XLOC_037074 (hao2)


Basic Information

Item Value
gene id XLOC_037074
gene name hao2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 21146862 ~ 21164617 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072971
GTTGTACTGTCCTACCTGAACACATGTGGCAGGAAAAAACAGACATCAGAAGCAAATCAAGATATTCAGTGACAAGACGGTGTCCATTTTTCACATGCAGAGATGGAGCGCCATAAAAGAATGAACTTACTGGGCTCTAGCAGagAAGAAGGCGTCTGTGCAGAAATGGCTATGGTATGTCTGGATGATTTTGAGGAATATGCGAAGCAGCACCTCTCAAAGTCTACATGGGACTATTACGAAGCTGGAGCTGATGAATGTTGCACCCGAGACGACAACTTGCAGGCCTATAAAAGGATTCGCTTGAGGCCACGGATCTTGCGTGACGTGTCGATCAATGACACTCGGACCTCTGTGCTGGGACGGGAAATAAGCTTTCCTGTTGGAATTGCACCCACAGCTTTCCACTGCCTGGCCTGGCATGAGGGAGAACTGGCCACTGCCAGAGCTACTGAGGCGTTGAACACATGTTATATAGCCAGCACTTACGCCACATGTTCAGTGGAGGAGATCGCAGCAGCAGCACCCAACGGCTACCGCTGGTTCCAGCTGTACTTGTACCGCGACCGGAAGCTTTCGGAGCAGATTGTACACAGAGTGGAGGCTCTTGGCTATAAGGCTCTGGTGCTTACAGTAGACGTGCCTTACACTGGCAAACGTCGCAATGATATACGCAACCAGTTCAAGCTACCACCACACCTGAAGGTCAAGAACTTTGAGGGGATGTTCCAGGAGCAAACAGAAGCCCAGGAGGAATACGGGATCCCAGCTAA
>TCONS_00072972
AAAGAAGTAACTTATTGAGCACATCGGCCGGAAACAACTAATCAACGTGCGGATGCCACAATCAAAGGCTAGTTCATGTGTGAACTAAACTGTGGTTGATGGTTGCAGAGTTAAAGAGTCAAAATAGagAAGAAGGCGTCTGTGCAGAAATGGCTATGGTATGTCTGGATGATTTTGAGGAATATGCGAAGCAGCACCTCTCAAAGTCTACATGGGACTATTACGAAGCTGGAGCTGATGAATGTTGCACCCGAGACGACAACTTGCAGGCCTATAAAAGGATTCGCTTGAGGCCACGGATCTTGCGTGACGTGTCGATCAATGACACTCGGACCTCTGTGCTGGGACGGGAAATAAGCTTTCCTGTTGGAATTGCACCCACAGCTTTCCACTGCCTGGCCTGGCATGAGGGAGAACTGGCCACTGCCAGAGCTACTGAGGCGTTGAACACATGTTATATAGCCAGCACTTACGCCACATGTTCAGTGGAGGAGATCGCAGCAGCAGCACCCAACGGCTACCGCTGGTTCCAGCTGTACTTGTACCGCGACCGGAAGCTTTCGGAGCAGATTGTACACAGAGTGGAGGCTCTTGGCTATAAGGCTCTGGTGCTTACAGTAGACGTGCCTTACACTGGCAAACGTCGCAATGATATACGCAACCAGTTCAAGCTACCACCACACCTGAAGGTCAAGAACTTTGAGGGGATGTTCCAGGAGCAAACAGAAGCCCAGGAGGAATACGGGATCCCAGCTAATACTCTGGACCCATCGATCAGCTGGAAGGATGTTTGCTGGCTCCAGTCTCTGACACGGCTGCCTATTATTATCAAGGGCATCCTCACTAAAGAGGACGCAGAGCTGGCTGTAGAGCATGGCGTCCAGGGCATAATTGTGTCTAATCATGGTGGCCGGCAACTGGATGGAGGGCCAGCAACGATAGATTGTCTGCCTGAGATAGTGGACACAGTGCAGGGCCGGGTCGAGGTCTACATGGACGGAGGGATCCGTACAGGCAATGACGTGCTGAAGGCCATAGCCTTGGGAGCCAGATGTGTGTTTATTGGCAGGCCGGCAATCTGGGGCCTCGCTTACAAGGGGGAGGATGGAGTGAAAGAAATCTTAAATATTCTACATGATGAGTTTCGCTTATCCATGGTGTTGGCAGGCTGCAGAAATGTTGCTGAGATCAACAGGAACCTCATTCAGTTCTCCAGACTTTGAGAAGCAAAATGGACTATAATAATTTCTACTTTAACACTACAAAGATCCATATACTATTACTAAATGTACACAAGAAAACTCTGTTGCTTTTAGTCGCAAGAATAGCATATCTacaattgttaacagtgtattgATGGTTTTAATACTTGTTTTTCAGTAAGCATCAAGAACAGAACCGGGAAATCCCCACACTATTTTTATTGAGAGAATCAAGAGTGAATTATCTTAAAACCTTCACTCATTACAGATTGCTTCAAATCAGCTTCACAACAGTAAATAACAAAATAGAATTGGTATTAGGTACAATTTAATTCATGATTATGAATAAATCACTTCTAATTTATCTATAAAGCAGCCAtacacaagataaaagtttgaTCAAGGCATATGCTAAAAGAAAAGCTTCTTATTAATAAGCTAAGTGATCGGTTTTAATAAATACTGAACATCCAGTTAATATTTGGTCAAAATAACAAGTgtggcaaaattaaacaacatgtAATTCTTTAACTGACTGTGTGttaatattttaagttatattatttACTTTACAATAAATACTACGCTCTTTC
>TCONS_00072973
AGGCTTTTGACTGCCAACGATAGTTGGCTGAAAACACCAGAGCAGTCCACTGTGCTGTGACCTAAATTTGTCTAAATCTAAAAGagAAGAAGGCGTCTGTGCAGAAATGGCTATGGTATGTCTGGATGATTTTGAGGAATATGCGAAGCAGCACCTCTCAAAGTCTACATGGGACTATTACGAAGCTGGAGCTGATGAATGTTGCACCCGAGACGACAACTTGCAGGCCTATAAAAGGATTCGCTTGAGGCCACGGATCTTGCGTGACGTGTCGATCAATGACACTCGGACCTCTGTGCTGGGACGGGAAATAAGCTTTCCTGTTGGAATTGCACCCACAGCTTTCCACTGCCTGGCCTGGCATGAGGGAGAACTGGCCACTGCCAGAGCTACTGAGGCGTTGAACACATGTTATATAGCCAGCACTTACGCCACATGTTCAGTGGAGGAGATCGCAGCAGCAGCACCCAACGGCTACCGCTGGTTCCAGCTGTACTTGTACCGCGACCGGAAGCTTTCGGAGCAGATTGTACACAGAGTGGAGGCTCTTGGCTATAAGGCTCTGGTGCTTACAGTAGACGTGCCTTACACTGGCAAACGTC

