ~ 8413006 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2029545 | True | 1669 | lncRNA | 0.41 | 2 | 8411270 | 8413006 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501322 | LOC106581983 | coding | upstream | 1200 | 8358225 ~ 8410070 (+) |
| LOC110501320 | LOC106581986 | coding | upstream | 127809 | 8265832 ~ 8283461 (+) |
| LOC110501318 | pou3f3 | coding | upstream | 153061 | 8254702 ~ 8258209 (+) |
| tmem182a | LOC106581990 | coding | upstream | 222016 | 8182474 ~ 8189254 (+) |
| mgat4a | mgat4a | coding | upstream | 334723 | 8027916 ~ 8076547 (+) |
| LOC110502042 | NA | coding | downstream | 22940 | 8435946 ~ 8442043 (+) |
| LOC110501324 | LOC106581978 | coding | downstream | 182150 | 8595156 ~ 8629992 (+) |
| zgc:172067 | LOC106581893 | coding | downstream | 346709 | 8759715 ~ 8763740 (+) |
| dcun1d2a | LOC106581973 | coding | downstream | 371776 | 8784782 ~ 8790324 (+) |
| LOC110501330 | LOC106581972 | coding | downstream | 377895 | 8790901 ~ 8798707 (+) |
| G1772171 | NA | non-coding | upstream | 18974 | 8391733 ~ 8392296 (+) |
| G1772083 | NA | non-coding | upstream | 94710 | 8240569 ~ 8316560 (+) |
| G1771755 | NA | non-coding | upstream | 311252 | 8099801 ~ 8100018 (+) |
| G1771754 | NA | non-coding | upstream | 311503 | 8099323 ~ 8099767 (+) |
| G1772216 | NA | non-coding | downstream | 66948 | 8479954 ~ 8482456 (+) |
| G1772284 | NA | non-coding | downstream | 184762 | 8597768 ~ 8597969 (+) |
| G1772285 | NA | non-coding | downstream | 185245 | 8598251 ~ 8598585 (+) |
| G1772287 | NA | non-coding | downstream | 188484 | 8601490 ~ 8601724 (+) |
| G1772292 | NA | non-coding | downstream | 197275 | 8610281 ~ 8610531 (+) |
| G1771580 | NA | other | upstream | 643762 | 7767065 ~ 7767508 (+) |
| LOC110501294 | LOC106582012 | other | upstream | 938779 | 7453053 ~ 7472601 (+) |
| G1771131 | LOC106581993 | other | upstream | 1085250 | 7323635 ~ 7326020 (+) |
| G1770757 | NA | other | upstream | 1128528 | 7234574 ~ 7282742 (+) |
| G1772554 | gpr161 | other | downstream | 642699 | 9055705 ~ 9056402 (+) |
| G1772556 | LOC106567841 | other | downstream | 693009 | 9106015 ~ 9122457 (+) |
| LOC110501352 | gpr34 | other | downstream | 971354 | 9384301 ~ 9387652 (+) |
| G1775959 | NA | other | downstream | 3098959 | 11511965 ~ 11516413 (+) |
| G1775962 | LOC100286503 | other | downstream | 3107717 | 11520723 ~ 11522390 (+) |
