Gene
RNA
| Item | Value |
|---|---|
| gene id | G1775080 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 10793714 ~ 10798821 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2032835 | False | 462 | lncRNA | 0.41 | 2 | 10793714 | 10798821 |
| TU2032837 | True | 462 | lncRNA | 0.41 | 2 | 10793714 | 10798821 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501376 | LOC106581931 | coding | downstream | 242217 | 10502550 ~ 10551497 (-) |
| calcrla | LOC106581932 | coding | downstream | 295537 | 10439675 ~ 10498177 (-) |
| vwa8 | vwa8 | coding | downstream | 557685 | 10142947 ~ 10236029 (-) |
| slc35a5 | slc35a5 | coding | downstream | 711915 | 10069543 ~ 10081799 (-) |
| LOC118943578 | NA | coding | downstream | 881371 | 9878934 ~ 9912343 (-) |
| LOC110501381 | NA | coding | upstream | 178452 | 10977273 ~ 10984214 (-) |
| igfbp5 | igfbp5 | coding | upstream | 240680 | 11039501 ~ 11054592 (-) |
| tns1b | LOC100286503 | coding | upstream | 688087 | 11486908 ~ 11791569 (-) |
| LOC110501383 | LOC106581884 | coding | upstream | 1017429 | 11816250 ~ 11819211 (-) |
| fkbp7 | fkbp7 | coding | upstream | 1040755 | 11839576 ~ 11844296 (-) |
| G1775003 | NA | non-coding | downstream | 102774 | 10667720 ~ 10690940 (-) |
| G1774927 | NA | non-coding | downstream | 184799 | 10583036 ~ 10608915 (-) |
| G1774889 | NA | non-coding | downstream | 291724 | 10501773 ~ 10501990 (-) |
| G1774843 | NA | non-coding | downstream | 358329 | 10434944 ~ 10435385 (-) |
| G1775227 | NA | non-coding | upstream | 77775 | 10876596 ~ 10876820 (-) |
| G1775228 | NA | non-coding | upstream | 78435 | 10877256 ~ 10877554 (-) |
| G1775229 | NA | non-coding | upstream | 79193 | 10878014 ~ 10878473 (-) |
| G1775246 | NA | non-coding | upstream | 103534 | 10902355 ~ 10902633 (-) |
| G1775250 | NA | non-coding | upstream | 106576 | 10905397 ~ 10905596 (-) |
| fundc1 | fundc1 | other | downstream | 1055858 | 9635535 ~ 9737896 (-) |
| rpl8 | LOC106586796 | other | downstream | 1501739 | 9289279 ~ 9291975 (-) |
| G1774133 | NA | other | downstream | 1670465 | 9101752 ~ 9123249 (-) |
| gpr161a | gpr161 | other | downstream | 1730513 | 9044945 ~ 9063520 (-) |
| LOC110502107 | grk1 | other | downstream | 2025667 | 8763292 ~ 8768047 (-) |
| G1777196 | LOC100136012 | other | upstream | 1042252 | 11841073 ~ 11843059 (-) |
| G1777286 | NA | other | upstream | 1242287 | 12041108 ~ 12041622 (-) |
| G1777441 | LOC106581914 | other | upstream | 1469396 | 12268217 ~ 12270114 (-) |
| LOC110501411 | LOC106581904 | other | upstream | 1821761 | 12620582 ~ 12624860 (-) |
| G1778140 | efnb2 | other | upstream | 2369959 | 13168780 ~ 13172979 (-) |
