Gene
RNA
| Item | Value |
|---|---|
| gene id | G1775285 |
| gene name | LOC106581928 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 10956422 ~ 10956652 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| anion exchange protein 3-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2033046 | True | 231 | lncRNA | 0.58 | 1 | 10956422 | 10956652 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| col5a2a | LOC106581929 | coding | downstream | 115890 | 10775267 ~ 10840532 (-) |
| LOC110501376 | LOC106581931 | coding | downstream | 404925 | 10502550 ~ 10551497 (-) |
| calcrla | LOC106581932 | coding | downstream | 458245 | 10439675 ~ 10498177 (-) |
| vwa8 | vwa8 | coding | downstream | 720393 | 10142947 ~ 10236029 (-) |
| slc35a5 | slc35a5 | coding | downstream | 874623 | 10069543 ~ 10081799 (-) |
| LOC110501381 | NA | coding | upstream | 20621 | 10977273 ~ 10984214 (-) |
| igfbp5 | igfbp5 | coding | upstream | 82849 | 11039501 ~ 11054592 (-) |
| tns1b | LOC100286503 | coding | upstream | 530256 | 11486908 ~ 11791569 (-) |
| LOC110501383 | LOC106581884 | coding | upstream | 859598 | 11816250 ~ 11819211 (-) |
| fkbp7 | fkbp7 | coding | upstream | 882924 | 11839576 ~ 11844296 (-) |
| G1775284 | NA | non-coding | downstream | 1265 | 10954955 ~ 10955157 (-) |
| G1775282 | NA | non-coding | downstream | 3731 | 10952237 ~ 10952691 (-) |
| G1775254 | NA | non-coding | downstream | 45287 | 10910824 ~ 10911135 (-) |
| G1775250 | NA | non-coding | downstream | 50826 | 10905397 ~ 10905596 (-) |
| G1775246 | NA | non-coding | downstream | 53789 | 10902355 ~ 10902633 (-) |
| G1775286 | NA | non-coding | upstream | 97 | 10956749 ~ 10956995 (-) |
| G1775291 | NA | non-coding | upstream | 7679 | 10964331 ~ 10964704 (-) |
| G1775292 | LOC106581928 | non-coding | upstream | 9372 | 10966024 ~ 10966273 (-) |
| G1775300 | NA | non-coding | upstream | 15867 | 10972519 ~ 10973019 (-) |
| G1775302 | NA | non-coding | upstream | 16627 | 10973279 ~ 10977222 (-) |
| fundc1 | fundc1 | other | downstream | 1218566 | 9635535 ~ 9737896 (-) |
| rpl8 | LOC106586796 | other | downstream | 1664447 | 9289279 ~ 9291975 (-) |
| G1774133 | NA | other | downstream | 1833173 | 9101752 ~ 9123249 (-) |
| gpr161a | gpr161 | other | downstream | 1893221 | 9044945 ~ 9063520 (-) |
| LOC110502107 | grk1 | other | downstream | 2188375 | 8763292 ~ 8768047 (-) |
| G1777196 | LOC100136012 | other | upstream | 884421 | 11841073 ~ 11843059 (-) |
| G1777286 | NA | other | upstream | 1084456 | 12041108 ~ 12041622 (-) |
| G1777441 | LOC106581914 | other | upstream | 1311565 | 12268217 ~ 12270114 (-) |
| LOC110501411 | LOC106581904 | other | upstream | 1663930 | 12620582 ~ 12624860 (-) |
| G1778140 | efnb2 | other | upstream | 2212128 | 13168780 ~ 13172979 (-) |
