XLOC_037064 (CR933734.1)


Basic Information

Item Value
gene id XLOC_037064
gene name CR933734.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 19821457 ~ 19823614 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072949
TTATTTTTTTCAAACGAGGGAGTGAAGTCAAGTCCGCCATTTCATCTTCTTCTTTATATCggAAAAGAAAGGAATCATGCAAGGATGCAAGCTGAAGGAAAGGACAACTATCACATCAGTGCATTACTAATTGTTTGACTTCATCATCAAGCACACCagGCAGTGCGGTGGAACAGTGGATAGCTCTGTTGCCTCCCAGCAAAAATGTttttggttcgagcctcggctgggtcagttggcatttctgtgtgtagtttgtatgttctccccgtgttggcgtgggtttcctccgggtgctcctgtttcccccacaagacatgcggtacagctcagattgtgatggacctggaatgcgacacca
>TCONS_00072950
AAACGAGGGAGTGAAGTCAAGTCCGCCATTTCATCTTCTTCTTTATATCggAAAAGAAAGGAATCATGCAAGGATGCAAGCTGAAGGAAAGGACAACTATCACATCAGTGCATTACTAATTGTTTGACTTCATCATCAAGCACACCagGCAGTGCGGTGGAACAGTGGATAGCTCTGTTGCCTCCCAGCAAAAATGTttttggttcgagcctcggctgggtcagttggcatttctgtgtgtagtttgtatgttctccccgtgttggcgtgggtttcctccgggtgctcctgtttcccccacaagacatgcggtacaggtgaattgggtaagctaaattgtccttagtgaatgtgtgtaaatgagagtgtatgggtttttcccag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093419

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072949 False 361 processed_transcript 0.47 4 19821457 19823614
TCONS_00072950 True 384 lncRNA 0.46 3 19821468 19823246

Neighbor

gene id symbol gene type direction distance location
XLOC_037063 NA coding upstream 11279 19798251 ~ 19810178 (+)
XLOC_037061 pdxka coding upstream 167999 19623363 ~ 19653458 (+)
XLOC_037060 pknox1.1 coding upstream 271399 19529951 ~ 19550058 (+)
XLOC_037059 ndufv3 coding upstream 293419 19518674 ~ 19528038 (+)
XLOC_037058 si:ch211-140m22.7 coding upstream 310530 19489304 ~ 19510927 (+)
XLOC_037065 CR933734.2 coding downstream 13769 19837383 ~ 19841055 (+)
XLOC_037066 CR456628.2 coding downstream 563131 20386745 ~ 20392034 (+)
XLOC_037067 CR456628.1 coding downstream 610198 20433812 ~ 20436515 (+)
XLOC_037068 parp4 coding downstream 660232 20483846 ~ 20502622 (+)
XLOC_037069 vtcn1 coding downstream 696232 20519846 ~ 20524673 (+)
XLOC_037053 NA non-coding upstream 592391 19228819 ~ 19229066 (+)
XLOC_037050 NA non-coding upstream 906470 18911697 ~ 18914987 (+)
XLOC_037047 BX957328.1 non-coding upstream 1213188 18605460 ~ 18608269 (+)
XLOC_037045 BX004817.2 non-coding upstream 1470974 18350367 ~ 18350483 (+)
XLOC_037077 NA non-coding downstream 1378658 21202272 ~ 21205472 (+)
XLOC_037078 pla1a non-coding downstream 1391326 21214940 ~ 21226132 (+)

Expression


Co-expression Network