Function

symbol description
hao2 Predicted to enable FMN binding activity and oxidoreductase activity. Is expressed in lens; liver; pronephric duct; solid lens vesicle; and yolk syncytial layer. Orthologous to human HAO2 (hydroxyacid oxidase 2).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0010181 FMN binding molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1239 Predicted to enable FMN binding activity and oxidoreductase activity. Is expressed in lens; liver; pronephric duct; solid lens vesicle; and yolk syncytial layer. Orthologous to human HAO2 (hydroxyacid oxidase 2).

Ensembl:

ensembl_id ENSDARG00000027992

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072971 False 773 mRNA 0.50 6 21146862 21160772
TCONS_00072972 False 1795 mRNA 0.44 8 21148318 21164617
TCONS_00072973 True 602 mRNA 0.51 4 21151138 21154838

Neighbor

gene id symbol gene type direction distance location
XLOC_037073 wdr3 coding upstream 274297 20853894 ~ 20872565 (+)
XLOC_037072 tent5c coding upstream 362815 20780813 ~ 20784047 (+)
XLOC_037071 man1a2 coding upstream 379089 20554178 ~ 20767773 (+)
XLOC_037070 trim45 coding upstream 607582 20526472 ~ 20539280 (+)
XLOC_037069 vtcn1 coding upstream 622189 20519846 ~ 20524673 (+)
XLOC_037075 si:rp71-68n21.9 coding downstream 400 21165017 ~ 21176861 (+)
XLOC_037076 hsd3b1 coding downstream 29828 21194445 ~ 21200464 (+)
XLOC_037077 NA coding downstream 37655 21202272 ~ 21205472 (+)
XLOC_037078 pla1a coding downstream 50323 21214940 ~ 21226132 (+)
XLOC_037079 hcn5 coding downstream 78718 21243335 ~ 21257516 (+)
XLOC_037067 CR456628.1 non-coding upstream 710347 20433812 ~ 20436515 (+)
XLOC_037066 CR456628.2 non-coding upstream 754828 20386745 ~ 20392034 (+)
XLOC_037065 CR933734.2 non-coding upstream 1305807 19837383 ~ 19841055 (+)
XLOC_037064 CR933734.1 non-coding upstream 1323248 19821457 ~ 19823614 (+)
XLOC_037063 NA non-coding upstream 1336684 19798251 ~ 19810178 (+)
XLOC_037086 BX649266.2 non-coding downstream 331256 21495873 ~ 21496699 (+)
XLOC_037089 NA non-coding downstream 597079 21761696 ~ 21765735 (+)
XLOC_037095 CR536604.1 non-coding downstream 819492 21984109 ~ 21985996 (+)

Expression


Co-expression Network